RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 SS18Q15532 418 aa8.61□□□□□ -1.03
CAPN3-221ENST00000638141 SMIM11BQ8TCY0 68 aa8.61□□□□□ -1.03
CAPN3-221ENST00000638141 LINC00467Q9BRT7 94 aa8.61□□□□□ -1.03
CAPN3-221ENST00000638141 SAA4P35542 130 aa8.6□□□□□ -1.03
CAPN3-221ENST00000638141 LINC00242Q5T6M2 205 aa8.6□□□□□ -1.03
CAPN3-221ENST00000638141 IGKV2-28A0A075B6P5 120 aa8.59□□□□□ -1.03
CAPN3-221ENST00000638141 NCR3O14931 201 aa8.59□□□□□ -1.03
CAPN3-221ENST00000638141 IGKV2D-28P01615 120 aa8.59□□□□□ -1.03
CAPN3-221ENST00000638141 COX6A2Q02221 97 aa8.59□□□□□ -1.03
CAPN3-221ENST00000638141 CFHR3Q02985 330 aa8.59□□□□□ -1.03
CAPN3-221ENST00000638141 ORMDL1Q9P0S3 153 aa8.59□□□□□ -1.03
CAPN3-221ENST00000638141 IGHV3OR16-12A0A075B7B8 117 aa8.59□□□□□ -1.03
CAPN3-221ENST00000638141 IGKV2-29A2NJV5 120 aaPredicted RBP8.59□□□□□ -1.03
CAPN3-221ENST00000638141 FBXL19-AS1Q494R0 122 aa8.59□□□□□ -1.03
CAPN3-221ENST00000638141 CRYBG3Q68DQ2 2970 aa8.59□□□□□ -1.03
CAPN3-221ENST00000638141 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.58□□□□□ -1.04
CAPN3-221ENST00000638141 SNRPD3P62318 126 aaKnown RBP8.58□□□□□ -1.04
CAPN3-221ENST00000638141 ADORA2A-AS1P86434 159 aa8.58□□□□□ -1.04
CAPN3-221ENST00000638141 FAM19A1Q7Z5A9 133 aa8.58□□□□□ -1.04
CAPN3-221ENST00000638141 MIR7-3HGQ8N6C7 128 aa8.58□□□□□ -1.04
CAPN3-221ENST00000638141 DOPEY1Q5JWR5 2465 aa8.58□□□□□ -1.04
CAPN3-221ENST00000638141 A0A0U1RRA0 63 aa8.58□□□□□ -1.04
CAPN3-221ENST00000638141 J3QKU1 62 aa8.58□□□□□ -1.04
CAPN3-221ENST00000638141 ENHOQ6UWT2 76 aa8.58□□□□□ -1.04
CAPN3-221ENST00000638141 WFDC11Q8NEX6 87 aa8.58□□□□□ -1.04
CAPN3-221ENST00000638141 LECT2O14960 151 aa8.57□□□□□ -1.04
CAPN3-221ENST00000638141 CDSNQ15517 529 aa8.57□□□□□ -1.04
CAPN3-221ENST00000638141 C11orf71Q6IPW1 123 aa8.57□□□□□ -1.04
CAPN3-221ENST00000638141 UBL5Q9BZL1 73 aa8.57□□□□□ -1.04
CAPN3-221ENST00000638141 ZFP36P26651 326 aaKnown RBP8.57□□□□□ -1.04
CAPN3-221ENST00000638141 SND1-IT1Q9HBX3 110 aa8.57□□□□□ -1.04
CAPN3-221ENST00000638141 MAST4O15021 2626 aa8.56□□□□□ -1.04
CAPN3-221ENST00000638141 TRBV7-6A0A0J9YX20 115 aa8.56□□□□□ -1.04
CAPN3-221ENST00000638141 BLCAPP62952 87 aa8.56□□□□□ -1.04
CAPN3-221ENST00000638141 DCHS2Q6V1P9 2916 aa8.56□□□□□ -1.04
CAPN3-221ENST00000638141 ASH1LQ9NR48 2969 aaKnown RBP8.56□□□□□ -1.04
CAPN3-221ENST00000638141 USP9YO00507 2555 aaPredicted RBP8.56□□□□□ -1.04
CAPN3-221ENST00000638141 CENPEQ02224 2701 aa8.56□□□□□ -1.04
CAPN3-221ENST00000638141 LINC00482Q8N8I6 264 aa8.56□□□□□ -1.04
CAPN3-221ENST00000638141 DGAT2L7PQ6IED9 249 aa8.55□□□□□ -1.04
CAPN3-221ENST00000638141 K7EQG2 157 aa8.55□□□□□ -1.04
CAPN3-221ENST00000638141 LY6G6DO95868 133 aa8.55□□□□□ -1.04
CAPN3-221ENST00000638141 IGHV3-53P01767 116 aa8.55□□□□□ -1.04
CAPN3-221ENST00000638141 BRK1Q8WUW1 75 aa8.55□□□□□ -1.04
CAPN3-221ENST00000638141 DOPEY2Q9Y3R5 2298 aa8.54□□□□□ -1.04
CAPN3-221ENST00000638141 IGKV3-7A0A075B6H7 116 aa8.54□□□□□ -1.04
CAPN3-221ENST00000638141 F8WEM9 126 aa8.54□□□□□ -1.04
CAPN3-221ENST00000638141 EDN2P20800 178 aa8.54□□□□□ -1.04
CAPN3-221ENST00000638141 NBPF19A0A087WUL8 3843 aa8.53□□□□□ -1.04
CAPN3-221ENST00000638141 NAV2Q8IVL1 2488 aa8.53□□□□□ -1.04
CAPN3-221ENST00000638141 WFDC9Q8NEX5 89 aa8.53□□□□□ -1.04
CAPN3-221ENST00000638141 CELSR2Q9HCU4 2923 aa8.53□□□□□ -1.04
CAPN3-221ENST00000638141 IGLV1-40P01703 118 aa8.53□□□□□ -1.04
CAPN3-221ENST00000638141 PROK1P58294 105 aa8.53□□□□□ -1.04
CAPN3-221ENST00000638141 RPL36AP83881 106 aaKnown RBP8.53□□□□□ -1.04
CAPN3-221ENST00000638141 SPINK13Q1W4C9 94 aa8.53□□□□□ -1.04
CAPN3-221ENST00000638141 RPL36ALQ969Q0 106 aaKnown RBP8.53□□□□□ -1.04
CAPN3-221ENST00000638141 MED13LQ71F56 2210 aa8.52□□□□□ -1.04
CAPN3-221ENST00000638141 TACC2O95359 2948 aa8.52□□□□□ -1.05
CAPN3-221ENST00000638141 A8MTW9 85 aa8.52□□□□□ -1.05
CAPN3-221ENST00000638141 TMEM256-PLSCR3K7ERE1 68 aa8.52□□□□□ -1.05
CAPN3-221ENST00000638141 LY6HO94772 140 aa8.52□□□□□ -1.05
CAPN3-221ENST00000638141 RBM3P98179 157 aaKnown RBP8.52□□□□□ -1.05
CAPN3-221ENST00000638141 LINC01560Q8TB33 94 aa8.52□□□□□ -1.05
CAPN3-221ENST00000638141 LRBAP50851 2863 aa8.52□□□□□ -1.05
CAPN3-221ENST00000638141 IBA57-AS1B1ANH7 110 aa8.51□□□□□ -1.05
CAPN3-221ENST00000638141 ANKHD1Q8IWZ3 2542 aaKnown RBP8.51□□□□□ -1.05
CAPN3-221ENST00000638141 GRNP28799 593 aaKnown RBP8.51□□□□□ -1.05
CAPN3-221ENST00000638141 PTPN13Q12923 2485 aa8.51□□□□□ -1.05
CAPN3-221ENST00000638141 IGHV3-11P01762 117 aa8.5□□□□□ -1.05
CAPN3-221ENST00000638141 RMI2Q96E14 147 aa8.5□□□□□ -1.05
CAPN3-221ENST00000638141 LINC00474Q9P2X8 69 aa8.5□□□□□ -1.05
CAPN3-221ENST00000638141 ERC2-IT1O76042 136 aa8.5□□□□□ -1.05
CAPN3-221ENST00000638141 CCL18P55774 89 aa8.5□□□□□ -1.05
CAPN3-221ENST00000638141 C1orf158Q8N1D5 194 aa8.5□□□□□ -1.05
CAPN3-221ENST00000638141 LAMTOR3Q9UHA4 124 aa8.5□□□□□ -1.05
CAPN3-221ENST00000638141 IGHV3-73A0A0B4J1V6 119 aa8.49□□□□□ -1.05
CAPN3-221ENST00000638141 Q6ZSN1 163 aa8.49□□□□□ -1.05
CAPN3-221ENST00000638141 C11orf72Q8NBR9 251 aa8.49□□□□□ -1.05
CAPN3-221ENST00000638141 HECTD1Q9ULT8 2610 aa8.49□□□□□ -1.05
CAPN3-221ENST00000638141 IGHV3-38A0A0C4DH36 116 aa8.49□□□□□ -1.05
CAPN3-221ENST00000638141 C19orf84I3L1E1 186 aa8.49□□□□□ -1.05
CAPN3-221ENST00000638141 CXCL6P80162 114 aa8.49□□□□□ -1.05
CAPN3-221ENST00000638141 HRNRQ86YZ3 2850 aaPredicted RBP8.49□□□□□ -1.05
CAPN3-221ENST00000638141 TRBV7-4A0A0J9YYF1 115 aa8.48□□□□□ -1.05
CAPN3-221ENST00000638141 Q9UF83 564 aa8.48□□□□□ -1.05
CAPN3-221ENST00000638141 LOC110117498A0A087WWA1 95 aa8.48□□□□□ -1.05
CAPN3-221ENST00000638141 TRBV6-4A0A1B0GX49 114 aa8.48□□□□□ -1.05
CAPN3-221ENST00000638141 TMEM89A2RUT3 159 aa8.48□□□□□ -1.05
CAPN3-221ENST00000638141 SLPIP03973 132 aa8.48□□□□□ -1.05
CAPN3-221ENST00000638141 KHDC1LQ5JSQ8 128 aa8.48□□□□□ -1.05
CAPN3-221ENST00000638141 COX7B2Q8TF08 81 aa8.48□□□□□ -1.05
CAPN3-221ENST00000638141 A0A0U1RQV1 116 aa8.47□□□□□ -1.05
CAPN3-221ENST00000638141 SNURFQ9Y675 71 aa8.47□□□□□ -1.05
CAPN3-221ENST00000638141 IGKV3-20P01619 116 aa8.47□□□□□ -1.05
CAPN3-221ENST00000638141 A6NDX4 124 aa8.46□□□□□ -1.06
CAPN3-221ENST00000638141 LINC01547P58512 204 aaPredicted RBP8.46□□□□□ -1.06
CAPN3-221ENST00000638141 PRR15Q8IV56 129 aa8.46□□□□□ -1.06
CAPN3-221ENST00000638141 Q8N814 137 aa8.46□□□□□ -1.06
CAPN3-221ENST00000638141 Q96MF0 132 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms