RNA–Protein interactions for RNA: ENST00000636012.1

CACNA1A-221, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-221ENST00000636012 COA6Q5JTJ3 125 aaKnown RBP11.87□□□□□ -0.51
CACNA1A-221ENST00000636012 ZNF706Q9Y5V0 76 aaPredicted RBP11.87□□□□□ -0.51
CACNA1A-221ENST00000636012 SBSPONQ8IVN8 264 aa11.86□□□□□ -0.51
CACNA1A-221ENST00000636012 IGLV4-3A0A075B6K6 122 aa11.86□□□□□ -0.51
CACNA1A-221ENST00000636012 LINC00643Q86TS7 51 aa11.86□□□□□ -0.51
CACNA1A-221ENST00000636012 FAM19A3Q7Z5A8 133 aa11.86□□□□□ -0.51
CACNA1A-221ENST00000636012 C10orf25Q5T742 122 aa11.85□□□□□ -0.51
CACNA1A-221ENST00000636012 Q6ZSR3 168 aa11.85□□□□□ -0.51
CACNA1A-221ENST00000636012 C6orf99Q4VX62 202 aa11.84□□□□□ -0.51
CACNA1A-221ENST00000636012 IBA57-AS1B1ANH7 110 aa11.84□□□□□ -0.51
CACNA1A-221ENST00000636012 OXLD1Q5BKU9 147 aa11.84□□□□□ -0.51
CACNA1A-221ENST00000636012 UQCRQO14949 82 aa11.84□□□□□ -0.51
CACNA1A-221ENST00000636012 IGLV8-61A0A075B6I0 122 aa11.83□□□□□ -0.52
CACNA1A-221ENST00000636012 SPRY4Q9C004 299 aa11.83□□□□□ -0.52
CACNA1A-221ENST00000636012 SMR3AQ99954 134 aa11.83□□□□□ -0.52
CACNA1A-221ENST00000636012 NUPR2A6NF83 97 aa11.83□□□□□ -0.52
CACNA1A-221ENST00000636012 RNASE8Q8TDE3 154 aaKnown RBP11.82□□□□□ -0.52
CACNA1A-221ENST00000636012 MYO18BQ8IUG5 2567 aa11.82□□□□□ -0.52
CACNA1A-221ENST00000636012 LINC00308Q8TCZ7 52 aa11.82□□□□□ -0.52
CACNA1A-221ENST00000636012 TRBV6-5A0A0K0K1A5 114 aa11.82□□□□□ -0.52
CACNA1A-221ENST00000636012 LOC107984640A0A0U1RRK4 108 aa11.81□□□□□ -0.52
CACNA1A-221ENST00000636012 EBI3Q14213 229 aa11.81□□□□□ -0.52
CACNA1A-221ENST00000636012 LINC00208Q96KT6 92 aa11.81□□□□□ -0.52
CACNA1A-221ENST00000636012 TRBV6-4A0A1B0GX49 114 aa11.81□□□□□ -0.52
CACNA1A-221ENST00000636012 M0QY20 66 aa11.81□□□□□ -0.52
CACNA1A-221ENST00000636012 LRRK2Q5S007 2527 aa11.81□□□□□ -0.52
CACNA1A-221ENST00000636012 IGLV4-69A0A075B6H9 119 aa11.81□□□□□ -0.52
CACNA1A-221ENST00000636012 A8MZ25 164 aa11.8□□□□□ -0.52
CACNA1A-221ENST00000636012 ZNF73O43830 326 aaPredicted RBP11.8□□□□□ -0.52
CACNA1A-221ENST00000636012 ZNF702PQ9H963 129 aa11.8□□□□□ -0.52
CACNA1A-221ENST00000636012 Q9UF83 564 aa11.8□□□□□ -0.52
CACNA1A-221ENST00000636012 LINC01006Q8NI28 216 aa11.79□□□□□ -0.52
CACNA1A-221ENST00000636012 TTC28Q96AY4 2481 aa11.79□□□□□ -0.52
CACNA1A-221ENST00000636012 RBX1P62877 108 aa11.78□□□□□ -0.52
CACNA1A-221ENST00000636012 Q6ZQY7 126 aa11.78□□□□□ -0.52
CACNA1A-221ENST00000636012 CACNA1AO00555 2505 aa11.78□□□□□ -0.52
CACNA1A-221ENST00000636012 LELP1Q5T871 98 aa11.78□□□□□ -0.52
CACNA1A-221ENST00000636012 TRIAP1O43715 76 aa11.78□□□□□ -0.52
CACNA1A-221ENST00000636012 C7orf65Q6ZTY9 151 aa11.78□□□□□ -0.52
CACNA1A-221ENST00000636012 PSMG3-AS1Q96PY0 264 aa11.77□□□□□ -0.52
CACNA1A-221ENST00000636012 CD164L2Q6UWJ8 174 aa11.77□□□□□ -0.52
CACNA1A-221ENST00000636012 C1orf229Q6ZS94 237 aaPredicted RBP11.77□□□□□ -0.52
CACNA1A-221ENST00000636012 PIEZO2Q9H5I5 2752 aa11.77□□□□□ -0.52
CACNA1A-221ENST00000636012 ZNF22P17026 224 aaPredicted RBP11.77□□□□□ -0.53
CACNA1A-221ENST00000636012 CRIP1P50238 77 aa11.77□□□□□ -0.53
CACNA1A-221ENST00000636012 DHRS4-AS1Q9P1J3 65 aa11.77□□□□□ -0.53
CACNA1A-221ENST00000636012 LINC00337Q8N6G1 96 aa11.77□□□□□ -0.53
CACNA1A-221ENST00000636012 IGKV2D-30A0A075B6S6 120 aa11.77□□□□□ -0.53
CACNA1A-221ENST00000636012 IGKV2-30P06310 120 aa11.77□□□□□ -0.53
CACNA1A-221ENST00000636012 Q6ZS46 218 aa11.77□□□□□ -0.53
CACNA1A-221ENST00000636012 M0R378 163 aa11.76□□□□□ -0.53
CACNA1A-221ENST00000636012 LINC00474Q9P2X8 69 aa11.76□□□□□ -0.53
CACNA1A-221ENST00000636012 LINC01547P58512 204 aaPredicted RBP11.76□□□□□ -0.53
CACNA1A-221ENST00000636012 A0A1B0GXF2 115 aa11.75□□□□□ -0.53
CACNA1A-221ENST00000636012 FSHBP01225 129 aa11.75□□□□□ -0.53
CACNA1A-221ENST00000636012 C11orf71Q6IPW1 123 aa11.75□□□□□ -0.53
CACNA1A-221ENST00000636012 IGLV5-52A0A0A0MRZ9 124 aa11.75□□□□□ -0.53
CACNA1A-221ENST00000636012 RNASE3P12724 160 aaKnown RBP11.75□□□□□ -0.53
CACNA1A-221ENST00000636012 LINC00694P0DN24 101 aa11.74□□□□□ -0.53
CACNA1A-221ENST00000636012 LINC01556Q5JQF7 62 aa11.73□□□□□ -0.53
CACNA1A-221ENST00000636012 ZFYVE26Q68DK2 2539 aa11.73□□□□□ -0.53
CACNA1A-221ENST00000636012 LINC00959A0A1B0GUT2 108 aa11.73□□□□□ -0.53
CACNA1A-221ENST00000636012 SMIM11BQ8TCY0 68 aa11.73□□□□□ -0.53
CACNA1A-221ENST00000636012 MAPKAPK5-AS1Q8N8E1 139 aa11.73□□□□□ -0.53
CACNA1A-221ENST00000636012 NDUFC1O43677 76 aa11.71□□□□□ -0.53
CACNA1A-221ENST00000636012 SPAG11AQ6PDA7 123 aa11.71□□□□□ -0.54
CACNA1A-221ENST00000636012 LINC00574Q9H8X3 128 aa11.71□□□□□ -0.54
CACNA1A-221ENST00000636012 MYO9AB2RTY4 2548 aa11.71□□□□□ -0.54
CACNA1A-221ENST00000636012 M0QXV9 152 aa11.7□□□□□ -0.54
CACNA1A-221ENST00000636012 RNF185Q96GF1 192 aa11.7□□□□□ -0.54
CACNA1A-221ENST00000636012 ATP5EP56381 51 aaPredicted RBP11.69□□□□□ -0.54
CACNA1A-221ENST00000636012 TSHBP01222 138 aa11.69□□□□□ -0.54
CACNA1A-221ENST00000636012 CCDC179H3BU77 68 aa11.69□□□□□ -0.54
CACNA1A-221ENST00000636012 C2CD3Q4AC94 2353 aa11.69□□□□□ -0.54
CACNA1A-221ENST00000636012 BRI3O95415 125 aa11.69□□□□□ -0.54
CACNA1A-221ENST00000636012 TP73-AS1Q9UF72 201 aa11.68□□□□□ -0.54
CACNA1A-221ENST00000636012 COL27A1Q8IZC6 1860 aaPredicted RBP11.68□□□□□ -0.54
CACNA1A-221ENST00000636012 COX17Q14061 63 aa11.68□□□□□ -0.54
CACNA1A-221ENST00000636012 C1orf137Q5JT78 98 aa11.68□□□□□ -0.54
CACNA1A-221ENST00000636012 ATP5EP2Q5VTU8 51 aa11.68□□□□□ -0.54
CACNA1A-221ENST00000636012 BRWD1-AS2P59051 145 aa11.67□□□□□ -0.54
CACNA1A-221ENST00000636012 ACYP2P14621 99 aa11.67□□□□□ -0.54
CACNA1A-221ENST00000636012 TRBV30A0A0K0K1B3 111 aa11.66□□□□□ -0.54
CACNA1A-221ENST00000636012 NDUFA7O95182 113 aa11.66□□□□□ -0.54
CACNA1A-221ENST00000636012 RPL28P46779 137 aaKnown RBP11.66□□□□□ -0.54
CACNA1A-221ENST00000636012 MBD6Q96DN6 1003 aa11.66□□□□□ -0.54
CACNA1A-221ENST00000636012 P0C879 139 aa11.66□□□□□ -0.54
CACNA1A-221ENST00000636012 C11orf1Q9H5F2 150 aa11.66□□□□□ -0.54
CACNA1A-221ENST00000636012 ACANP16112 2415 aa11.65□□□□□ -0.54
CACNA1A-221ENST00000636012 CYSRT1A8MQ03 144 aa11.65□□□□□ -0.54
CACNA1A-221ENST00000636012 H0Y9P7 68 aa11.65□□□□□ -0.55
CACNA1A-221ENST00000636012 MRGPRG-AS1Q2M3A8 158 aa11.64□□□□□ -0.55
CACNA1A-221ENST00000636012 REG3GQ6UW15 175 aa11.64□□□□□ -0.55
CACNA1A-221ENST00000636012 LST1O00453 97 aa11.64□□□□□ -0.55
CACNA1A-221ENST00000636012 MRPS12O15235 138 aaKnown RBP11.64□□□□□ -0.55
CACNA1A-221ENST00000636012 C9orf116Q5BN46 136 aaPredicted RBP11.64□□□□□ -0.55
CACNA1A-221ENST00000636012 NRACQ8N912 160 aa11.63□□□□□ -0.55
CACNA1A-221ENST00000636012 C6orf223Q8N319 242 aa11.63□□□□□ -0.55
CACNA1A-221ENST00000636012 PRR9Q5T870 116 aa11.63□□□□□ -0.55
CACNA1A-221ENST00000636012 Q6ZPA2 131 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms