RNA–Protein interactions for RNA: ENST00000636058.1

CACNA1A-223, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-223ENST00000636058 MIAQ16674 131 aa6.45□□□□□ -1.38
CACNA1A-223ENST00000636058 UBE2WQ96B02 151 aa6.45□□□□□ -1.38
CACNA1A-223ENST00000636058 TENM2Q9NT68 2774 aa6.45□□□□□ -1.38
CACNA1A-223ENST00000636058 TRAV8-4A0A0B4J246 113 aa6.44□□□□□ -1.38
CACNA1A-223ENST00000636058 IGHV3OR16-9A0A0B4J2B5 98 aa6.44□□□□□ -1.38
CACNA1A-223ENST00000636058 LBHQ53QV2 105 aaPredicted RBP6.44□□□□□ -1.38
CACNA1A-223ENST00000636058 CHCHD10Q8WYQ3 142 aaPredicted RBP6.44□□□□□ -1.38
CACNA1A-223ENST00000636058 KRTAP1-5Q9BYS1 174 aa6.44□□□□□ -1.38
CACNA1A-223ENST00000636058 GEMIN7Q9H840 131 aaKnown RBP6.44□□□□□ -1.38
CACNA1A-223ENST00000636058 DNAH1Q9P2D7 4330 aa6.44□□□□□ -1.38
CACNA1A-223ENST00000636058 VPS13DQ5THJ4 4388 aa6.43□□□□□ -1.38
CACNA1A-223ENST00000636058 IGLV10-54A0A075B6I4 117 aa6.43□□□□□ -1.38
CACNA1A-223ENST00000636058 TRAV8-3A0A0A6YYJ7 113 aa6.43□□□□□ -1.38
CACNA1A-223ENST00000636058 XCL1P47992 114 aa6.43□□□□□ -1.38
CACNA1A-223ENST00000636058 MAJINQ3KP22 176 aa6.43□□□□□ -1.38
CACNA1A-223ENST00000636058 TMEM170BQ5T4T1 132 aa6.43□□□□□ -1.38
CACNA1A-223ENST00000636058 CD164L2Q6UWJ8 174 aa6.43□□□□□ -1.38
CACNA1A-223ENST00000636058 LINC00469Q8N7U9 141 aa6.43□□□□□ -1.38
CACNA1A-223ENST00000636058 LINC00476Q8WZB0 136 aa6.43□□□□□ -1.38
CACNA1A-223ENST00000636058 C14orf144Q96I85 54 aa6.43□□□□□ -1.38
CACNA1A-223ENST00000636058 CDKN2A-AS1Q9UH64 79 aa6.43□□□□□ -1.38
CACNA1A-223ENST00000636058 LYSTQ99698 3801 aa6.43□□□□□ -1.38
CACNA1A-223ENST00000636058 NBDYA0A0U1RRE5 68 aa6.42□□□□□ -1.38
CACNA1A-223ENST00000636058 hDV102S1A0JD36 115 aa6.42□□□□□ -1.38
CACNA1A-223ENST00000636058 TMEM223A0PJW6 202 aa6.42□□□□□ -1.38
CACNA1A-223ENST00000636058 FOXI1Q12951 378 aa6.42□□□□□ -1.38
CACNA1A-223ENST00000636058 TTC32Q5I0X7 151 aa6.42□□□□□ -1.38
CACNA1A-223ENST00000636058 KRTAP26-1Q6PEX3 210 aa6.42□□□□□ -1.38
CACNA1A-223ENST00000636058 STPG4Q8N801 248 aa6.42□□□□□ -1.38
CACNA1A-223ENST00000636058 PAM16Q9Y3D7 125 aa6.42□□□□□ -1.38
CACNA1A-223ENST00000636058 A0A087WZ39 114 aa6.41□□□□□ -1.38
CACNA1A-223ENST00000636058 GAGE12HA6NDE8 117 aa6.41□□□□□ -1.38
CACNA1A-223ENST00000636058 HSBP1L1C9JCN9 74 aa6.41□□□□□ -1.38
CACNA1A-223ENST00000636058 H3BRM9 83 aa6.41□□□□□ -1.38
CACNA1A-223ENST00000636058 SPATA45Q537H7 98 aa6.41□□□□□ -1.38
CACNA1A-223ENST00000636058 MIEN1Q9BRT3 115 aa6.41□□□□□ -1.38
CACNA1A-223ENST00000636058 C1orf43Q9BWL3 253 aa6.41□□□□□ -1.38
CACNA1A-223ENST00000636058 Q9HAA7 133 aa6.41□□□□□ -1.38
CACNA1A-223ENST00000636058 SMIM1B2RUZ4 78 aa6.4□□□□□ -1.38
CACNA1A-223ENST00000636058 E9PLD3 99 aa6.4□□□□□ -1.38
CACNA1A-223ENST00000636058 LY6G6CO95867 125 aa6.4□□□□□ -1.38
CACNA1A-223ENST00000636058 ANKRD39Q53RE8 183 aa6.4□□□□□ -1.38
CACNA1A-223ENST00000636058 C5orf38Q86SI9 138 aa6.4□□□□□ -1.38
CACNA1A-223ENST00000636058 LINC01561Q8N1V8 128 aa6.4□□□□□ -1.38
CACNA1A-223ENST00000636058 IGKV2D-24A0A075B6R9 120 aa6.39□□□□□ -1.39
CACNA1A-223ENST00000636058 IGHV1-58A0A0C4DH39 117 aa6.39□□□□□ -1.39
CACNA1A-223ENST00000636058 IGLV5-39A0A0G2JS06 123 aa6.39□□□□□ -1.39
CACNA1A-223ENST00000636058 COX7A2LO14548 114 aa6.39□□□□□ -1.39
CACNA1A-223ENST00000636058 SPINK8P0C7L1 97 aa6.39□□□□□ -1.39
CACNA1A-223ENST00000636058 HERVK_113P61574 105 aa6.39□□□□□ -1.39
CACNA1A-223ENST00000636058 Q6ZR54 194 aa6.39□□□□□ -1.39
CACNA1A-223ENST00000636058 RMI2Q96E14 147 aa6.39□□□□□ -1.39
CACNA1A-223ENST00000636058 ALMS1Q8TCU4 4167 aa6.39□□□□□ -1.39
CACNA1A-223ENST00000636058 IGKV2D-26A0A0A0MRZ7 120 aa6.38□□□□□ -1.39
CACNA1A-223ENST00000636058 M0R143 59 aa6.38□□□□□ -1.39
CACNA1A-223ENST00000636058 UQCR10Q9UDW1 63 aa6.38□□□□□ -1.39
CACNA1A-223ENST00000636058 COX11Q9Y6N1 276 aa6.38□□□□□ -1.39
CACNA1A-223ENST00000636058 IGHV3-64A0A075B6Q5 118 aa6.37□□□□□ -1.39
CACNA1A-223ENST00000636058 LEPROTO15243 131 aa6.37□□□□□ -1.39
CACNA1A-223ENST00000636058 M0R2N4 97 aa6.36□□□□□ -1.39
CACNA1A-223ENST00000636058 MALP21145 153 aa6.36□□□□□ -1.39
CACNA1A-223ENST00000636058 NMUP48645 174 aa6.36□□□□□ -1.39
CACNA1A-223ENST00000636058 TSPEAR-AS2P59090 65 aa6.36□□□□□ -1.39
CACNA1A-223ENST00000636058 MAPKAPK5-AS1Q8N8E1 139 aa6.36□□□□□ -1.39
CACNA1A-223ENST00000636058 PLEKHB2Q96CS7 222 aa6.36□□□□□ -1.39
CACNA1A-223ENST00000636058 TM2D2Q9BX73 214 aa6.36□□□□□ -1.39
CACNA1A-223ENST00000636058 J3QQQ9 107 aa6.35□□□□□ -1.39
CACNA1A-223ENST00000636058 APOMO95445 188 aa6.35□□□□□ -1.39
CACNA1A-223ENST00000636058 Q6ZRN7 208 aaPredicted RBP6.35□□□□□ -1.39
CACNA1A-223ENST00000636058 COX8AP10176 69 aa6.34□□□□□ -1.39
CACNA1A-223ENST00000636058 LGALS3P17931 250 aaKnown RBP6.34□□□□□ -1.39
CACNA1A-223ENST00000636058 HNRNPA3P51991 378 aaKnown RBP6.34□□□□□ -1.39
CACNA1A-223ENST00000636058 PCP2Q8IVA1 136 aa6.34□□□□□ -1.39
CACNA1A-223ENST00000636058 Q8IZM0 81 aa6.34□□□□□ -1.39
CACNA1A-223ENST00000636058 C15orf56Q8N910 161 aa6.34□□□□□ -1.39
CACNA1A-223ENST00000636058 COX7B2Q8TF08 81 aa6.34□□□□□ -1.39
CACNA1A-223ENST00000636058 ORAOV1Q8WV07 137 aa6.34□□□□□ -1.39
CACNA1A-223ENST00000636058 TTTY13Q9BZ97 58 aa6.34□□□□□ -1.39
CACNA1A-223ENST00000636058 DNAH6Q9C0G6 4158 aa6.33□□□□□ -1.4
CACNA1A-223ENST00000636058 LCE6AA0A183 80 aa6.33□□□□□ -1.4
CACNA1A-223ENST00000636058 KIAA0087Q14695 138 aa6.33□□□□□ -1.4
CACNA1A-223ENST00000636058 BOD1L2Q8IYS8 172 aa6.33□□□□□ -1.4
CACNA1A-223ENST00000636058 C6orf223Q8N319 242 aa6.33□□□□□ -1.4
CACNA1A-223ENST00000636058 SNHG12Q9BXW3 62 aa6.33□□□□□ -1.4
CACNA1A-223ENST00000636058 TOMM7Q9P0U1 55 aa6.33□□□□□ -1.4
CACNA1A-223ENST00000636058 GVQW2A0A096LPI5 108 aaPredicted RBP6.32□□□□□ -1.4
CACNA1A-223ENST00000636058 MYMXA0A1B0GTQ4 84 aa6.32□□□□□ -1.4
CACNA1A-223ENST00000636058 USP17L23D6RBM5 183 aa6.32□□□□□ -1.4
CACNA1A-223ENST00000636058 EREGO14944 169 aa6.32□□□□□ -1.4
CACNA1A-223ENST00000636058 DLEU1O43261 78 aa6.32□□□□□ -1.4
CACNA1A-223ENST00000636058 PSCAO43653 123 aa6.32□□□□□ -1.4
CACNA1A-223ENST00000636058 PRSS2P07478 247 aa6.32□□□□□ -1.4
CACNA1A-223ENST00000636058 SPAG11BQ08648 103 aa6.32□□□□□ -1.4
CACNA1A-223ENST00000636058 CFAP161Q6P656 301 aa6.32□□□□□ -1.4
CACNA1A-223ENST00000636058 SLC25A34Q6PIV7 304 aa6.32□□□□□ -1.4
CACNA1A-223ENST00000636058 ZNF625Q96I27 306 aaPredicted RBP6.32□□□□□ -1.4
CACNA1A-223ENST00000636058 TP73-AS1Q9UF72 201 aa6.32□□□□□ -1.4
CACNA1A-223ENST00000636058 NDUFA12Q9UI09 145 aa6.32□□□□□ -1.4
CACNA1A-223ENST00000636058 HYDINQ4G0P3 5121 aa6.32□□□□□ -1.4
CACNA1A-223ENST00000636058 A0A1B0GV90 55 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms