RNA–Protein interactions for RNA: ENST00000637671.1

SYNGAP1-223, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 100 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-223ENST00000637671 CDIP1Q9H305 208 aa6.93□□□□□ -1.3
SYNGAP1-223ENST00000637671 IGHV3OR16-9A0A0B4J2B5 98 aa6.92□□□□□ -1.3
SYNGAP1-223ENST00000637671 NDUFC2-KCTD14E9PQ53 114 aa6.92□□□□□ -1.3
SYNGAP1-223ENST00000637671 PPP1R2P9O14990 202 aa6.92□□□□□ -1.3
SYNGAP1-223ENST00000637671 NUPR1O60356 82 aa6.92□□□□□ -1.3
SYNGAP1-223ENST00000637671 CRYGAP11844 174 aa6.92□□□□□ -1.3
SYNGAP1-223ENST00000637671 FAM231DQ6ZW35 169 aa6.92□□□□□ -1.3
SYNGAP1-223ENST00000637671 AMN1Q8IY45 258 aa6.92□□□□□ -1.3
SYNGAP1-223ENST00000637671 TGIF2-C20orf24A0A0A6YYL0 155 aa6.91□□□□□ -1.3
SYNGAP1-223ENST00000637671 TRBV30A0A0K0K1B3 111 aa6.91□□□□□ -1.3
SYNGAP1-223ENST00000637671 HIGD1CA8MV81 97 aa6.91□□□□□ -1.3
SYNGAP1-223ENST00000637671 SMKR1H3BMG3 65 aa6.91□□□□□ -1.3
SYNGAP1-223ENST00000637671 HBBP68871 147 aa6.91□□□□□ -1.3
SYNGAP1-223ENST00000637671 PACRGQ96M98 296 aaPredicted RBP6.91□□□□□ -1.3
SYNGAP1-223ENST00000637671 MUC17Q685J3 4493 aa6.91□□□□□ -1.3
SYNGAP1-223ENST00000637671 IFITM10A6NMD0 228 aa6.9□□□□□ -1.3
SYNGAP1-223ENST00000637671 TCAPO15273 167 aa6.9□□□□□ -1.3
SYNGAP1-223ENST00000637671 RPL28P46779 137 aaKnown RBP6.9□□□□□ -1.3
SYNGAP1-223ENST00000637671 LBHQ53QV2 105 aaPredicted RBP6.9□□□□□ -1.3
SYNGAP1-223ENST00000637671 SPANXA1Q9NS26 97 aa6.9□□□□□ -1.3
SYNGAP1-223ENST00000637671 A0A087X002 238 aa6.89□□□□□ -1.31
SYNGAP1-223ENST00000637671 RGS21Q2M5E4 152 aa6.89□□□□□ -1.31
SYNGAP1-223ENST00000637671 C9orf129Q5T035 196 aaKnown RBP6.89□□□□□ -1.31
SYNGAP1-223ENST00000637671 NRACQ8N912 160 aa6.89□□□□□ -1.31
SYNGAP1-223ENST00000637671 CTDSP1Q9GZU7 261 aa6.89□□□□□ -1.31
SYNGAP1-223ENST00000637671 RPL39P62891 51 aaKnown RBP6.88□□□□□ -1.31
SYNGAP1-223ENST00000637671 MRPS36P82909 103 aaKnown RBP6.88□□□□□ -1.31
SYNGAP1-223ENST00000637671 RIGQ13278 110 aa6.88□□□□□ -1.31
SYNGAP1-223ENST00000637671 TPRXLQ17RH7 258 aa6.88□□□□□ -1.31
SYNGAP1-223ENST00000637671 RETNLBQ9BQ08 111 aa6.88□□□□□ -1.31
SYNGAP1-223ENST00000637671 FSIP2Q5CZC0 6907 aa6.87□□□□□ -1.31
SYNGAP1-223ENST00000637671 TMEM250H0YL14 139 aa6.87□□□□□ -1.31
SYNGAP1-223ENST00000637671 KIAA0087Q14695 138 aa6.87□□□□□ -1.31
SYNGAP1-223ENST00000637671 C2orf82Q6UX34 121 aa6.87□□□□□ -1.31
SYNGAP1-223ENST00000637671 C20orf78Q9BR46 151 aa6.87□□□□□ -1.31
SYNGAP1-223ENST00000637671 BCE1O60756 84 aa6.86□□□□□ -1.31
SYNGAP1-223ENST00000637671 CEBPGP53567 150 aa6.86□□□□□ -1.31
SYNGAP1-223ENST00000637671 C22orf24Q9Y442 160 aa6.86□□□□□ -1.31
SYNGAP1-223ENST00000637671 IGLV7-46A0A075B6I9 117 aa6.85□□□□□ -1.31
SYNGAP1-223ENST00000637671 LINC00173Q6ZV60 143 aa6.85□□□□□ -1.31
SYNGAP1-223ENST00000637671 LINC00304Q8N9R0 145 aa6.85□□□□□ -1.31
SYNGAP1-223ENST00000637671 LINC00862A6NCI5 91 aa6.84□□□□□ -1.31
SYNGAP1-223ENST00000637671 ZNF727A8MUV8 499 aa6.84□□□□□ -1.31
SYNGAP1-223ENST00000637671 PRSS2P07478 247 aa6.84□□□□□ -1.31
SYNGAP1-223ENST00000637671 RPL32P62910 135 aaKnown RBP6.84□□□□□ -1.31
SYNGAP1-223ENST00000637671 FAM104AQ969W3 186 aa6.84□□□□□ -1.31
SYNGAP1-223ENST00000637671 TRBV24-1A0A075B6N3 115 aa6.83□□□□□ -1.32
SYNGAP1-223ENST00000637671 CKS2P33552 79 aa6.83□□□□□ -1.32
SYNGAP1-223ENST00000637671 IFI27P40305 119 aaPredicted RBP6.83□□□□□ -1.32
SYNGAP1-223ENST00000637671 CKS1BP61024 79 aa6.83□□□□□ -1.32
SYNGAP1-223ENST00000637671 MRPL51Q4U2R6 128 aaKnown RBP6.83□□□□□ -1.32
SYNGAP1-223ENST00000637671 FAM104BQ5XKR9 115 aa6.83□□□□□ -1.32
SYNGAP1-223ENST00000637671 MRPL55Q7Z7F7 128 aaKnown RBP6.83□□□□□ -1.32
SYNGAP1-223ENST00000637671 LINC00469Q8N7U9 141 aa6.83□□□□□ -1.32
SYNGAP1-223ENST00000637671 SMIM2Q9BVW6 85 aa6.83□□□□□ -1.32
SYNGAP1-223ENST00000637671 OSTCQ9NRP0 149 aa6.83□□□□□ -1.32
SYNGAP1-223ENST00000637671 LINC01547P58512 204 aaPredicted RBP6.82□□□□□ -1.32
SYNGAP1-223ENST00000637671 LINC00242Q5T6M2 205 aa6.82□□□□□ -1.32
SYNGAP1-223ENST00000637671 LCE2DQ5TA82 110 aaPredicted RBP6.82□□□□□ -1.32
SYNGAP1-223ENST00000637671 LINC01551Q86U37 167 aa6.82□□□□□ -1.32
SYNGAP1-223ENST00000637671 SMIM7Q9BQ49 75 aa6.82□□□□□ -1.32
SYNGAP1-223ENST00000637671 XAGE1AQ9HD64 81 aa6.82□□□□□ -1.32
SYNGAP1-223ENST00000637671 BATF3Q9NR55 127 aa6.82□□□□□ -1.32
SYNGAP1-223ENST00000637671 ANAPC11Q9NYG5 84 aa6.82□□□□□ -1.32
SYNGAP1-223ENST00000637671 TP73-AS1Q9UF72 201 aa6.82□□□□□ -1.32
SYNGAP1-223ENST00000637671 TNFRSF6BO95407 300 aa6.81□□□□□ -1.32
SYNGAP1-223ENST00000637671 FAM229BQ4G0N7 80 aa6.81□□□□□ -1.32
SYNGAP1-223ENST00000637671 SLC51BQ86UW2 128 aa6.81□□□□□ -1.32
SYNGAP1-223ENST00000637671 LINC01561Q8N1V8 128 aa6.81□□□□□ -1.32
SYNGAP1-223ENST00000637671 CRCT1Q9UGL9 99 aa6.81□□□□□ -1.32
SYNGAP1-223ENST00000637671 NAT8BQ9UHF3 227 aa6.81□□□□□ -1.32
SYNGAP1-223ENST00000637671 IGKV2D-26A0A0A0MRZ7 120 aa6.8□□□□□ -1.32
SYNGAP1-223ENST00000637671 RAB5AP20339 215 aa6.8□□□□□ -1.32
SYNGAP1-223ENST00000637671 UBE2AP49459 152 aa6.8□□□□□ -1.32
SYNGAP1-223ENST00000637671 CTAG1AP78358 180 aa6.8□□□□□ -1.32
SYNGAP1-223ENST00000637671 KRTAP13-2Q52LG2 175 aa6.8□□□□□ -1.32
SYNGAP1-223ENST00000637671 TMEM141Q96I45 108 aa6.8□□□□□ -1.32
SYNGAP1-223ENST00000637671 C2orf88Q9BSF0 95 aa6.8□□□□□ -1.32
SYNGAP1-223ENST00000637671 TOMM7Q9P0U1 55 aa6.8□□□□□ -1.32
SYNGAP1-223ENST00000637671 A0A1B0GW15 77 aa6.79□□□□□ -1.32
SYNGAP1-223ENST00000637671 C6orf226Q5I0X4 101 aa6.79□□□□□ -1.32
SYNGAP1-223ENST00000637671 Q6ZN92 141 aa6.79□□□□□ -1.32
SYNGAP1-223ENST00000637671 TEX43Q6ZNM6 134 aa6.79□□□□□ -1.32
SYNGAP1-223ENST00000637671 PPDPFQ9H3Y8 114 aa6.79□□□□□ -1.32
SYNGAP1-223ENST00000637671 V9GYV3 84 aa6.79□□□□□ -1.32
SYNGAP1-223ENST00000637671 IGLV4-3A0A075B6K6 122 aa6.78□□□□□ -1.32
SYNGAP1-223ENST00000637671 RPL37AP8A6NKH3 93 aa6.78□□□□□ -1.32
SYNGAP1-223ENST00000637671 D6R8Y8 96 aa6.78□□□□□ -1.32
SYNGAP1-223ENST00000637671 PYGO1Q9Y3Y4 419 aa6.78□□□□□ -1.32
SYNGAP1-223ENST00000637671 F8W036 122 aa6.77□□□□□ -1.33
SYNGAP1-223ENST00000637671 S100A8P05109 93 aa6.77□□□□□ -1.33
SYNGAP1-223ENST00000637671 BLOC1S1P78537 153 aa6.77□□□□□ -1.33
SYNGAP1-223ENST00000637671 Q8IZM0 81 aa6.77□□□□□ -1.33
SYNGAP1-223ENST00000637671 ALKBH7Q9BT30 221 aaPredicted RBP6.77□□□□□ -1.33
SYNGAP1-223ENST00000637671 EIF5A2Q9GZV4 153 aaKnown RBP6.77□□□□□ -1.33
SYNGAP1-223ENST00000637671 F8VRH5 84 aa6.76□□□□□ -1.33
SYNGAP1-223ENST00000637671 NPYP01303 97 aa6.76□□□□□ -1.33
SYNGAP1-223ENST00000637671 FAM74A3Q4VXF1 159 aa6.76□□□□□ -1.33
SYNGAP1-223ENST00000637671 LINC00337Q8N6G1 96 aa6.76□□□□□ -1.33
SYNGAP1-223ENST00000637671 LINC00167Q96N53 147 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms