RNA–Protein interactions for RNA: ENST00000638375.1

HLA-A-209, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 975 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-209ENST00000638375 Q8N814 137 aa12.75□□□□□ -0.37
HLA-A-209ENST00000638375 C15orf56Q8N910 161 aa12.75□□□□□ -0.37
HLA-A-209ENST00000638375 IFI27L1Q96BM0 104 aa12.75□□□□□ -0.37
HLA-A-209ENST00000638375 A0A0J9YXV3 536 aa12.74□□□□□ -0.37
HLA-A-209ENST00000638375 LEPROTL1O95214 131 aa12.74□□□□□ -0.37
HLA-A-209ENST00000638375 KRTAP10-2P60368 255 aa12.74□□□□□ -0.37
HLA-A-209ENST00000638375 C5orf38Q86SI9 138 aa12.74□□□□□ -0.37
HLA-A-209ENST00000638375 COX7A2LO14548 114 aa12.73□□□□□ -0.37
HLA-A-209ENST00000638375 FUSP35637 526 aaKnown RBP eCLIP12.73□□□□□ -0.37
HLA-A-209ENST00000638375 SPATA12Q7Z6I5 190 aa12.73□□□□□ -0.37
HLA-A-209ENST00000638375 FABP4P15090 132 aa12.72□□□□□ -0.37
HLA-A-209ENST00000638375 DNAH5Q8TE73 4624 aa12.72□□□□□ -0.37
HLA-A-209ENST00000638375 EPPK1P58107 5090 aaKnown RBP12.71□□□□□ -0.37
HLA-A-209ENST00000638375 PRSS1P07477 247 aa12.71□□□□□ -0.37
HLA-A-209ENST00000638375 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.7□□□□□ -0.38
HLA-A-209ENST00000638375 C14orf177Q52M58 125 aa12.7□□□□□ -0.38
HLA-A-209ENST00000638375 CFAP161Q6P656 301 aa12.7□□□□□ -0.38
HLA-A-209ENST00000638375 HSPB8Q9UJY1 196 aa12.7□□□□□ -0.38
HLA-A-209ENST00000638375 IGLV4-69A0A075B6H9 119 aa12.69□□□□□ -0.38
HLA-A-209ENST00000638375 IGHV1-58A0A0C4DH39 117 aa12.69□□□□□ -0.38
HLA-A-209ENST00000638375 TINCRA0A1B0GVN0 87 aa12.69□□□□□ -0.38
HLA-A-209ENST00000638375 MALP21145 153 aa12.69□□□□□ -0.38
HLA-A-209ENST00000638375 HERVK_113P63121 156 aa12.69□□□□□ -0.38
HLA-A-209ENST00000638375 SEC11AP67812 179 aa12.69□□□□□ -0.38
HLA-A-209ENST00000638375 HIGD2BQ4VC39 106 aa12.69□□□□□ -0.38
HLA-A-209ENST00000638375 DYNC1H1Q14204 4646 aaKnown RBP12.69□□□□□ -0.38
HLA-A-209ENST00000638375 A0A087WZ39 114 aa12.68□□□□□ -0.38
HLA-A-209ENST00000638375 TRAV12-1A0A0B4J245 112 aa12.68□□□□□ -0.38
HLA-A-209ENST00000638375 IGLC3P0DOY3 106 aa12.68□□□□□ -0.38
HLA-A-209ENST00000638375 GEMIN7Q9H840 131 aaKnown RBP12.68□□□□□ -0.38
HLA-A-209ENST00000638375 CDKN2A-AS1Q9UH64 79 aa12.68□□□□□ -0.38
HLA-A-209ENST00000638375 GVQW2A0A096LPI5 108 aaPredicted RBP12.67□□□□□ -0.38
HLA-A-209ENST00000638375 hDV102S1A0JD36 115 aa12.67□□□□□ -0.38
HLA-A-209ENST00000638375 NTN5Q8WTR8 489 aaPredicted RBP12.67□□□□□ -0.38
HLA-A-209ENST00000638375 IGLV5-45A0A087WSX0 123 aa12.66□□□□□ -0.38
HLA-A-209ENST00000638375 PACRGQ96M98 296 aaPredicted RBP12.66□□□□□ -0.38
HLA-A-209ENST00000638375 CHAC1Q9BUX1 264 aa12.66□□□□□ -0.38
HLA-A-209ENST00000638375 CHTOPQ9Y3Y2 248 aaKnown RBP12.66□□□□□ -0.38
HLA-A-209ENST00000638375 H0Y8G0 127 aa12.65□□□□□ -0.38
HLA-A-209ENST00000638375 LINC00469Q8N7U9 141 aa12.65□□□□□ -0.38
HLA-A-209ENST00000638375 PGPEP1Q9NXJ5 209 aa12.65□□□□□ -0.38
HLA-A-209ENST00000638375 PKHD1P08F94 4074 aa12.65□□□□□ -0.38
HLA-A-209ENST00000638375 IGHV3-64A0A075B6Q5 118 aa12.64□□□□□ -0.39
HLA-A-209ENST00000638375 IGLV5-52A0A0A0MRZ9 124 aa12.64□□□□□ -0.39
HLA-A-209ENST00000638375 C11orf86A6NJI1 115 aa12.64□□□□□ -0.39
HLA-A-209ENST00000638375 APOMO95445 188 aa12.64□□□□□ -0.39
HLA-A-209ENST00000638375 SLPIP03973 132 aa12.64□□□□□ -0.39
HLA-A-209ENST00000638375 ODF1Q14990 250 aa12.64□□□□□ -0.39
HLA-A-209ENST00000638375 CDPF1Q6NVV7 123 aa12.64□□□□□ -0.39
HLA-A-209ENST00000638375 LINC01561Q8N1V8 128 aa12.64□□□□□ -0.39
HLA-A-209ENST00000638375 LINC00526Q96FQ7 95 aa12.64□□□□□ -0.39
HLA-A-209ENST00000638375 MRPL35Q9NZE8 188 aaKnown RBP12.64□□□□□ -0.39
HLA-A-209ENST00000638375 F8VRH5 84 aa12.63□□□□□ -0.39
HLA-A-209ENST00000638375 HIST3H2BBQ8N257 126 aa12.63□□□□□ -0.39
HLA-A-209ENST00000638375 ORAOV1Q8WV07 137 aa12.63□□□□□ -0.39
HLA-A-209ENST00000638375 S100A6P06703 90 aa12.62□□□□□ -0.39
HLA-A-209ENST00000638375 ZNF22P17026 224 aaPredicted RBP12.62□□□□□ -0.39
HLA-A-209ENST00000638375 OR10D4PQ8NGN7 298 aa12.62□□□□□ -0.39
HLA-A-209ENST00000638375 MAP1LC3CQ9BXW4 147 aa12.62□□□□□ -0.39
HLA-A-209ENST00000638375 CNBPP62633 177 aaKnown RBP12.61□□□□□ -0.39
HLA-A-209ENST00000638375 SPAG11BQ08648 103 aa12.61□□□□□ -0.39
HLA-A-209ENST00000638375 LRP1BQ9NZR2 4599 aa12.6□□□□□ -0.39
HLA-A-209ENST00000638375 C16orf90A8MZG2 172 aa12.6□□□□□ -0.39
HLA-A-209ENST00000638375 SMIM1B2RUZ4 78 aa12.6□□□□□ -0.39
HLA-A-209ENST00000638375 ZNF561-AS1K7EIQ3 104 aa12.6□□□□□ -0.39
HLA-A-209ENST00000638375 SYS1-DBNDD2H3BUS1 97 aa12.59□□□□□ -0.39
HLA-A-209ENST00000638375 SPINK8P0C7L1 97 aa12.59□□□□□ -0.39
HLA-A-209ENST00000638375 SNRPEP62304 92 aaKnown RBP12.59□□□□□ -0.39
HLA-A-209ENST00000638375 KIAA0087Q14695 138 aa12.59□□□□□ -0.39
HLA-A-209ENST00000638375 C3orf79P0CE67 100 aa12.58□□□□□ -0.4
HLA-A-209ENST00000638375 LINC01620Q4KN68 170 aa12.58□□□□□ -0.4
HLA-A-209ENST00000638375 PMCHL2Q9BQD1 86 aa12.58□□□□□ -0.4
HLA-A-209ENST00000638375 C5orf52A6NGY3 159 aa12.57□□□□□ -0.4
HLA-A-209ENST00000638375 H3BRM9 83 aa12.57□□□□□ -0.4
HLA-A-209ENST00000638375 TMEM170BQ5T4T1 132 aa12.57□□□□□ -0.4
HLA-A-209ENST00000638375 C2orf48Q96LS8 159 aa12.57□□□□□ -0.4
HLA-A-209ENST00000638375 HIST1H2BLQ99880 126 aa12.57□□□□□ -0.4
HLA-A-209ENST00000638375 BIRC6Q9NR09 4857 aa12.56□□□□□ -0.4
HLA-A-209ENST00000638375 GCSHP23434 173 aa12.56□□□□□ -0.4
HLA-A-209ENST00000638375 S100A2P29034 98 aa12.56□□□□□ -0.4
HLA-A-209ENST00000638375 KRTAP10-1P60331 282 aa12.56□□□□□ -0.4
HLA-A-209ENST00000638375 C9orf163Q8N9P6 203 aa12.56□□□□□ -0.4
HLA-A-209ENST00000638375 PET117Q6UWS5 81 aa12.55□□□□□ -0.4
HLA-A-209ENST00000638375 TOMM7Q9P0U1 55 aa12.55□□□□□ -0.4
HLA-A-209ENST00000638375 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.54□□□□□ -0.4
HLA-A-209ENST00000638375 KRTDAPP60985 99 aa12.54□□□□□ -0.4
HLA-A-209ENST00000638375 SYCNQ0VAF6 134 aa12.54□□□□□ -0.4
HLA-A-209ENST00000638375 LINC01545Q5VT33 79 aa12.54□□□□□ -0.4
HLA-A-209ENST00000638375 Q6ZRU5 148 aa12.54□□□□□ -0.4
HLA-A-209ENST00000638375 Q8IZM0 81 aa12.54□□□□□ -0.4
HLA-A-209ENST00000638375 CARD19Q96LW7 228 aa12.54□□□□□ -0.4
HLA-A-209ENST00000638375 CAMK2N2Q96S95 79 aa12.54□□□□□ -0.4
HLA-A-209ENST00000638375 IGLV5-39A0A0G2JS06 123 aa12.53□□□□□ -0.4
HLA-A-209ENST00000638375 DPM2O94777 84 aa12.53□□□□□ -0.4
HLA-A-209ENST00000638375 DNAH8Q96JB1 4490 aa12.53□□□□□ -0.4
HLA-A-209ENST00000638375 TMEM223A0PJW6 202 aa12.52□□□□□ -0.41
HLA-A-209ENST00000638375 PLNP26678 52 aa12.52□□□□□ -0.41
HLA-A-209ENST00000638375 C10orf25Q5T742 122 aa12.52□□□□□ -0.41
HLA-A-209ENST00000638375 C2orf82Q6UX34 121 aa12.52□□□□□ -0.41
HLA-A-209ENST00000638375 F8WDY8 70 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 282.9 ms