RNA–Protein interactions for RNA: ENST00000637226.1

GABRB3-222, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-222ENST00000637226 LINC01558Q9Y6Z2 57 aa-2.37□□□□□ -2.79
GABRB3-222ENST00000637226 DISP2A7MBM2 1401 aa-2.37□□□□□ -2.79
GABRB3-222ENST00000637226 MYH6P13533 1939 aa-2.37□□□□□ -2.79
GABRB3-222ENST00000637226 DYNC1H1Q14204 4646 aaKnown RBP-2.38□□□□□ -2.79
GABRB3-222ENST00000637226 TRAV13-2A0A0B4J235 113 aa-2.38□□□□□ -2.79
GABRB3-222ENST00000637226 C9orf92A6NGG3 77 aa-2.38□□□□□ -2.79
GABRB3-222ENST00000637226 NDUFB6O95139 128 aa-2.38□□□□□ -2.79
GABRB3-222ENST00000637226 TNFSF15O95150 251 aa-2.38□□□□□ -2.79
GABRB3-222ENST00000637226 CMPK1P30085 196 aa-2.38□□□□□ -2.79
GABRB3-222ENST00000637226 B2MP61769 119 aa-2.38□□□□□ -2.79
GABRB3-222ENST00000637226 TMEM128Q5BJH2 165 aa-2.38□□□□□ -2.79
GABRB3-222ENST00000637226 TAC4Q86UU9 113 aa-2.38□□□□□ -2.79
GABRB3-222ENST00000637226 FDCSPQ8NFU4 85 aa-2.38□□□□□ -2.79
GABRB3-222ENST00000637226 ANKRD50Q9ULJ7 1429 aa-2.38□□□□□ -2.79
GABRB3-222ENST00000637226 MTORP42345 2549 aa-2.38□□□□□ -2.79
GABRB3-222ENST00000637226 TRAV36DV7A0A075B6V5 113 aa-2.39□□□□□ -2.79
GABRB3-222ENST00000637226 SCTP09683 121 aa-2.39□□□□□ -2.79
GABRB3-222ENST00000637226 CHMP6Q96FZ7 201 aa-2.39□□□□□ -2.79
GABRB3-222ENST00000637226 PCBD2Q9H0N5 130 aa-2.39□□□□□ -2.79
GABRB3-222ENST00000637226 COL14A1Q05707 1796 aaKnown RBP-2.39□□□□□ -2.79
GABRB3-222ENST00000637226 CDK5RAP2Q96SN8 1893 aa-2.39□□□□□ -2.79
GABRB3-222ENST00000637226 ARAP2Q8WZ64 1704 aa-2.39□□□□□ -2.79
GABRB3-222ENST00000637226 CCDC168Q8NDH2 2452 aa-2.4□□□□□ -2.79
GABRB3-222ENST00000637226 PPIP5K1Q6PFW1 1433 aa-2.4□□□□□ -2.79
GABRB3-222ENST00000637226 MGPP08493 103 aa-2.4□□□□□ -2.79
GABRB3-222ENST00000637226 RPS28P62857 69 aaKnown RBP-2.4□□□□□ -2.79
GABRB3-222ENST00000637226 Q6ZUT4 128 aa-2.4□□□□□ -2.79
GABRB3-222ENST00000637226 HIGD1AQ9Y241 93 aa-2.4□□□□□ -2.79
GABRB3-222ENST00000637226 ZFHX3Q15911 3703 aa-2.4□□□□□ -2.79
GABRB3-222ENST00000637226 NKTRP30414 1462 aaKnown RBP-2.4□□□□□ -2.79
GABRB3-222ENST00000637226 CCDC141Q6ZP82 1450 aa-2.4□□□□□ -2.79
GABRB3-222ENST00000637226 GCN1Q92616 2671 aaKnown RBP-2.41□□□□□ -2.79
GABRB3-222ENST00000637226 A0A0G2JMZ2 1700 aa-2.41□□□□□ -2.8
GABRB3-222ENST00000637226 A0A1B0GX51 115 aa-2.42□□□□□ -2.8
GABRB3-222ENST00000637226 E2F6O75461 281 aa-2.42□□□□□ -2.8
GABRB3-222ENST00000637226 SFT2D2O95562 160 aa-2.42□□□□□ -2.8
GABRB3-222ENST00000637226 RRAS2P62070 204 aaPredicted RBP-2.42□□□□□ -2.8
GABRB3-222ENST00000637226 HIST1H1AQ02539 215 aaPredicted RBP-2.42□□□□□ -2.8
GABRB3-222ENST00000637226 MMGT1Q8N4V1 131 aa-2.42□□□□□ -2.8
GABRB3-222ENST00000637226 LINC01600Q96MT4 127 aa-2.42□□□□□ -2.8
GABRB3-222ENST00000637226 DYNLRB1Q9NP97 96 aa-2.42□□□□□ -2.8
GABRB3-222ENST00000637226 CRIPTQ9P021 101 aa-2.42□□□□□ -2.8
GABRB3-222ENST00000637226 CICQ96RK0 1608 aaPredicted RBP-2.42□□□□□ -2.8
GABRB3-222ENST00000637226 UTP20O75691 2785 aaKnown RBP-2.43□□□□□ -2.8
GABRB3-222ENST00000637226 ZNF518AQ6AHZ1 1483 aa-2.43□□□□□ -2.8
GABRB3-222ENST00000637226 FAM236AA0A1B0GUQ0 79 aa-2.43□□□□□ -2.8
GABRB3-222ENST00000637226 FAM236BA0A1B0GV22 79 aa-2.43□□□□□ -2.8
GABRB3-222ENST00000637226 TMEM238C9JI98 176 aa-2.43□□□□□ -2.8
GABRB3-222ENST00000637226 I3L3M4 83 aa-2.43□□□□□ -2.8
GABRB3-222ENST00000637226 UBA52P62987 128 aaKnown RBP-2.43□□□□□ -2.8
GABRB3-222ENST00000637226 TFAMQ00059 246 aaKnown RBP-2.43□□□□□ -2.8
GABRB3-222ENST00000637226 SPEF2Q9C093 1822 aa-2.43□□□□□ -2.8
GABRB3-222ENST00000637226 LRRK2Q5S007 2527 aa-2.43□□□□□ -2.8
GABRB3-222ENST00000637226 FAM186AA6NE01 2351 aa-2.44□□□□□ -2.8
GABRB3-222ENST00000637226 MARF1Q9Y4F3 1742 aaKnown RBP-2.44□□□□□ -2.8
GABRB3-222ENST00000637226 S100GP29377 79 aa-2.44□□□□□ -2.8
GABRB3-222ENST00000637226 BTG2P78543 158 aa-2.44□□□□□ -2.8
GABRB3-222ENST00000637226 AKAP14Q86UN6 197 aa-2.44□□□□□ -2.8
GABRB3-222ENST00000637226 MGST2Q99735 147 aa-2.44□□□□□ -2.8
GABRB3-222ENST00000637226 COL12A1Q99715 3063 aa-2.44□□□□□ -2.8
GABRB3-222ENST00000637226 SPRR4Q96PI1 79 aa-2.45□□□□□ -2.8
GABRB3-222ENST00000637226 FAIMQ9NVQ4 179 aa-2.45□□□□□ -2.8
GABRB3-222ENST00000637226 PDE4DIPQ5VU43 2346 aa-2.45□□□□□ -2.8
GABRB3-222ENST00000637226 NBEAL2Q6ZNJ1 2754 aa-2.46□□□□□ -2.8
GABRB3-222ENST00000637226 QRICH2Q9H0J4 1663 aa-2.46□□□□□ -2.8
GABRB3-222ENST00000637226 PSME4Q14997 1843 aa-2.46□□□□□ -2.8
GABRB3-222ENST00000637226 PIGBOS1A0A0B4J2F0 54 aa-2.46□□□□□ -2.8
GABRB3-222ENST00000637226 HMGN4O00479 90 aa-2.46□□□□□ -2.8
GABRB3-222ENST00000637226 HEPN1Q6WQI6 88 aa-2.46□□□□□ -2.8
GABRB3-222ENST00000637226 SKA2Q8WVK7 121 aaPredicted RBP-2.46□□□□□ -2.8
GABRB3-222ENST00000637226 CDC42SE2Q9NRR3 84 aa-2.46□□□□□ -2.8
GABRB3-222ENST00000637226 DNAH8Q96JB1 4490 aa-2.46□□□□□ -2.8
GABRB3-222ENST00000637226 CELSR3Q9NYQ7 3312 aa-2.46□□□□□ -2.8
GABRB3-222ENST00000637226 ANKRD30AQ9BXX3 1397 aa-2.47□□□□□ -2.8
GABRB3-222ENST00000637226 XRN1Q8IZH2 1706 aaKnown RBP-2.47□□□□□ -2.8
GABRB3-222ENST00000637226 TRAV30A0A087WSZ9 112 aa-2.47□□□□□ -2.8
GABRB3-222ENST00000637226 LOC285095A0A1B0GVY8 99 aa-2.47□□□□□ -2.8
GABRB3-222ENST00000637226 FAM167A-AS1Q96KT0 104 aa-2.47□□□□□ -2.8
GABRB3-222ENST00000637226 PRG4Q92954 1404 aaPredicted RBP-2.48□□□□□ -2.81
GABRB3-222ENST00000637226 A0A1B0GV72 72 aa-2.48□□□□□ -2.81
GABRB3-222ENST00000637226 H0YAA0 97 aa-2.48□□□□□ -2.81
GABRB3-222ENST00000637226 WFDC13Q8IUB5 93 aa-2.48□□□□□ -2.81
GABRB3-222ENST00000637226 PRO1933Q9H354 126 aa-2.48□□□□□ -2.81
GABRB3-222ENST00000637226 FRYQ5TBA9 3013 aa-2.49□□□□□ -2.81
GABRB3-222ENST00000637226 MYOM1P52179 1685 aa-2.49□□□□□ -2.81
GABRB3-222ENST00000637226 C1orf167Q5SNV9 1468 aa-2.49□□□□□ -2.81
GABRB3-222ENST00000637226 K7EP34 96 aa-2.49□□□□□ -2.81
GABRB3-222ENST00000637226 IGLC6P0CF74 106 aa-2.49□□□□□ -2.81
GABRB3-222ENST00000637226 IGLC1P0CG04 106 aa-2.49□□□□□ -2.81
GABRB3-222ENST00000637226 G0S2P27469 103 aa-2.49□□□□□ -2.81
GABRB3-222ENST00000637226 LELP1Q5T871 98 aa-2.49□□□□□ -2.81
GABRB3-222ENST00000637226 CDKN2A-AS1Q9UH64 79 aa-2.49□□□□□ -2.81
GABRB3-222ENST00000637226 E5RI56 91 aa-2.5□□□□□ -2.81
GABRB3-222ENST00000637226 CCL22O00626 93 aa-2.5□□□□□ -2.81
GABRB3-222ENST00000637226 HIST1H1DP16402 221 aaKnown RBP-2.5□□□□□ -2.81
GABRB3-222ENST00000637226 DEFB1P60022 68 aa-2.5□□□□□ -2.81
GABRB3-222ENST00000637226 SEC11AP67812 179 aa-2.5□□□□□ -2.81
GABRB3-222ENST00000637226 MRPL54Q6P161 138 aaKnown RBP-2.5□□□□□ -2.81
GABRB3-222ENST00000637226 LCN9Q8WX39 176 aa-2.5□□□□□ -2.81
GABRB3-222ENST00000637226 OVOS2A0A0J9YW53 1432 aa-2.51□□□□□ -2.81
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms