RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-238ENST00000637276 C2CD3Q4AC94 2353 aa12.13□□□□□ -0.47
CACNA1A-238ENST00000637276 LYRM9A8MSI8 78 aa12.13□□□□□ -0.47
CACNA1A-238ENST00000637276 SPANXCQ9NY87 97 aa12.13□□□□□ -0.47
CACNA1A-238ENST00000637276 TNFRSF13BO14836 293 aaPredicted RBP12.12□□□□□ -0.47
CACNA1A-238ENST00000637276 EDN2P20800 178 aa12.12□□□□□ -0.47
CACNA1A-238ENST00000637276 SMIM11BQ8TCY0 68 aa12.12□□□□□ -0.47
CACNA1A-238ENST00000637276 SPACA4Q8TDM5 124 aa12.12□□□□□ -0.47
CACNA1A-238ENST00000637276 CSDC2Q9Y534 153 aaKnown RBP12.12□□□□□ -0.47
CACNA1A-238ENST00000637276 MSMPQ1L6U9 139 aa12.11□□□□□ -0.47
CACNA1A-238ENST00000637276 Q6YL49 198 aa12.11□□□□□ -0.47
CACNA1A-238ENST00000637276 Q6ZSR3 168 aa12.11□□□□□ -0.47
CACNA1A-238ENST00000637276 MAPKAPK5-AS1Q8N8E1 139 aa12.1□□□□□ -0.47
CACNA1A-238ENST00000637276 Q6ZS46 218 aa12.1□□□□□ -0.47
CACNA1A-238ENST00000637276 Q6ZSV7 163 aa12.1□□□□□ -0.47
CACNA1A-238ENST00000637276 TTC28Q96AY4 2481 aa12.1□□□□□ -0.47
CACNA1A-238ENST00000637276 SPINT4Q6UDR6 99 aa12.1□□□□□ -0.47
CACNA1A-238ENST00000637276 FAM19A3Q7Z5A8 133 aa12.1□□□□□ -0.47
CACNA1A-238ENST00000637276 LINC00643Q86TS7 51 aa12.1□□□□□ -0.47
CACNA1A-238ENST00000637276 CEP192Q8TEP8 1941 aa12.1□□□□□ -0.47
CACNA1A-238ENST00000637276 K7EMT4 169 aa12.09□□□□□ -0.47
CACNA1A-238ENST00000637276 MRPS12O15235 138 aaKnown RBP12.09□□□□□ -0.47
CACNA1A-238ENST00000637276 SPANXB1Q9NS25 103 aaPredicted RBP12.09□□□□□ -0.47
CACNA1A-238ENST00000637276 HIGD1BQ9P298 99 aa12.09□□□□□ -0.47
CACNA1A-238ENST00000637276 LINC00308Q8TCZ7 52 aa12.09□□□□□ -0.47
CACNA1A-238ENST00000637276 A0A1W2PNU3 283 aaPredicted RBP12.08□□□□□ -0.48
CACNA1A-238ENST00000637276 IGLV4-3A0A075B6K6 122 aa12.06□□□□□ -0.48
CACNA1A-238ENST00000637276 REG3GQ6UW15 175 aa12.06□□□□□ -0.48
CACNA1A-238ENST00000637276 IGLV1-47P01700 117 aa12.06□□□□□ -0.48
CACNA1A-238ENST00000637276 CCDC179H3BU77 68 aa12.06□□□□□ -0.48
CACNA1A-238ENST00000637276 COL4A3Q01955 1670 aa12.06□□□□□ -0.48
CACNA1A-238ENST00000637276 RBX1P62877 108 aa12.05□□□□□ -0.48
CACNA1A-238ENST00000637276 A8MTW9 85 aa12.05□□□□□ -0.48
CACNA1A-238ENST00000637276 M0R378 163 aa12.05□□□□□ -0.48
CACNA1A-238ENST00000637276 LST1O00453 97 aa12.05□□□□□ -0.48
CACNA1A-238ENST00000637276 KRTAP27-1Q3LI81 207 aa12.04□□□□□ -0.48
CACNA1A-238ENST00000637276 PDE6GP18545 87 aa12.04□□□□□ -0.48
CACNA1A-238ENST00000637276 C1orf229Q6ZS94 237 aaPredicted RBP12.04□□□□□ -0.48
CACNA1A-238ENST00000637276 C2orf48Q96LS8 159 aa12.04□□□□□ -0.48
CACNA1A-238ENST00000637276 RNASE3P12724 160 aaKnown RBP12.04□□□□□ -0.48
CACNA1A-238ENST00000637276 LINC00694P0DN24 101 aa12.04□□□□□ -0.48
CACNA1A-238ENST00000637276 CHTF8P0CG12 524 aa12.03□□□□□ -0.48
CACNA1A-238ENST00000637276 C19orf71A6NCJ1 209 aa12.03□□□□□ -0.48
CACNA1A-238ENST00000637276 RPL28P46779 137 aaKnown RBP12.03□□□□□ -0.48
CACNA1A-238ENST00000637276 A0A1B0GXF2 115 aa12.02□□□□□ -0.48
CACNA1A-238ENST00000637276 IGFL2Q6UWQ7 119 aa12.02□□□□□ -0.48
CACNA1A-238ENST00000637276 Q9BRP9 147 aa12.02□□□□□ -0.48
CACNA1A-238ENST00000637276 Q8NA96 180 aa12.01□□□□□ -0.49
CACNA1A-238ENST00000637276 LINC00959A0A1B0GUT2 108 aa12.01□□□□□ -0.49
CACNA1A-238ENST00000637276 C1orf134Q5TEV5 83 aa12.01□□□□□ -0.49
CACNA1A-238ENST00000637276 DHRS4-AS1Q9P1J3 65 aa12.01□□□□□ -0.49
CACNA1A-238ENST00000637276 CYSRT1A8MQ03 144 aa12□□□□□ -0.49
CACNA1A-238ENST00000637276 COX6A2Q02221 97 aa12□□□□□ -0.49
CACNA1A-238ENST00000637276 ZNF22P17026 224 aaPredicted RBP12□□□□□ -0.49
CACNA1A-238ENST00000637276 UNQ6190/PRO20217Q6UXQ8 127 aa12□□□□□ -0.49
CACNA1A-238ENST00000637276 HCG22E2RYF7 251 aa11.99□□□□□ -0.49
CACNA1A-238ENST00000637276 UQCRQO14949 82 aa11.99□□□□□ -0.49
CACNA1A-238ENST00000637276 J3QL48 77 aa11.99□□□□□ -0.49
CACNA1A-238ENST00000637276 CRIP1P50238 77 aa11.99□□□□□ -0.49
CACNA1A-238ENST00000637276 H0Y9P7 68 aa11.99□□□□□ -0.49
CACNA1A-238ENST00000637276 PRORYQ9H606 182 aa11.99□□□□□ -0.49
CACNA1A-238ENST00000637276 TRBV30A0A0K0K1B3 111 aa11.98□□□□□ -0.49
CACNA1A-238ENST00000637276 A0A087WVE0 104 aa11.98□□□□□ -0.49
CACNA1A-238ENST00000637276 LMO4P61968 165 aa11.97□□□□□ -0.49
CACNA1A-238ENST00000637276 Q6ZTC4 211 aa11.97□□□□□ -0.49
CACNA1A-238ENST00000637276 ANKHD1Q8IWZ3 2542 aaKnown RBP11.97□□□□□ -0.49
CACNA1A-238ENST00000637276 SMIM9A6NGZ8 99 aa11.95□□□□□ -0.5
CACNA1A-238ENST00000637276 IBA57-AS1B1ANH7 110 aa11.95□□□□□ -0.5
CACNA1A-238ENST00000637276 MBD6Q96DN6 1003 aa11.95□□□□□ -0.5
CACNA1A-238ENST00000637276 COX6B2Q6YFQ2 88 aa11.95□□□□□ -0.5
CACNA1A-238ENST00000637276 LINC01006Q8NI28 216 aa11.95□□□□□ -0.5
CACNA1A-238ENST00000637276 U3KQK5 164 aa11.95□□□□□ -0.5
CACNA1A-238ENST00000637276 PIEZO2Q9H5I5 2752 aa11.94□□□□□ -0.5
CACNA1A-238ENST00000637276 ACYP2P14621 99 aa11.94□□□□□ -0.5
CACNA1A-238ENST00000637276 COL5A1P20908 1838 aaPredicted RBP11.94□□□□□ -0.5
CACNA1A-238ENST00000637276 LINC00474Q9P2X8 69 aa11.93□□□□□ -0.5
CACNA1A-238ENST00000637276 LELP1Q5T871 98 aa11.93□□□□□ -0.5
CACNA1A-238ENST00000637276 CD164L2Q6UWJ8 174 aa11.93□□□□□ -0.5
CACNA1A-238ENST00000637276 M0QY20 66 aa11.93□□□□□ -0.5
CACNA1A-238ENST00000637276 K7EQG2 157 aa11.93□□□□□ -0.5
CACNA1A-238ENST00000637276 A0A087WSZ3 146 aa11.92□□□□□ -0.5
CACNA1A-238ENST00000637276 RNF185Q96GF1 192 aa11.92□□□□□ -0.5
CACNA1A-238ENST00000637276 GAS8-AS1O95177 125 aa11.92□□□□□ -0.5
CACNA1A-238ENST00000637276 A0A087WYN8 130 aa11.92□□□□□ -0.5
CACNA1A-238ENST00000637276 WDR87Q6ZQQ6 2873 aa11.92□□□□□ -0.5
CACNA1A-238ENST00000637276 TRBV10-3A0A0K0K1G6 114 aa11.92□□□□□ -0.5
CACNA1A-238ENST00000637276 ZNF702PQ9H963 129 aa11.91□□□□□ -0.5
CACNA1A-238ENST00000637276 LINC00575Q6W349 94 aa11.89□□□□□ -0.51
CACNA1A-238ENST00000637276 PRR9Q5T870 116 aa11.89□□□□□ -0.51
CACNA1A-238ENST00000637276 SPRY4Q9C004 299 aa11.89□□□□□ -0.51
CACNA1A-238ENST00000637276 LINC00242Q5T6M2 205 aa11.88□□□□□ -0.51
CACNA1A-238ENST00000637276 ODF3BA8MYP8 253 aa11.88□□□□□ -0.51
CACNA1A-238ENST00000637276 ALPK3Q96L96 1907 aa11.88□□□□□ -0.51
CACNA1A-238ENST00000637276 TSHBP01222 138 aa11.87□□□□□ -0.51
CACNA1A-238ENST00000637276 hDV103S1A0JD37 113 aa11.87□□□□□ -0.51
CACNA1A-238ENST00000637276 LRP4O75096 1905 aa11.86□□□□□ -0.51
CACNA1A-238ENST00000637276 FHL2Q14192 279 aa11.86□□□□□ -0.51
CACNA1A-238ENST00000637276 IMUPQ9GZP8 106 aa11.86□□□□□ -0.51
CACNA1A-238ENST00000637276 APLNQ9ULZ1 77 aa11.86□□□□□ -0.51
CACNA1A-238ENST00000637276 MOBPQ13875 183 aa11.85□□□□□ -0.51
CACNA1A-238ENST00000637276 BRWD1-AS2P59051 145 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms