RNA–Protein interactions for RNA: ENST00000636816.1

CACNA1A-231, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 1,978 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-231	ENST00000636816	MRPL23	Q16540	153 aa	Known RBP	10.96	□□□□□ -0.66
CACNA1A-231	ENST00000636816		Q8N3U1	123 aa		10.96	□□□□□ -0.66
CACNA1A-231	ENST00000636816	TM2D2	Q9BX73	214 aa		10.96	□□□□□ -0.66
CACNA1A-231	ENST00000636816	RBX1	P62877	108 aa		10.95	□□□□□ -0.66
CACNA1A-231	ENST00000636816		A6NDN8	102 aa		10.94	□□□□□ -0.66
CACNA1A-231	ENST00000636816	NANOS2	P60321	138 aa	Known RBP	10.94	□□□□□ -0.66
CACNA1A-231	ENST00000636816	TAL2	Q16559	108 aa		10.94	□□□□□ -0.66
CACNA1A-231	ENST00000636816	C10orf126	Q8N4M7	172 aa		10.94	□□□□□ -0.66
CACNA1A-231	ENST00000636816	ICOS	Q9Y6W8	199 aa		10.94	□□□□□ -0.66
CACNA1A-231	ENST00000636816		H3BRM9	83 aa		10.94	□□□□□ -0.66
CACNA1A-231	ENST00000636816	KPRP	Q5T749	579 aa	Predicted RBP	10.93	□□□□□ -0.66
CACNA1A-231	ENST00000636816		A0A1B0GUV1	79 aa		10.92	□□□□□ -0.66
CACNA1A-231	ENST00000636816	VAMP3	Q15836	100 aa		10.92	□□□□□ -0.66
CACNA1A-231	ENST00000636816	SMIM1	B2RUZ4	78 aa		10.92	□□□□□ -0.66
CACNA1A-231	ENST00000636816		K7ERJ3	54 aa		10.92	□□□□□ -0.66
CACNA1A-231	ENST00000636816	SRSF9	Q13242	221 aa	Known RBP eCLIP	10.92	□□□□□ -0.66
CACNA1A-231	ENST00000636816	CLPSL2	Q6UWE3	100 aa		10.92	□□□□□ -0.66
CACNA1A-231	ENST00000636816	RAB37	Q96AX2	223 aa		10.92	□□□□□ -0.66
CACNA1A-231	ENST00000636816		A0A0J9YXY3	114 aa		10.91	□□□□□ -0.66
CACNA1A-231	ENST00000636816	TM2D3	Q9BRN9	247 aa		10.91	□□□□□ -0.66
CACNA1A-231	ENST00000636816	NDUFA12	Q9UI09	145 aa		10.91	□□□□□ -0.66
CACNA1A-231	ENST00000636816	IGLV5-39	A0A0G2JS06	123 aa		10.9	□□□□□ -0.66
CACNA1A-231	ENST00000636816	LINC00959	A0A1B0GUT2	108 aa		10.9	□□□□□ -0.66
CACNA1A-231	ENST00000636816	C11orf45	Q8TAV5	145 aa		10.9	□□□□□ -0.66
CACNA1A-231	ENST00000636816	NHP2	Q9NX24	153 aa	Known RBP	10.9	□□□□□ -0.66
CACNA1A-231	ENST00000636816	SPATA25	Q9BR10	227 aa		10.9	□□□□□ -0.66
CACNA1A-231	ENST00000636816	NAA38	Q9BRA0	125 aa	Known RBP	10.9	□□□□□ -0.66
CACNA1A-231	ENST00000636816	C9orf118	A6NHY6	69 aa		10.89	□□□□□ -0.67
CACNA1A-231	ENST00000636816	ZFAND6	Q6FIF0	208 aa		10.89	□□□□□ -0.67
CACNA1A-231	ENST00000636816	LYPD5	Q6UWN5	251 aa		10.89	□□□□□ -0.67
CACNA1A-231	ENST00000636816	LELP1	Q5T871	98 aa		10.88	□□□□□ -0.67
CACNA1A-231	ENST00000636816	SPANXB1	Q9NS25	103 aa	Predicted RBP	10.88	□□□□□ -0.67
CACNA1A-231	ENST00000636816	SMIM13	P0DJ93	91 aa		10.88	□□□□□ -0.67
CACNA1A-231	ENST00000636816	LINC00269	Q8N2A0	174 aa		10.88	□□□□□ -0.67
CACNA1A-231	ENST00000636816	IGHV3OR16-9	A0A0B4J2B5	98 aa		10.87	□□□□□ -0.67
CACNA1A-231	ENST00000636816	IGHV3-30	P01768	117 aa		10.87	□□□□□ -0.67
CACNA1A-231	ENST00000636816	IGHV3-30-5	P0DP03	117 aa		10.87	□□□□□ -0.67
CACNA1A-231	ENST00000636816	SH2D6	Q7Z4S9	175 aa		10.87	□□□□□ -0.67
CACNA1A-231	ENST00000636816	DEFB131B	A0A096LNP1	70 aa		10.86	□□□□□ -0.67
CACNA1A-231	ENST00000636816	C5orf38	Q86SI9	138 aa		10.86	□□□□□ -0.67
CACNA1A-231	ENST00000636816	LITAF	Q99732	161 aa		10.86	□□□□□ -0.67
CACNA1A-231	ENST00000636816	ANG	P03950	147 aa	Known RBP	10.86	□□□□□ -0.67
CACNA1A-231	ENST00000636816	ADAMTSL4-AS1	Q5T5F5	129 aa		10.86	□□□□□ -0.67
CACNA1A-231	ENST00000636816		H3BNG1	76 aa		10.85	□□□□□ -0.67
CACNA1A-231	ENST00000636816	XCL1	P47992	114 aa		10.85	□□□□□ -0.67
CACNA1A-231	ENST00000636816	NDUFA1	O15239	70 aa		10.85	□□□□□ -0.67
CACNA1A-231	ENST00000636816	ZNF625	Q96I27	306 aa	Predicted RBP	10.85	□□□□□ -0.67
CACNA1A-231	ENST00000636816		Q9H8V8	135 aa		10.85	□□□□□ -0.67
CACNA1A-231	ENST00000636816		H3BUT2	72 aa		10.84	□□□□□ -0.67
CACNA1A-231	ENST00000636816	SS18	Q15532	418 aa		10.84	□□□□□ -0.67
CACNA1A-231	ENST00000636816	HUWE1	Q7Z6Z7	4374 aa	Known RBP	10.84	□□□□□ -0.67
CACNA1A-231	ENST00000636816	REG3A	Q06141	175 aa		10.83	□□□□□ -0.68
CACNA1A-231	ENST00000636816	MUSTN1	Q8IVN3	82 aa		10.83	□□□□□ -0.68
CACNA1A-231	ENST00000636816	IGLV10-54	A0A075B6I4	117 aa		10.83	□□□□□ -0.68
CACNA1A-231	ENST00000636816		A0A087WZ39	114 aa		10.83	□□□□□ -0.68
CACNA1A-231	ENST00000636816	TMEM238	C9JI98	176 aa		10.82	□□□□□ -0.68
CACNA1A-231	ENST00000636816	ESRG	Q1W209	222 aa		10.82	□□□□□ -0.68
CACNA1A-231	ENST00000636816		A0A1B0GWB2	263 aa		10.81	□□□□□ -0.68
CACNA1A-231	ENST00000636816	GAGE10	A6NGK3	116 aa		10.81	□□□□□ -0.68
CACNA1A-231	ENST00000636816	WFDC10B	Q8IUB3	73 aa		10.81	□□□□□ -0.68
CACNA1A-231	ENST00000636816	TOMM7	Q9P0U1	55 aa		10.81	□□□□□ -0.68
CACNA1A-231	ENST00000636816	IGHV3-33	P01772	117 aa		10.81	□□□□□ -0.68
CACNA1A-231	ENST00000636816	GTF2H5	Q6ZYL4	71 aa		10.81	□□□□□ -0.68
CACNA1A-231	ENST00000636816	DAND5	Q8N907	189 aa		10.81	□□□□□ -0.68
CACNA1A-231	ENST00000636816	COX7B2	Q8TF08	81 aa		10.81	□□□□□ -0.68
CACNA1A-231	ENST00000636816		A0A0U1RRA0	63 aa		10.8	□□□□□ -0.68
CACNA1A-231	ENST00000636816	APOM	O95445	188 aa		10.8	□□□□□ -0.68
CACNA1A-231	ENST00000636816	PRSS2	P07478	247 aa		10.8	□□□□□ -0.68
CACNA1A-231	ENST00000636816	NPC2	P61916	151 aa		10.8	□□□□□ -0.68
CACNA1A-231	ENST00000636816	KLK12	Q9UKR0	248 aa		10.8	□□□□□ -0.68
CACNA1A-231	ENST00000636816		A0A1W2PPM0	123 aa		10.79	□□□□□ -0.68
CACNA1A-231	ENST00000636816		A4D1N5	150 aa		10.79	□□□□□ -0.68
CACNA1A-231	ENST00000636816	EIF4EBP3	O60516	100 aa	Predicted RBP	10.79	□□□□□ -0.68
CACNA1A-231	ENST00000636816	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	10.79	□□□□□ -0.68
CACNA1A-231	ENST00000636816	CFC1B	P0CG36	223 aa		10.79	□□□□□ -0.68
CACNA1A-231	ENST00000636816	CFC1	P0CG37	223 aa		10.79	□□□□□ -0.68
CACNA1A-231	ENST00000636816	IGLL5	B9A064	214 aa		10.78	□□□□□ -0.68
CACNA1A-231	ENST00000636816		K7EP34	96 aa		10.78	□□□□□ -0.68
CACNA1A-231	ENST00000636816	SPANXD	Q9BXN6	97 aa		10.78	□□□□□ -0.68
CACNA1A-231	ENST00000636816	SPANXC	Q9NY87	97 aa		10.78	□□□□□ -0.68
CACNA1A-231	ENST00000636816	MIA	Q16674	131 aa		10.77	□□□□□ -0.68
CACNA1A-231	ENST00000636816	ENHO	Q6UWT2	76 aa		10.77	□□□□□ -0.68
CACNA1A-231	ENST00000636816	COL7A1	Q02388	2944 aa		10.77	□□□□□ -0.69
CACNA1A-231	ENST00000636816	TRAV10	A0A0B4J240	114 aa		10.77	□□□□□ -0.69
CACNA1A-231	ENST00000636816	TIMM17B	O60830	172 aa		10.76	□□□□□ -0.69
CACNA1A-231	ENST00000636816	CD164L2	Q6UWJ8	174 aa		10.76	□□□□□ -0.69
CACNA1A-231	ENST00000636816	PRR34	Q9NV39	138 aa		10.76	□□□□□ -0.69
CACNA1A-231	ENST00000636816	FABP2	P12104	132 aa		10.75	□□□□□ -0.69
CACNA1A-231	ENST00000636816	MEIG1	Q5JSS6	88 aa		10.75	□□□□□ -0.69
CACNA1A-231	ENST00000636816	RPL24	P83731	157 aa	Known RBP	10.74	□□□□□ -0.69
CACNA1A-231	ENST00000636816	FOXI1	Q12951	378 aa		10.74	□□□□□ -0.69
CACNA1A-231	ENST00000636816	PGPEP1	Q9NXJ5	209 aa		10.74	□□□□□ -0.69
CACNA1A-231	ENST00000636816	CIRBP	Q14011	172 aa	Known RBP	10.74	□□□□□ -0.69
CACNA1A-231	ENST00000636816	GAGE12H	A6NDE8	117 aa		10.73	□□□□□ -0.69
CACNA1A-231	ENST00000636816	COX7A2L	O14548	114 aa		10.73	□□□□□ -0.69
CACNA1A-231	ENST00000636816	HERV-K104	P63124	156 aa		10.73	□□□□□ -0.69
CACNA1A-231	ENST00000636816	SPCS1	Q9Y6A9	102 aa		10.73	□□□□□ -0.69
CACNA1A-231	ENST00000636816	C6orf226	Q5I0X4	101 aa		10.72	□□□□□ -0.69
CACNA1A-231	ENST00000636816	UBE2W	Q96B02	151 aa		10.72	□□□□□ -0.69
CACNA1A-231	ENST00000636816	TSPAN13	O95857	204 aa		10.72	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms