RNA–Protein interactions for RNA: ENST00000637223.1

CLN6-218, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-218ENST00000637223 JOSD1Q15040 202 aaPredicted RBP11.34□□□□□ -0.59
CLN6-218ENST00000637223 SS18Q15532 418 aa11.34□□□□□ -0.59
CLN6-218ENST00000637223 Q8N814 137 aa11.34□□□□□ -0.59
CLN6-218ENST00000637223 TOMM6Q96B49 74 aa11.34□□□□□ -0.59
CLN6-218ENST00000637223 ATP5LO75964 103 aa11.33□□□□□ -0.6
CLN6-218ENST00000637223 DYNC1H1Q14204 4646 aaKnown RBP11.32□□□□□ -0.6
CLN6-218ENST00000637223 IGIPA6NJ69 53 aa11.32□□□□□ -0.6
CLN6-218ENST00000637223 USP17L23D6RBM5 183 aa11.32□□□□□ -0.6
CLN6-218ENST00000637223 TMEM141Q96I45 108 aa11.32□□□□□ -0.6
CLN6-218ENST00000637223 MAP1LC3CQ9BXW4 147 aa11.32□□□□□ -0.6
CLN6-218ENST00000637223 DNAH5Q8TE73 4624 aa11.31□□□□□ -0.6
CLN6-218ENST00000637223 NPSP0C0P6 89 aa11.31□□□□□ -0.6
CLN6-218ENST00000637223 FOXI1Q12951 378 aa11.31□□□□□ -0.6
CLN6-218ENST00000637223 ZC2HC1BQ5TFG8 222 aa11.31□□□□□ -0.6
CLN6-218ENST00000637223 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.3□□□□□ -0.6
CLN6-218ENST00000637223 C16orf90A8MZG2 172 aa11.3□□□□□ -0.6
CLN6-218ENST00000637223 PMCHL1Q16048 86 aa11.3□□□□□ -0.6
CLN6-218ENST00000637223 PET117Q6UWS5 81 aa11.3□□□□□ -0.6
CLN6-218ENST00000637223 Q6ZN92 141 aa11.3□□□□□ -0.6
CLN6-218ENST00000637223 SCGB3A1Q96QR1 104 aa11.3□□□□□ -0.6
CLN6-218ENST00000637223 C3orf79P0CE67 100 aa11.29□□□□□ -0.6
CLN6-218ENST00000637223 TEX43Q6ZNM6 134 aa11.29□□□□□ -0.6
CLN6-218ENST00000637223 TIMM17AQ99595 171 aa11.29□□□□□ -0.6
CLN6-218ENST00000637223 PGPEP1Q9NXJ5 209 aa11.29□□□□□ -0.6
CLN6-218ENST00000637223 C20orf202A1L168 122 aa11.28□□□□□ -0.6
CLN6-218ENST00000637223 SYS1-DBNDD2H3BUS1 97 aa11.28□□□□□ -0.6
CLN6-218ENST00000637223 KRTDAPP60985 99 aa11.28□□□□□ -0.6
CLN6-218ENST00000637223 PYY3Q5JQD4 70 aa11.28□□□□□ -0.6
CLN6-218ENST00000637223 CD164L2Q6UWJ8 174 aa11.28□□□□□ -0.6
CLN6-218ENST00000637223 ERASQ7Z444 233 aa11.28□□□□□ -0.6
CLN6-218ENST00000637223 IFI27L1Q96BM0 104 aa11.28□□□□□ -0.6
CLN6-218ENST00000637223 VCX2Q9H322 139 aa11.28□□□□□ -0.6
CLN6-218ENST00000637223 IGLV5-52A0A0A0MRZ9 124 aa11.27□□□□□ -0.61
CLN6-218ENST00000637223 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.27□□□□□ -0.61
CLN6-218ENST00000637223 C14orf177Q52M58 125 aa11.27□□□□□ -0.61
CLN6-218ENST00000637223 LINC00173Q6ZV60 143 aa11.27□□□□□ -0.61
CLN6-218ENST00000637223 LINC00518Q8N0U6 118 aa11.27□□□□□ -0.61
CLN6-218ENST00000637223 AMELXQ99217 191 aa11.27□□□□□ -0.61
CLN6-218ENST00000637223 C2orf88Q9BSF0 95 aa11.27□□□□□ -0.61
CLN6-218ENST00000637223 PRSS1P07477 247 aa11.26□□□□□ -0.61
CLN6-218ENST00000637223 CDPF1Q6NVV7 123 aa11.26□□□□□ -0.61
CLN6-218ENST00000637223 NTN5Q8WTR8 489 aaPredicted RBP11.26□□□□□ -0.61
CLN6-218ENST00000637223 PAPPA-AS1Q5QFB9 102 aa11.25□□□□□ -0.61
CLN6-218ENST00000637223 C15orf56Q8N910 161 aa11.25□□□□□ -0.61
CLN6-218ENST00000637223 hDV102S1A0JD36 115 aa11.24□□□□□ -0.61
CLN6-218ENST00000637223 COX7A2LO14548 114 aa11.24□□□□□ -0.61
CLN6-218ENST00000637223 SCGB1D1O95968 90 aa11.24□□□□□ -0.61
CLN6-218ENST00000637223 UBE2D1P51668 147 aa11.24□□□□□ -0.61
CLN6-218ENST00000637223 CFAP161Q6P656 301 aa11.24□□□□□ -0.61
CLN6-218ENST00000637223 C5orf38Q86SI9 138 aa11.24□□□□□ -0.61
CLN6-218ENST00000637223 LRP1BQ9NZR2 4599 aa11.24□□□□□ -0.61
CLN6-218ENST00000637223 TRAV12-1A0A0B4J245 112 aa11.23□□□□□ -0.61
CLN6-218ENST00000637223 HIGD2BQ4VC39 106 aa11.23□□□□□ -0.61
CLN6-218ENST00000637223 LINC00242Q5T6M2 205 aa11.23□□□□□ -0.61
CLN6-218ENST00000637223 LINC01545Q5VT33 79 aa11.23□□□□□ -0.61
CLN6-218ENST00000637223 C12orf57Q99622 126 aa11.23□□□□□ -0.61
CLN6-218ENST00000637223 MALP21145 153 aa11.22□□□□□ -0.61
CLN6-218ENST00000637223 IGHV1-58A0A0C4DH39 117 aa11.21□□□□□ -0.61
CLN6-218ENST00000637223 S100A12P80511 92 aa11.21□□□□□ -0.61
CLN6-218ENST00000637223 COX6A2Q02221 97 aa11.21□□□□□ -0.61
CLN6-218ENST00000637223 HSPG2P98160 4391 aa11.21□□□□□ -0.62
CLN6-218ENST00000637223 IGHV3OR16-9A0A0B4J2B5 98 aa11.2□□□□□ -0.62
CLN6-218ENST00000637223 GCSHP23434 173 aa11.2□□□□□ -0.62
CLN6-218ENST00000637223 LINC01620Q4KN68 170 aa11.2□□□□□ -0.62
CLN6-218ENST00000637223 GVQW2A0A096LPI5 108 aaPredicted RBP11.19□□□□□ -0.62
CLN6-218ENST00000637223 KRTAP10-1P60331 282 aa11.19□□□□□ -0.62
CLN6-218ENST00000637223 PMVKQ15126 192 aa11.19□□□□□ -0.62
CLN6-218ENST00000637223 CST9LQ9H4G1 147 aa11.19□□□□□ -0.62
CLN6-218ENST00000637223 A0A0J9YXV3 536 aa11.18□□□□□ -0.62
CLN6-218ENST00000637223 LINC00526Q96FQ7 95 aa11.18□□□□□ -0.62
CLN6-218ENST00000637223 HERC1Q15751 4861 aa11.17□□□□□ -0.62
CLN6-218ENST00000637223 SLPIP03973 132 aa11.17□□□□□ -0.62
CLN6-218ENST00000637223 FAM19A3Q7Z5A8 133 aa11.17□□□□□ -0.62
CLN6-218ENST00000637223 APOMO95445 188 aa11.16□□□□□ -0.62
CLN6-218ENST00000637223 PLNP26678 52 aa11.16□□□□□ -0.62
CLN6-218ENST00000637223 ODF1Q14990 250 aa11.16□□□□□ -0.62
CLN6-218ENST00000637223 GEMIN7Q9H840 131 aaKnown RBP11.16□□□□□ -0.62
CLN6-218ENST00000637223 A0A087WZ39 114 aa11.15□□□□□ -0.62
CLN6-218ENST00000637223 ZNF561-AS1K7EIQ3 104 aa11.15□□□□□ -0.62
CLN6-218ENST00000637223 CDK2AP2O75956 126 aa11.15□□□□□ -0.62
CLN6-218ENST00000637223 CNBPP62633 177 aaKnown RBP11.15□□□□□ -0.62
CLN6-218ENST00000637223 HERVK_113P63121 156 aa11.15□□□□□ -0.62
CLN6-218ENST00000637223 SEC11AP67812 179 aa11.15□□□□□ -0.62
CLN6-218ENST00000637223 ORAOV1Q8WV07 137 aa11.15□□□□□ -0.62
CLN6-218ENST00000637223 IGHV3-64A0A075B6Q5 118 aa11.14□□□□□ -0.63
CLN6-218ENST00000637223 F8VRH5 84 aa11.14□□□□□ -0.63
CLN6-218ENST00000637223 SPAG11BQ08648 103 aa11.14□□□□□ -0.63
CLN6-218ENST00000637223 IGLV4-69A0A075B6H9 119 aa11.13□□□□□ -0.63
CLN6-218ENST00000637223 TINCRA0A1B0GVN0 87 aa11.13□□□□□ -0.63
CLN6-218ENST00000637223 DPM2O94777 84 aa11.13□□□□□ -0.63
CLN6-218ENST00000637223 Q8N1X5 172 aa11.13□□□□□ -0.63
CLN6-218ENST00000637223 LINC00469Q8N7U9 141 aa11.13□□□□□ -0.63
CLN6-218ENST00000637223 VAMP8Q9BV40 100 aa11.13□□□□□ -0.63
CLN6-218ENST00000637223 CDKN2A-AS1Q9UH64 79 aa11.13□□□□□ -0.63
CLN6-218ENST00000637223 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.12□□□□□ -0.63
CLN6-218ENST00000637223 HSBP1L1C9JCN9 74 aa11.12□□□□□ -0.63
CLN6-218ENST00000637223 C9orf163Q8N9P6 203 aa11.12□□□□□ -0.63
CLN6-218ENST00000637223 CHTOPQ9Y3Y2 248 aaKnown RBP11.12□□□□□ -0.63
CLN6-218ENST00000637223 DNAH8Q96JB1 4490 aa11.12□□□□□ -0.63
CLN6-218ENST00000637223 APOBP04114 4563 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms