RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 SPTBN5Q9NRC6 3674 aaKnown RBP-4.33□□□□□ -3.1
LMBR1-222ENST00000638959 IGLC7A0M8Q6 106 aa-4.33□□□□□ -3.1
LMBR1-222ENST00000638959 SIX6O95475 246 aa-4.33□□□□□ -3.1
LMBR1-222ENST00000638959 SMR3BP02814 79 aaPredicted RBP-4.33□□□□□ -3.1
LMBR1-222ENST00000638959 CALML5Q9NZT1 146 aa-4.33□□□□□ -3.1
LMBR1-222ENST00000638959 LSM2Q9Y333 95 aaKnown RBP-4.33□□□□□ -3.1
LMBR1-222ENST00000638959 BTAF1O14981 1849 aa-4.34□□□□□ -3.1
LMBR1-222ENST00000638959 DAPK1P53355 1430 aa-4.34□□□□□ -3.1
LMBR1-222ENST00000638959 A0A087WVE0 104 aa-4.34□□□□□ -3.1
LMBR1-222ENST00000638959 IFNA1P01562 189 aa-4.34□□□□□ -3.1
LMBR1-222ENST00000638959 MT2AP02795 61 aa-4.34□□□□□ -3.1
LMBR1-222ENST00000638959 UBA52P62987 128 aaKnown RBP-4.34□□□□□ -3.1
LMBR1-222ENST00000638959 S100A7L2Q5SY68 101 aa-4.34□□□□□ -3.1
LMBR1-222ENST00000638959 ARHGEF10O15013 1369 aa-4.35□□□□□ -3.11
LMBR1-222ENST00000638959 NIPSNAP2O75323 286 aa-4.35□□□□□ -3.11
LMBR1-222ENST00000638959 TPM3P06753 285 aa-4.35□□□□□ -3.11
LMBR1-222ENST00000638959 AQP10Q96PS8 301 aa-4.35□□□□□ -3.11
LMBR1-222ENST00000638959 CCDC32Q9BV29 185 aa-4.35□□□□□ -3.11
LMBR1-222ENST00000638959 MYH7P12883 1935 aa-4.36□□□□□ -3.11
LMBR1-222ENST00000638959 MGPP08493 103 aa-4.36□□□□□ -3.11
LMBR1-222ENST00000638959 A0A0G2JMZ2 1700 aa-4.37□□□□□ -3.11
LMBR1-222ENST00000638959 RIMS1Q86UR5 1692 aaKnown RBP-4.37□□□□□ -3.11
LMBR1-222ENST00000638959 FAM107AO95990 144 aa-4.37□□□□□ -3.11
LMBR1-222ENST00000638959 BANF2Q9H503 90 aa-4.37□□□□□ -3.11
LMBR1-222ENST00000638959 SFT2D2O95562 160 aa-4.38□□□□□ -3.11
LMBR1-222ENST00000638959 MIC13Q5XKP0 118 aa-4.38□□□□□ -3.11
LMBR1-222ENST00000638959 Q6ZUT4 128 aa-4.38□□□□□ -3.11
LMBR1-222ENST00000638959 SEC11CQ9BY50 192 aa-4.38□□□□□ -3.11
LMBR1-222ENST00000638959 DMXL2Q8TDJ6 3036 aa-4.38□□□□□ -3.11
LMBR1-222ENST00000638959 POLR2HP52434 150 aaKnown RBP-4.39□□□□□ -3.11
LMBR1-222ENST00000638959 GNG3P63215 75 aa-4.39□□□□□ -3.11
LMBR1-222ENST00000638959 SMIM20Q8N5G0 67 aa-4.39□□□□□ -3.11
LMBR1-222ENST00000638959 TTC9CQ8N5M4 171 aa-4.39□□□□□ -3.11
LMBR1-222ENST00000638959 SPRR4Q96PI1 79 aa-4.39□□□□□ -3.11
LMBR1-222ENST00000638959 SPENQ96T58 3664 aaKnown RBP-4.4□□□□□ -3.11
LMBR1-222ENST00000638959 SPAARA0A1B0GVQ0 90 aa-4.4□□□□□ -3.11
LMBR1-222ENST00000638959 HCG22E2RYF7 251 aa-4.4□□□□□ -3.11
LMBR1-222ENST00000638959 H7BZZ5 65 aa-4.4□□□□□ -3.11
LMBR1-222ENST00000638959 PAEPP09466 180 aa-4.4□□□□□ -3.11
LMBR1-222ENST00000638959 TPM4P67936 248 aa-4.4□□□□□ -3.11
LMBR1-222ENST00000638959 CTAGE3PQ8IX95 158 aa-4.4□□□□□ -3.11
LMBR1-222ENST00000638959 CCDC115Q96NT0 180 aa-4.4□□□□□ -3.11
LMBR1-222ENST00000638959 SEC11AP67812 179 aa-4.41□□□□□ -3.12
LMBR1-222ENST00000638959 LCN9Q8WX39 176 aa-4.41□□□□□ -3.12
LMBR1-222ENST00000638959 FAM167A-AS1Q96KT0 104 aa-4.41□□□□□ -3.12
LMBR1-222ENST00000638959 LLPHQ9BRT6 129 aaKnown RBP-4.41□□□□□ -3.12
LMBR1-222ENST00000638959 NCOA3Q9Y6Q9 1424 aa-4.41□□□□□ -3.12
LMBR1-222ENST00000638959 CAMSAP1Q5T5Y3 1602 aa-4.42□□□□□ -3.12
LMBR1-222ENST00000638959 MT-ND4LP03901 98 aa-4.42□□□□□ -3.12
LMBR1-222ENST00000638959 IL5P05113 134 aa-4.42□□□□□ -3.12
LMBR1-222ENST00000638959 TCTAP57738 103 aa-4.42□□□□□ -3.12
LMBR1-222ENST00000638959 PPP1R2P3Q6NXS1 205 aa-4.42□□□□□ -3.12
LMBR1-222ENST00000638959 CFAP53Q96M91 514 aa-4.42□□□□□ -3.12
LMBR1-222ENST00000638959 TPT1P8Q9HAU6 139 aa-4.42□□□□□ -3.12
LMBR1-222ENST00000638959 PARVGQ9HBI0 331 aa-4.42□□□□□ -3.12
LMBR1-222ENST00000638959 DOCK2Q92608 1830 aa-4.43□□□□□ -3.12
LMBR1-222ENST00000638959 TRBV20-1A0A075B6N2 111 aa-4.43□□□□□ -3.12
LMBR1-222ENST00000638959 DHRS4L2Q6PKH6 230 aa-4.43□□□□□ -3.12
LMBR1-222ENST00000638959 THEM6Q8WUY1 208 aa-4.43□□□□□ -3.12
LMBR1-222ENST00000638959 FAIMQ9NVQ4 179 aa-4.43□□□□□ -3.12
LMBR1-222ENST00000638959 LOC100130705A0A1B0GUX0 176 aa-4.44□□□□□ -3.12
LMBR1-222ENST00000638959 TMEM244Q5VVB8 128 aa-4.44□□□□□ -3.12
LMBR1-222ENST00000638959 MYH13Q9UKX3 1938 aa-4.44□□□□□ -3.12
LMBR1-222ENST00000638959 ALKQ9UM73 1620 aa-4.45□□□□□ -3.12
LMBR1-222ENST00000638959 SNCGO76070 127 aa-4.45□□□□□ -3.12
LMBR1-222ENST00000638959 CLPSL2Q6UWE3 100 aa-4.45□□□□□ -3.12
LMBR1-222ENST00000638959 PPP1R14BQ96C90 147 aa-4.45□□□□□ -3.12
LMBR1-222ENST00000638959 CEP19Q96LK0 163 aa-4.45□□□□□ -3.12
LMBR1-222ENST00000638959 PRO1933Q9H354 126 aa-4.45□□□□□ -3.12
LMBR1-222ENST00000638959 DYNLRB1Q9NP97 96 aa-4.45□□□□□ -3.12
LMBR1-222ENST00000638959 QRICH2Q9H0J4 1663 aa-4.45□□□□□ -3.12
LMBR1-222ENST00000638959 TRAV13-2A0A0B4J235 113 aa-4.46□□□□□ -3.12
LMBR1-222ENST00000638959 TAC4Q86UU9 113 aa-4.46□□□□□ -3.12
LMBR1-222ENST00000638959 TLN1Q9Y490 2541 aaKnown RBP-4.46□□□□□ -3.12
LMBR1-222ENST00000638959 MYH6P13533 1939 aa-4.46□□□□□ -3.12
LMBR1-222ENST00000638959 PPIP5K1Q6PFW1 1433 aa-4.46□□□□□ -3.12
LMBR1-222ENST00000638959 C1orf167Q5SNV9 1468 aa-4.47□□□□□ -3.12
LMBR1-222ENST00000638959 IFT140Q96RY7 1462 aa-4.47□□□□□ -3.12
LMBR1-222ENST00000638959 DPM2O94777 84 aa-4.47□□□□□ -3.13
LMBR1-222ENST00000638959 IGLC1P0CG04 106 aa-4.47□□□□□ -3.13
LMBR1-222ENST00000638959 SAR1AQ9NR31 198 aa-4.47□□□□□ -3.13
LMBR1-222ENST00000638959 XRN1Q8IZH2 1706 aaKnown RBP-4.48□□□□□ -3.13
LMBR1-222ENST00000638959 HMGN4O00479 90 aa-4.48□□□□□ -3.13
LMBR1-222ENST00000638959 PFDN1O60925 122 aa-4.48□□□□□ -3.13
LMBR1-222ENST00000638959 HIST1H1DP16402 221 aaKnown RBP-4.48□□□□□ -3.13
LMBR1-222ENST00000638959 SPTSSAQ969W0 71 aa-4.48□□□□□ -3.13
LMBR1-222ENST00000638959 CLIP1P30622 1438 aa-4.48□□□□□ -3.13
LMBR1-222ENST00000638959 MGST2Q99735 147 aa-4.49□□□□□ -3.13
LMBR1-222ENST00000638959 PRG4Q92954 1404 aaPredicted RBP-4.49□□□□□ -3.13
LMBR1-222ENST00000638959 A0A1W2PRE2 83 aa-4.5□□□□□ -3.13
LMBR1-222ENST00000638959 NDUFB6O95139 128 aa-4.5□□□□□ -3.13
LMBR1-222ENST00000638959 CDKN2CP42773 168 aa-4.5□□□□□ -3.13
LMBR1-222ENST00000638959 MAGOHBQ96A72 148 aaKnown RBP-4.5□□□□□ -3.13
LMBR1-222ENST00000638959 COPZ2Q9P299 210 aa-4.5□□□□□ -3.13
LMBR1-222ENST00000638959 A0A1B0GU69 56 aa-4.51□□□□□ -3.13
LMBR1-222ENST00000638959 LOC285095A0A1B0GVY8 99 aa-4.51□□□□□ -3.13
LMBR1-222ENST00000638959 PTMSP20962 102 aa-4.51□□□□□ -3.13
LMBR1-222ENST00000638959 PRLHP81277 87 aa-4.51□□□□□ -3.13
LMBR1-222ENST00000638959 MRPL54Q6P161 138 aaKnown RBP-4.51□□□□□ -3.13
LMBR1-222ENST00000638959 SPTAN1Q13813 2472 aaKnown RBP-4.51□□□□□ -3.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms