RNA–Protein interactions for RNA: ENST00000637475.1

CACNA1A-241, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 1,975 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-241ENST00000637475 TRBV10-1A0A0K0K1A3 114 aa14.05□□□□□ -0.16
CACNA1A-241ENST00000637475 FAM236AA0A1B0GUQ0 79 aa14.05□□□□□ -0.16
CACNA1A-241ENST00000637475 FAM236BA0A1B0GV22 79 aa14.05□□□□□ -0.16
CACNA1A-241ENST00000637475 ATP5J2P56134 94 aa14.05□□□□□ -0.16
CACNA1A-241ENST00000637475 DSCR9P59020 149 aa14.05□□□□□ -0.16
CACNA1A-241ENST00000637475 DAZ2Q13117 558 aaKnown RBP14.05□□□□□ -0.16
CACNA1A-241ENST00000637475 DAZ4Q86SG3 579 aaKnown RBP14.05□□□□□ -0.16
CACNA1A-241ENST00000637475 SMIM20Q8N5G0 67 aa14.05□□□□□ -0.16
CACNA1A-241ENST00000637475 OVOL2Q9BRP0 275 aa14.05□□□□□ -0.16
CACNA1A-241ENST00000637475 DAZ3Q9NR90 486 aaKnown RBP14.05□□□□□ -0.16
CACNA1A-241ENST00000637475 J3QLI3 93 aa14.04□□□□□ -0.16
CACNA1A-241ENST00000637475 LY6G6DO95868 133 aa14.04□□□□□ -0.16
CACNA1A-241ENST00000637475 Q8N2B8 174 aa14.04□□□□□ -0.16
CACNA1A-241ENST00000637475 ZANQ9Y493 2812 aa14.04□□□□□ -0.16
CACNA1A-241ENST00000637475 IGHV3-38A0A0C4DH36 116 aa14.03□□□□□ -0.16
CACNA1A-241ENST00000637475 INSP01308 110 aa14.03□□□□□ -0.16
CACNA1A-241ENST00000637475 HTN1P15515 57 aa14.03□□□□□ -0.16
CACNA1A-241ENST00000637475 RPL28P46779 137 aaKnown RBP14.03□□□□□ -0.16
CACNA1A-241ENST00000637475 KRTAP21-3Q3LHN1 58 aa14.03□□□□□ -0.16
CACNA1A-241ENST00000637475 ZNF702PQ9H963 129 aa14.03□□□□□ -0.16
CACNA1A-241ENST00000637475 NSD1Q96L73 2696 aaPredicted RBP14.03□□□□□ -0.16
CACNA1A-241ENST00000637475 BAALC-AS2P0C853 105 aa14.03□□□□□ -0.16
CACNA1A-241ENST00000637475 VPREB3Q9UKI3 123 aa14.02□□□□□ -0.16
CACNA1A-241ENST00000637475 TRAV13-2A0A0B4J235 113 aa14.02□□□□□ -0.17
CACNA1A-241ENST00000637475 UQCRQO14949 82 aa14.02□□□□□ -0.17
CACNA1A-241ENST00000637475 HIST2H2BDQ6DRA6 164 aa14.02□□□□□ -0.17
CACNA1A-241ENST00000637475 C3orf22Q8N5N4 141 aa14.02□□□□□ -0.17
CACNA1A-241ENST00000637475 MAP6D1Q9H9H5 199 aa14.02□□□□□ -0.17
CACNA1A-241ENST00000637475 PRIMA1Q86XR5 153 aa14.01□□□□□ -0.17
CACNA1A-241ENST00000637475 FN1P02751 2386 aaKnown RBP14□□□□□ -0.17
CACNA1A-241ENST00000637475 HIST1H4AP62805 103 aaKnown RBP14□□□□□ -0.17
CACNA1A-241ENST00000637475 LINC00526Q96FQ7 95 aa14□□□□□ -0.17
CACNA1A-241ENST00000637475 CDC42SE2Q9NRR3 84 aa14□□□□□ -0.17
CACNA1A-241ENST00000637475 FSHBP01225 129 aa13.98□□□□□ -0.17
CACNA1A-241ENST00000637475 PRM2P04554 102 aa13.98□□□□□ -0.17
CACNA1A-241ENST00000637475 LINC01356Q8N9X3 169 aa13.98□□□□□ -0.17
CACNA1A-241ENST00000637475 MAPK1IP1LQ8NDC0 245 aa13.98□□□□□ -0.17
CACNA1A-241ENST00000637475 TLN2Q9Y4G6 2542 aa13.98□□□□□ -0.17
CACNA1A-241ENST00000637475 LINC00694P0DN24 101 aa13.98□□□□□ -0.17
CACNA1A-241ENST00000637475 RPL36AP83881 106 aaKnown RBP13.98□□□□□ -0.17
CACNA1A-241ENST00000637475 RPL36ALQ969Q0 106 aaKnown RBP13.98□□□□□ -0.17
CACNA1A-241ENST00000637475 FAM218AQ96MZ4 157 aa13.97□□□□□ -0.17
CACNA1A-241ENST00000637475 CSPG4Q6UVK1 2322 aa13.96□□□□□ -0.17
CACNA1A-241ENST00000637475 K7EQD1 137 aa13.96□□□□□ -0.18
CACNA1A-241ENST00000637475 MALP21145 153 aa13.96□□□□□ -0.18
CACNA1A-241ENST00000637475 SLURP1P55000 103 aa13.96□□□□□ -0.18
CACNA1A-241ENST00000637475 NTM-AS1Q6ZSK4 140 aa13.96□□□□□ -0.18
CACNA1A-241ENST00000637475 Q6YL49 198 aa13.95□□□□□ -0.18
CACNA1A-241ENST00000637475 OBSCN-AS1Q96MR7 158 aa13.95□□□□□ -0.18
CACNA1A-241ENST00000637475 A0A096LNT2 108 aa13.94□□□□□ -0.18
CACNA1A-241ENST00000637475 INAFM1C9JVW0 142 aa13.94□□□□□ -0.18
CACNA1A-241ENST00000637475 NDUFA7O95182 113 aa13.94□□□□□ -0.18
CACNA1A-241ENST00000637475 SVEP1Q4LDE5 3571 aa13.94□□□□□ -0.18
CACNA1A-241ENST00000637475 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.94□□□□□ -0.18
CACNA1A-241ENST00000637475 CRPP02741 224 aa13.93□□□□□ -0.18
CACNA1A-241ENST00000637475 KRTAP1-1Q07627 177 aa13.92□□□□□ -0.18
CACNA1A-241ENST00000637475 C9orf153Q5TBE3 101 aa13.92□□□□□ -0.18
CACNA1A-241ENST00000637475 C4orf3Q8WVX3 66 aa13.92□□□□□ -0.18
CACNA1A-241ENST00000637475 HIVEP2P31629 2446 aa13.92□□□□□ -0.18
CACNA1A-241ENST00000637475 COX7CP15954 63 aa13.92□□□□□ -0.18
CACNA1A-241ENST00000637475 DEFB114Q30KQ6 69 aa13.92□□□□□ -0.18
CACNA1A-241ENST00000637475 ANK3Q12955 4377 aaKnown RBP13.92□□□□□ -0.18
CACNA1A-241ENST00000637475 TRAV13-1A0A0B4J241 112 aa13.91□□□□□ -0.18
CACNA1A-241ENST00000637475 H0YGX0 51 aa13.91□□□□□ -0.18
CACNA1A-241ENST00000637475 CR1P17927 2039 aa13.91□□□□□ -0.18
CACNA1A-241ENST00000637475 TRAV25A0A0B4J276 109 aa13.91□□□□□ -0.18
CACNA1A-241ENST00000637475 ATOX1O00244 68 aa13.91□□□□□ -0.18
CACNA1A-241ENST00000637475 JMJD1CQ15652 2540 aa13.9□□□□□ -0.18
CACNA1A-241ENST00000637475 A0A0U1RRA0 63 aa13.9□□□□□ -0.18
CACNA1A-241ENST00000637475 CRYGAP11844 174 aa13.9□□□□□ -0.18
CACNA1A-241ENST00000637475 C1orf158Q8N1D5 194 aa13.9□□□□□ -0.18
CACNA1A-241ENST00000637475 C2orf48Q96LS8 159 aa13.9□□□□□ -0.18
CACNA1A-241ENST00000637475 IGKV2-28A0A075B6P5 120 aa13.89□□□□□ -0.19
CACNA1A-241ENST00000637475 A0A1B0GX51 115 aa13.89□□□□□ -0.19
CACNA1A-241ENST00000637475 IGKV2D-28P01615 120 aa13.89□□□□□ -0.19
CACNA1A-241ENST00000637475 LINC00337Q8N6G1 96 aa13.89□□□□□ -0.19
CACNA1A-241ENST00000637475 SORL1Q92673 2214 aa13.88□□□□□ -0.19
CACNA1A-241ENST00000637475 Q6JHZ5 121 aa13.88□□□□□ -0.19
CACNA1A-241ENST00000637475 COX7B2Q8TF08 81 aa13.88□□□□□ -0.19
CACNA1A-241ENST00000637475 DYNLRB2Q8TF09 96 aa13.88□□□□□ -0.19
CACNA1A-241ENST00000637475 TMEM243Q9BU79 118 aa13.88□□□□□ -0.19
CACNA1A-241ENST00000637475 C18orf65Q6ZTR6 163 aa13.87□□□□□ -0.19
CACNA1A-241ENST00000637475 TRGV1A0A0A0MS02 117 aa13.86□□□□□ -0.19
CACNA1A-241ENST00000637475 DEFB136Q30KP8 78 aa13.86□□□□□ -0.19
CACNA1A-241ENST00000637475 GAGE2AQ6NT46 116 aa13.86□□□□□ -0.19
CACNA1A-241ENST00000637475 SND1-IT1Q9HBX3 110 aa13.86□□□□□ -0.19
CACNA1A-241ENST00000637475 SONP18583 2426 aaKnown RBP13.86□□□□□ -0.19
CACNA1A-241ENST00000637475 ODF3L2Q3SX64 289 aa13.85□□□□□ -0.19
CACNA1A-241ENST00000637475 MIR7-3HGQ8N6C7 128 aa13.85□□□□□ -0.19
CACNA1A-241ENST00000637475 IBA57-AS1B1ANH7 110 aa13.85□□□□□ -0.19
CACNA1A-241ENST00000637475 KLK5Q9Y337 293 aaPredicted RBP13.85□□□□□ -0.19
CACNA1A-241ENST00000637475 SMIM11BQ8TCY0 68 aa13.84□□□□□ -0.19
CACNA1A-241ENST00000637475 DNHD1Q96M86 4753 aa13.83□□□□□ -0.19
CACNA1A-241ENST00000637475 DNAL4O96015 105 aa13.83□□□□□ -0.2
CACNA1A-241ENST00000637475 XCL2Q9UBD3 114 aa13.83□□□□□ -0.2
CACNA1A-241ENST00000637475 UBE2L6O14933 153 aa13.82□□□□□ -0.2
CACNA1A-241ENST00000637475 RPS28P62857 69 aaKnown RBP13.82□□□□□ -0.2
CACNA1A-241ENST00000637475 RPL18AQ02543 176 aaKnown RBP13.82□□□□□ -0.2
CACNA1A-241ENST00000637475 Q9HAA7 133 aa13.82□□□□□ -0.2
CACNA1A-241ENST00000637475 Q6ZTI0 123 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms