RNA–Protein interactions for RNA: ENST00000638041.1

MECP2-225, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 100 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-225ENST00000638041 HIGD2BQ4VC39 106 aa4.63□□□□□ -1.67
MECP2-225ENST00000638041 SCXQ7RTU7 201 aa4.63□□□□□ -1.67
MECP2-225ENST00000638041 H3BRM9 83 aa4.62□□□□□ -1.67
MECP2-225ENST00000638041 NPYP01303 97 aa4.62□□□□□ -1.67
MECP2-225ENST00000638041 FUSP35637 526 aaKnown RBP eCLIP4.62□□□□□ -1.67
MECP2-225ENST00000638041 CXCL5P42830 114 aa4.62□□□□□ -1.67
MECP2-225ENST00000638041 SPAG11BQ08648 103 aa4.62□□□□□ -1.67
MECP2-225ENST00000638041 FABP9Q0Z7S8 132 aa4.62□□□□□ -1.67
MECP2-225ENST00000638041 C6orf226Q5I0X4 101 aa4.62□□□□□ -1.67
MECP2-225ENST00000638041 SFTA2Q6UW10 78 aa4.62□□□□□ -1.67
MECP2-225ENST00000638041 C2orf66Q6UXQ4 117 aa4.62□□□□□ -1.67
MECP2-225ENST00000638041 ORAOV1Q8WV07 137 aa4.62□□□□□ -1.67
MECP2-225ENST00000638041 PKHD1P08F94 4074 aa4.62□□□□□ -1.67
MECP2-225ENST00000638041 IGKV2-24A0A0C4DH68 120 aa4.61□□□□□ -1.67
MECP2-225ENST00000638041 COX6A2Q02221 97 aa4.61□□□□□ -1.67
MECP2-225ENST00000638041 WFDC2Q14508 124 aa4.61□□□□□ -1.67
MECP2-225ENST00000638041 SDIM1Q6ZPB5 146 aa4.61□□□□□ -1.67
MECP2-225ENST00000638041 STPG4Q8N801 248 aa4.61□□□□□ -1.67
MECP2-225ENST00000638041 CIRBP-AS1Q8TBR5 109 aa4.61□□□□□ -1.67
MECP2-225ENST00000638041 SCGB3A1Q96QR1 104 aa4.61□□□□□ -1.67
MECP2-225ENST00000638041 TIMM17AQ99595 171 aa4.61□□□□□ -1.67
MECP2-225ENST00000638041 TRBV30A0A0K0K1B3 111 aa4.6□□□□□ -1.67
MECP2-225ENST00000638041 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.6□□□□□ -1.67
MECP2-225ENST00000638041 OXTP01178 125 aa4.6□□□□□ -1.67
MECP2-225ENST00000638041 APOC3P02656 99 aa4.6□□□□□ -1.67
MECP2-225ENST00000638041 RPL18AQ02543 176 aaKnown RBP4.6□□□□□ -1.67
MECP2-225ENST00000638041 KRTAP26-1Q6PEX3 210 aa4.6□□□□□ -1.67
MECP2-225ENST00000638041 Q6ZUT4 128 aa4.6□□□□□ -1.67
MECP2-225ENST00000638041 ERASQ7Z444 233 aa4.6□□□□□ -1.67
MECP2-225ENST00000638041 C5orf38Q86SI9 138 aa4.6□□□□□ -1.67
MECP2-225ENST00000638041 C15orf56Q8N910 161 aa4.6□□□□□ -1.67
MECP2-225ENST00000638041 MRPL18Q9H0U6 180 aaKnown RBP4.6□□□□□ -1.67
MECP2-225ENST00000638041 MRPL35Q9NZE8 188 aaKnown RBP4.6□□□□□ -1.67
MECP2-225ENST00000638041 TRAPPC1Q9Y5R8 145 aa4.6□□□□□ -1.67
MECP2-225ENST00000638041 A0A087WZ39 114 aa4.59□□□□□ -1.67
MECP2-225ENST00000638041 ATP5LO75964 103 aa4.59□□□□□ -1.67
MECP2-225ENST00000638041 RPL39P62891 51 aaKnown RBP4.59□□□□□ -1.67
MECP2-225ENST00000638041 GAGE2BQ13066 116 aa4.59□□□□□ -1.67
MECP2-225ENST00000638041 REG3GQ6UW15 175 aa4.59□□□□□ -1.67
MECP2-225ENST00000638041 Q6ZRP5 223 aa4.59□□□□□ -1.67
MECP2-225ENST00000638041 FAM30AQ9NZY2 134 aa4.59□□□□□ -1.67
MECP2-225ENST00000638041 CARHSP1Q9Y2V2 147 aaKnown RBP4.59□□□□□ -1.67
MECP2-225ENST00000638041 IGLV4-3A0A075B6K6 122 aa4.58□□□□□ -1.68
MECP2-225ENST00000638041 A0A087WYN8 130 aa4.58□□□□□ -1.68
MECP2-225ENST00000638041 GAS8-AS1O95177 125 aa4.58□□□□□ -1.68
MECP2-225ENST00000638041 LINC01620Q4KN68 170 aa4.58□□□□□ -1.68
MECP2-225ENST00000638041 RNASE13Q5GAN3 156 aaKnown RBP4.58□□□□□ -1.68
MECP2-225ENST00000638041 Q6ZRU5 148 aa4.58□□□□□ -1.68
MECP2-225ENST00000638041 SPACA4Q8TDM5 124 aa4.58□□□□□ -1.68
MECP2-225ENST00000638041 TOMM6Q96B49 74 aa4.58□□□□□ -1.68
MECP2-225ENST00000638041 PLAC8Q9NZF1 115 aa4.58□□□□□ -1.68
MECP2-225ENST00000638041 TOMM7Q9P0U1 55 aa4.58□□□□□ -1.68
MECP2-225ENST00000638041 DNAH11Q96DT5 4516 aa4.58□□□□□ -1.68
MECP2-225ENST00000638041 IGHV3OR16-9A0A0B4J2B5 98 aa4.57□□□□□ -1.68
MECP2-225ENST00000638041 LINC00587B1AMM8 73 aa4.57□□□□□ -1.68
MECP2-225ENST00000638041 GHRHP01286 108 aa4.57□□□□□ -1.68
MECP2-225ENST00000638041 PTTG1IPP53801 180 aa4.57□□□□□ -1.68
MECP2-225ENST00000638041 NDUFA6P56556 154 aa4.57□□□□□ -1.68
MECP2-225ENST00000638041 CIRBPQ14011 172 aaKnown RBP4.57□□□□□ -1.68
MECP2-225ENST00000638041 PMVKQ15126 192 aa4.57□□□□□ -1.68
MECP2-225ENST00000638041 LBHQ53QV2 105 aaPredicted RBP4.57□□□□□ -1.68
MECP2-225ENST00000638041 SERTAD4-AS1Q5TG53 156 aa4.57□□□□□ -1.68
MECP2-225ENST00000638041 Q8IZM0 81 aa4.57□□□□□ -1.68
MECP2-225ENST00000638041 LINC00469Q8N7U9 141 aa4.57□□□□□ -1.68
MECP2-225ENST00000638041 TINCRA0A1B0GVN0 87 aa4.56□□□□□ -1.68
MECP2-225ENST00000638041 ATP6V1G1O75348 118 aa4.56□□□□□ -1.68
MECP2-225ENST00000638041 HBDP02042 147 aa4.56□□□□□ -1.68
MECP2-225ENST00000638041 LINC00614P0C842 121 aa4.56□□□□□ -1.68
MECP2-225ENST00000638041 UBE2D1P51668 147 aa4.56□□□□□ -1.68
MECP2-225ENST00000638041 UBE2BP63146 152 aa4.56□□□□□ -1.68
MECP2-225ENST00000638041 S100A12P80511 92 aa4.56□□□□□ -1.68
MECP2-225ENST00000638041 C10orf91Q5T1B1 145 aa4.56□□□□□ -1.68
MECP2-225ENST00000638041 NDUFC2-KCTD14E9PQ53 114 aa4.55□□□□□ -1.68
MECP2-225ENST00000638041 F8VRH5 84 aa4.55□□□□□ -1.68
MECP2-225ENST00000638041 TLX1NBP0CAT3 122 aa4.55□□□□□ -1.68
MECP2-225ENST00000638041 HAMPP81172 84 aa4.55□□□□□ -1.68
MECP2-225ENST00000638041 KIAA1644Q3SXP7 199 aa4.55□□□□□ -1.68
MECP2-225ENST00000638041 PDZD11Q5EBL8 140 aa4.55□□□□□ -1.68
MECP2-225ENST00000638041 FAM19A3Q7Z5A8 133 aa4.55□□□□□ -1.68
MECP2-225ENST00000638041 CHCHD1Q96BP2 118 aaKnown RBP4.55□□□□□ -1.68
MECP2-225ENST00000638041 AMELXQ99217 191 aa4.55□□□□□ -1.68
MECP2-225ENST00000638041 A0A096LNI7 61 aa4.54□□□□□ -1.68
MECP2-225ENST00000638041 IGIPA6NJ69 53 aa4.54□□□□□ -1.68
MECP2-225ENST00000638041 KRTAP29-1A8MX34 341 aaPredicted RBP4.54□□□□□ -1.68
MECP2-225ENST00000638041 IFITM2Q01629 132 aa4.54□□□□□ -1.68
MECP2-225ENST00000638041 LINC00242Q5T6M2 205 aa4.54□□□□□ -1.68
MECP2-225ENST00000638041 SPINK6Q6UWN8 80 aa4.54□□□□□ -1.68
MECP2-225ENST00000638041 BAGE3Q86Y29 109 aa4.54□□□□□ -1.68
MECP2-225ENST00000638041 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.54□□□□□ -1.68
MECP2-225ENST00000638041 DYNC1H1Q14204 4646 aaKnown RBP4.53□□□□□ -1.68
MECP2-225ENST00000638041 TMEM238LA0A1B0GVL6 79 aa4.53□□□□□ -1.68
MECP2-225ENST00000638041 HSBP1O75506 76 aa4.53□□□□□ -1.68
MECP2-225ENST00000638041 ADCYAP1P18509 176 aa4.53□□□□□ -1.68
MECP2-225ENST00000638041 GAGE2EQ4V326 116 aa4.53□□□□□ -1.68
MECP2-225ENST00000638041 OPRPNQ99935 248 aaPredicted RBP4.53□□□□□ -1.68
MECP2-225ENST00000638041 GAGE2DQ9UEU5 116 aa4.53□□□□□ -1.68
MECP2-225ENST00000638041 DNAH5Q8TE73 4624 aa4.52□□□□□ -1.69
MECP2-225ENST00000638041 LRP1BQ9NZR2 4599 aa4.52□□□□□ -1.69
MECP2-225ENST00000638041 LINC01546A6NGU7 62 aa4.52□□□□□ -1.69
MECP2-225ENST00000638041 CHTF8P0CG12 524 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 219.3 ms