RNA–Protein interactions for RNA: ENST00000638488.1

GFAP-228, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 2,641 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-228ENST00000638488 RBMY1CP0DJD4 496 aa8.77□□□□□ -1.01
GFAP-228ENST00000638488 RBMY1FQ15415 496 aaKnown RBP8.77□□□□□ -1.01
GFAP-228ENST00000638488 S100A7L2Q5SY68 101 aa8.77□□□□□ -1.01
GFAP-228ENST00000638488 UBR5O95071 2799 aaPredicted RBP8.77□□□□□ -1.01
GFAP-228ENST00000638488 A0A096LNT2 108 aa8.76□□□□□ -1.01
GFAP-228ENST00000638488 H3BUA1 57 aa8.76□□□□□ -1.01
GFAP-228ENST00000638488 GHRHP01286 108 aa8.76□□□□□ -1.01
GFAP-228ENST00000638488 SOSTDC1Q6X4U4 206 aa8.76□□□□□ -1.01
GFAP-228ENST00000638488 Q9HAA7 133 aa8.76□□□□□ -1.01
GFAP-228ENST00000638488 C14orf132Q9NPU4 83 aa8.76□□□□□ -1.01
GFAP-228ENST00000638488 RPL35AP18077 110 aaKnown RBP8.75□□□□□ -1.01
GFAP-228ENST00000638488 NAV2Q8IVL1 2488 aa8.75□□□□□ -1.01
GFAP-228ENST00000638488 IGLV5-39A0A0G2JS06 123 aa8.75□□□□□ -1.01
GFAP-228ENST00000638488 IGHV4-31P0DP07 118 aa8.75□□□□□ -1.01
GFAP-228ENST00000638488 TRAV13-2A0A0B4J235 113 aa8.74□□□□□ -1.01
GFAP-228ENST00000638488 Q9H8V8 135 aa8.74□□□□□ -1.01
GFAP-228ENST00000638488 SMIM26A0A096LP01 95 aa8.74□□□□□ -1.01
GFAP-228ENST00000638488 BCE1O60756 84 aa8.74□□□□□ -1.01
GFAP-228ENST00000638488 CFHR3Q02985 330 aa8.74□□□□□ -1.01
GFAP-228ENST00000638488 Q96MF0 132 aa8.74□□□□□ -1.01
GFAP-228ENST00000638488 XCL1P47992 114 aa8.73□□□□□ -1.01
GFAP-228ENST00000638488 XCL2Q9UBD3 114 aa8.73□□□□□ -1.01
GFAP-228ENST00000638488 CDKN2A-AS1Q9UH64 79 aa8.73□□□□□ -1.01
GFAP-228ENST00000638488 DEFB113Q30KQ7 82 aa8.73□□□□□ -1.01
GFAP-228ENST00000638488 RNASE13Q5GAN3 156 aaKnown RBP8.73□□□□□ -1.01
GFAP-228ENST00000638488 C16orf95Q9H693 158 aa8.73□□□□□ -1.01
GFAP-228ENST00000638488 TRBV10-3A0A0K0K1G6 114 aa8.72□□□□□ -1.01
GFAP-228ENST00000638488 C20orf197Q8N268 126 aa8.72□□□□□ -1.01
GFAP-228ENST00000638488 H0YGX0 51 aa8.71□□□□□ -1.01
GFAP-228ENST00000638488 H7BZZ5 65 aa8.71□□□□□ -1.01
GFAP-228ENST00000638488 C9orf129Q5T035 196 aaKnown RBP8.71□□□□□ -1.01
GFAP-228ENST00000638488 TEX15Q9BXT5 2789 aa8.71□□□□□ -1.01
GFAP-228ENST00000638488 MXRA5Q9NR99 2828 aa8.71□□□□□ -1.01
GFAP-228ENST00000638488 KNCNA6PVL3 124 aa8.71□□□□□ -1.02
GFAP-228ENST00000638488 IGKV3-20P01619 116 aa8.71□□□□□ -1.02
GFAP-228ENST00000638488 SEC61GP60059 68 aa8.71□□□□□ -1.02
GFAP-228ENST00000638488 CHCHD7Q9BUK0 85 aa8.71□□□□□ -1.02
GFAP-228ENST00000638488 PKIGQ9Y2B9 76 aa8.71□□□□□ -1.02
GFAP-228ENST00000638488 NBPF19A0A087WUL8 3843 aa8.71□□□□□ -1.02
GFAP-228ENST00000638488 CRPP02741 224 aa8.7□□□□□ -1.02
GFAP-228ENST00000638488 CR1P17927 2039 aa8.7□□□□□ -1.02
GFAP-228ENST00000638488 V9GYY9 64 aa8.7□□□□□ -1.02
GFAP-228ENST00000638488 ZNF469Q96JG9 3925 aaPredicted RBP8.7□□□□□ -1.02
GFAP-228ENST00000638488 CCKP06307 115 aa8.69□□□□□ -1.02
GFAP-228ENST00000638488 LYPD5Q6UWN5 251 aa8.69□□□□□ -1.02
GFAP-228ENST00000638488 Q6YL49 198 aa8.69□□□□□ -1.02
GFAP-228ENST00000638488 HOXD3P31249 432 aaPredicted RBP8.69□□□□□ -1.02
GFAP-228ENST00000638488 ZNF625Q96I27 306 aaPredicted RBP8.69□□□□□ -1.02
GFAP-228ENST00000638488 CREBBPQ92793 2442 aa8.69□□□□□ -1.02
GFAP-228ENST00000638488 TLN2Q9Y4G6 2542 aa8.69□□□□□ -1.02
GFAP-228ENST00000638488 HILS1P60008 231 aa8.68□□□□□ -1.02
GFAP-228ENST00000638488 DEFB136Q30KP8 78 aa8.68□□□□□ -1.02
GFAP-228ENST00000638488 IGHV1OR15-1A0A075B7D0 117 aa8.68□□□□□ -1.02
GFAP-228ENST00000638488 A0A087WYN8 130 aa8.68□□□□□ -1.02
GFAP-228ENST00000638488 KLKP1Q107X0 134 aa8.68□□□□□ -1.02
GFAP-228ENST00000638488 FP248Q71RG6 208 aaPredicted RBP8.68□□□□□ -1.02
GFAP-228ENST00000638488 ZNF702PQ9H963 129 aa8.68□□□□□ -1.02
GFAP-228ENST00000638488 TRAV7A0A075B6U4 112 aa8.67□□□□□ -1.02
GFAP-228ENST00000638488 TRAV23DV6A0A075B6W5 121 aa8.67□□□□□ -1.02
GFAP-228ENST00000638488 KHDC1LQ5JSQ8 128 aa8.67□□□□□ -1.02
GFAP-228ENST00000638488 C18orf65Q6ZTR6 163 aa8.67□□□□□ -1.02
GFAP-228ENST00000638488 FAM19A3Q7Z5A8 133 aa8.67□□□□□ -1.02
GFAP-228ENST00000638488 A0A0U1RRA0 63 aa8.67□□□□□ -1.02
GFAP-228ENST00000638488 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.67□□□□□ -1.02
GFAP-228ENST00000638488 APCP25054 2843 aa8.67□□□□□ -1.02
GFAP-228ENST00000638488 K7EMT4 169 aa8.66□□□□□ -1.02
GFAP-228ENST00000638488 C1orf195Q5TG92 126 aa8.66□□□□□ -1.02
GFAP-228ENST00000638488 SMIM1B2RUZ4 78 aa8.66□□□□□ -1.02
GFAP-228ENST00000638488 WFDC11Q8NEX6 87 aa8.66□□□□□ -1.02
GFAP-228ENST00000638488 LINC00467Q9BRT7 94 aa8.66□□□□□ -1.02
GFAP-228ENST00000638488 SONP18583 2426 aaKnown RBP8.65□□□□□ -1.02
GFAP-228ENST00000638488 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.65□□□□□ -1.02
GFAP-228ENST00000638488 IGKV2-29A2NJV5 120 aaPredicted RBP8.65□□□□□ -1.02
GFAP-228ENST00000638488 NCR3O14931 201 aa8.65□□□□□ -1.02
GFAP-228ENST00000638488 FSHBP01225 129 aa8.65□□□□□ -1.02
GFAP-228ENST00000638488 CCDC168Q8NDH2 2452 aa8.65□□□□□ -1.03
GFAP-228ENST00000638488 ATP5EP56381 51 aaPredicted RBP8.65□□□□□ -1.03
GFAP-228ENST00000638488 LINC00337Q8N6G1 96 aa8.65□□□□□ -1.03
GFAP-228ENST00000638488 SMIM11BQ8TCY0 68 aa8.65□□□□□ -1.03
GFAP-228ENST00000638488 SLURP1P55000 103 aa8.64□□□□□ -1.03
GFAP-228ENST00000638488 COX6A2Q02221 97 aa8.64□□□□□ -1.03
GFAP-228ENST00000638488 PIK3CD-AS1Q5SR53 167 aa8.64□□□□□ -1.03
GFAP-228ENST00000638488 SORL1Q92673 2214 aa8.64□□□□□ -1.03
GFAP-228ENST00000638488 LINC00242Q5T6M2 205 aa8.64□□□□□ -1.03
GFAP-228ENST00000638488 JMJD7-PLA2G4BH0Y9G9 81 aa8.63□□□□□ -1.03
GFAP-228ENST00000638488 KRTAP1-3Q8IUG1 177 aa8.63□□□□□ -1.03
GFAP-228ENST00000638488 TENM4Q6N022 2769 aa8.63□□□□□ -1.03
GFAP-228ENST00000638488 SNRPD3P62318 126 aaKnown RBP8.63□□□□□ -1.03
GFAP-228ENST00000638488 ENHOQ6UWT2 76 aa8.63□□□□□ -1.03
GFAP-228ENST00000638488 FAM19A1Q7Z5A9 133 aa8.63□□□□□ -1.03
GFAP-228ENST00000638488 C11orf44Q8N8P7 122 aa8.63□□□□□ -1.03
GFAP-228ENST00000638488 ORMDL1Q9P0S3 153 aa8.63□□□□□ -1.03
GFAP-228ENST00000638488 IGKV2-28A0A075B6P5 120 aa8.62□□□□□ -1.03
GFAP-228ENST00000638488 IGHV3OR16-12A0A075B7B8 117 aa8.62□□□□□ -1.03
GFAP-228ENST00000638488 LECT2O14960 151 aa8.62□□□□□ -1.03
GFAP-228ENST00000638488 NDUFC1O43677 76 aa8.62□□□□□ -1.03
GFAP-228ENST00000638488 IGKV2D-28P01615 120 aa8.62□□□□□ -1.03
GFAP-228ENST00000638488 MIR7-3HGQ8N6C7 128 aa8.62□□□□□ -1.03
GFAP-228ENST00000638488 UBE2E2Q96LR5 201 aa8.62□□□□□ -1.03
GFAP-228ENST00000638488 TMEM89A2RUT3 159 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms