RNA–Protein interactions for RNA: ENST00000637533.1

MECP2-222, Transcript of methyl-CpG binding protein 2, human

TSL 5

Gene MECP2, Length 140 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MECP2-222	ENST00000637533	GAFA1	Q96PS6	74 aa		0.73	□□□□□ -2.29
MECP2-222	ENST00000637533	C10orf95	Q9H7T3	257 aa		0.73	□□□□□ -2.29
MECP2-222	ENST00000637533	CRIPT	Q9P021	101 aa		0.73	□□□□□ -2.29
MECP2-222	ENST00000637533	TNRC6A	Q8NDV7	1962 aa	Known RBP	0.73	□□□□□ -2.29
MECP2-222	ENST00000637533	DIDO1	Q9BTC0	2240 aa	Known RBP	0.73	□□□□□ -2.29
MECP2-222	ENST00000637533	CCDC88A	Q3V6T2	1871 aa		0.73	□□□□□ -2.29
MECP2-222	ENST00000637533	TANC1	Q9C0D5	1861 aa		0.73	□□□□□ -2.29
MECP2-222	ENST00000637533	UGGT2	Q9NYU1	1516 aa		0.73	□□□□□ -2.29
MECP2-222	ENST00000637533	RP1	P56715	2156 aa		0.73	□□□□□ -2.29
MECP2-222	ENST00000637533	PARP14	Q460N5	1801 aa		0.73	□□□□□ -2.29
MECP2-222	ENST00000637533	PATJ	Q8NI35	1801 aa		0.73	□□□□□ -2.29
MECP2-222	ENST00000637533	PHIP	Q8WWQ0	1821 aa		0.73	□□□□□ -2.29
MECP2-222	ENST00000637533	ZGRF1	Q86YA3	2104 aa		0.73	□□□□□ -2.29
MECP2-222	ENST00000637533	SCN11A	Q9UI33	1791 aa		0.73	□□□□□ -2.29
MECP2-222	ENST00000637533	KMT2B	Q9UMN6	2715 aa	Predicted RBP	0.73	□□□□□ -2.29
MECP2-222	ENST00000637533	LRRC37A	A6NMS7	1700 aa		0.72	□□□□□ -2.29
MECP2-222	ENST00000637533	NOTCH3	Q9UM47	2321 aa		0.72	□□□□□ -2.29
MECP2-222	ENST00000637533	MYH8	P13535	1937 aa		0.72	□□□□□ -2.29
MECP2-222	ENST00000637533	SHROOM2	Q13796	1616 aa		0.72	□□□□□ -2.29
MECP2-222	ENST00000637533	PHRF1	Q9P1Y6	1649 aa	Known RBP	0.72	□□□□□ -2.29
MECP2-222	ENST00000637533	SAMD9	Q5K651	1589 aa		0.72	□□□□□ -2.29
MECP2-222	ENST00000637533	ERCC6L2	Q5T890	1561 aa		0.72	□□□□□ -2.29
MECP2-222	ENST00000637533	LINC01549	A6NIU2	74 aa		0.72	□□□□□ -2.29
MECP2-222	ENST00000637533		I3L3M4	83 aa		0.72	□□□□□ -2.29
MECP2-222	ENST00000637533		K7EIL1	84 aa		0.72	□□□□□ -2.29
MECP2-222	ENST00000637533		M0R3E3	92 aa		0.72	□□□□□ -2.29
MECP2-222	ENST00000637533	KRTAP10-6	P60371	365 aa	Predicted RBP	0.72	□□□□□ -2.29
MECP2-222	ENST00000637533	DEFB114	Q30KQ6	69 aa		0.72	□□□□□ -2.29
MECP2-222	ENST00000637533	DEFB112	Q30KQ8	113 aa		0.72	□□□□□ -2.29
MECP2-222	ENST00000637533	LCE1F	Q5T754	118 aa		0.72	□□□□□ -2.29
MECP2-222	ENST00000637533	WFDC9	Q8NEX5	89 aa		0.72	□□□□□ -2.29
MECP2-222	ENST00000637533	NMES1	Q9C002	83 aa		0.72	□□□□□ -2.29
MECP2-222	ENST00000637533	KIF20B	Q96Q89	1820 aa		0.72	□□□□□ -2.29
MECP2-222	ENST00000637533	CACNA1G	O43497	2377 aa		0.72	□□□□□ -2.29
MECP2-222	ENST00000637533	MAGI3	Q5TCQ9	1506 aa		0.72	□□□□□ -2.29
MECP2-222	ENST00000637533	MPDZ	O75970	2070 aa		0.72	□□□□□ -2.29
MECP2-222	ENST00000637533	MYO18A	Q92614	2054 aa	Known RBP	0.72	□□□□□ -2.29
MECP2-222	ENST00000637533	MYOF	Q9NZM1	2061 aa		0.72	□□□□□ -2.29
MECP2-222	ENST00000637533	RGPD8	O14715	1765 aa	Predicted RBP	0.72	□□□□□ -2.29
MECP2-222	ENST00000637533	RGPD4	Q7Z3J3	1758 aa		0.72	□□□□□ -2.29
MECP2-222	ENST00000637533	RGPD5	Q99666	1765 aa		0.72	□□□□□ -2.29
MECP2-222	ENST00000637533	C1orf167	Q5SNV9	1468 aa		0.72	□□□□□ -2.29
MECP2-222	ENST00000637533	ICE1	Q9Y2F5	2266 aa		0.72	□□□□□ -2.29
MECP2-222	ENST00000637533	COL5A3	P25940	1745 aa	Predicted RBP	0.72	□□□□□ -2.29
MECP2-222	ENST00000637533	ROBO1	Q9Y6N7	1651 aa		0.72	□□□□□ -2.29
MECP2-222	ENST00000637533	PTPRD	P23468	1912 aa		0.72	□□□□□ -2.29
MECP2-222	ENST00000637533	BAHCC1	Q9P281	2608 aa		0.71	□□□□□ -2.3
MECP2-222	ENST00000637533	PLXNA1	Q9UIW2	1896 aa		0.71	□□□□□ -2.3
MECP2-222	ENST00000637533	NEXMIF	Q5QGS0	1516 aa		0.71	□□□□□ -2.3
MECP2-222	ENST00000637533	SPINK4	O60575	86 aa		0.71	□□□□□ -2.3
MECP2-222	ENST00000637533	TFF1	P04155	84 aa		0.71	□□□□□ -2.3
MECP2-222	ENST00000637533	PRB1	P04280	392 aa		0.71	□□□□□ -2.3
MECP2-222	ENST00000637533	KRTAP10-10	P60014	251 aa		0.71	□□□□□ -2.3
MECP2-222	ENST00000637533	KRTAP10-8	P60410	259 aa		0.71	□□□□□ -2.3
MECP2-222	ENST00000637533		Q6ZSA8	131 aa		0.71	□□□□□ -2.3
MECP2-222	ENST00000637533	FN1	P02751	2386 aa	Known RBP	0.71	□□□□□ -2.3
MECP2-222	ENST00000637533	HEATR1	Q9H583	2144 aa	Known RBP	0.71	□□□□□ -2.3
MECP2-222	ENST00000637533	TET3	O43151	1660 aa		0.71	□□□□□ -2.3
MECP2-222	ENST00000637533	SHPRH	Q149N8	1683 aa		0.71	□□□□□ -2.3
MECP2-222	ENST00000637533	PLXNA4	Q9HCM2	1894 aa		0.71	□□□□□ -2.3
MECP2-222	ENST00000637533	CR1	P17927	2039 aa		0.71	□□□□□ -2.3
MECP2-222	ENST00000637533	ABCA8	O94911	1581 aa		0.7	□□□□□ -2.3
MECP2-222	ENST00000637533	TIAM1	Q13009	1591 aa		0.7	□□□□□ -2.3
MECP2-222	ENST00000637533	INO80	Q9ULG1	1556 aa	Predicted RBP	0.7	□□□□□ -2.3
MECP2-222	ENST00000637533	ARFGEF3	Q5TH69	2177 aa		0.7	□□□□□ -2.3
MECP2-222	ENST00000637533	SLIT1	O75093	1534 aa		0.7	□□□□□ -2.3
MECP2-222	ENST00000637533	CTTNBP2	Q8WZ74	1663 aa		0.7	□□□□□ -2.3
MECP2-222	ENST00000637533		A0A087WVE0	104 aa		0.7	□□□□□ -2.3
MECP2-222	ENST00000637533		H3BVH4	76 aa		0.7	□□□□□ -2.3
MECP2-222	ENST00000637533	C3orf79	P0CE67	100 aa		0.7	□□□□□ -2.3
MECP2-222	ENST00000637533	COX7B	P24311	80 aa		0.7	□□□□□ -2.3
MECP2-222	ENST00000637533	KRTAP10-5	P60370	271 aa		0.7	□□□□□ -2.3
MECP2-222	ENST00000637533	DEFB107A	Q8IZN7	70 aa		0.7	□□□□□ -2.3
MECP2-222	ENST00000637533	TP53AIP1	Q9HCN2	124 aa		0.7	□□□□□ -2.3
MECP2-222	ENST00000637533	PLAC8	Q9NZF1	115 aa		0.7	□□□□□ -2.3
MECP2-222	ENST00000637533	AFDN	P55196	1824 aa	Known RBP	0.7	□□□□□ -2.3
MECP2-222	ENST00000637533	ALK	Q9UM73	1620 aa		0.7	□□□□□ -2.3
MECP2-222	ENST00000637533	RGPD3	A6NKT7	1758 aa	Predicted RBP	0.7	□□□□□ -2.3
MECP2-222	ENST00000637533	SIPA1L3	O60292	1781 aa	Predicted RBP	0.7	□□□□□ -2.3
MECP2-222	ENST00000637533	ABCA10	Q8WWZ4	1543 aa		0.69	□□□□□ -2.3
MECP2-222	ENST00000637533	COL4A1	P02462	1669 aa		0.69	□□□□□ -2.3
MECP2-222	ENST00000637533	CHD3	Q12873	2000 aa	Known RBP	0.69	□□□□□ -2.3
MECP2-222	ENST00000637533	MED12	Q93074	2177 aa		0.69	□□□□□ -2.3
MECP2-222	ENST00000637533	EXPH5	Q8NEV8	1989 aa		0.69	□□□□□ -2.3
MECP2-222	ENST00000637533	LYNX1	P0DP58	116 aa		0.69	□□□□□ -2.3
MECP2-222	ENST00000637533	COX6B1	P14854	86 aa		0.69	□□□□□ -2.3
MECP2-222	ENST00000637533		Q5BKY6	102 aa		0.69	□□□□□ -2.3
MECP2-222	ENST00000637533	SSBP3-AS1	Q7Z2R9	100 aa		0.69	□□□□□ -2.3
MECP2-222	ENST00000637533		Q8IZM0	81 aa		0.69	□□□□□ -2.3
MECP2-222	ENST00000637533	CEP192	Q8TEP8	1941 aa		0.69	□□□□□ -2.3
MECP2-222	ENST00000637533	MON2	Q7Z3U7	1717 aa		0.69	□□□□□ -2.3
MECP2-222	ENST00000637533	XRN1	Q8IZH2	1706 aa	Known RBP	0.69	□□□□□ -2.3
MECP2-222	ENST00000637533	PDCD11	Q14690	1871 aa	Known RBP	0.69	□□□□□ -2.3
MECP2-222	ENST00000637533	MED13	Q9UHV7	2174 aa		0.69	□□□□□ -2.3
MECP2-222	ENST00000637533	SHANK1	Q9Y566	2161 aa		0.69	□□□□□ -2.3
MECP2-222	ENST00000637533	ZMYM4	Q5VZL5	1548 aa		0.69	□□□□□ -2.3
MECP2-222	ENST00000637533	BTAF1	O14981	1849 aa		0.68	□□□□□ -2.3
MECP2-222	ENST00000637533	COL5A1	P20908	1838 aa	Predicted RBP	0.68	□□□□□ -2.3
MECP2-222	ENST00000637533	PSME4	Q14997	1843 aa		0.68	□□□□□ -2.3
MECP2-222	ENST00000637533	EML5	Q05BV3	1969 aa		0.68	□□□□□ -2.3

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