RNA–Protein interactions for RNA: ENST00000635915.1

CLN5-206, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 5

Gene CLN5, Length 2,517 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-206ENST00000635915 IGHV3-30P01768 117 aa12.48□□□□□ -0.41
CLN5-206ENST00000635915 IGHV3-30-5P0DP03 117 aa12.48□□□□□ -0.41
CLN5-206ENST00000635915 SPANXB1Q9NS25 103 aaPredicted RBP12.47□□□□□ -0.41
CLN5-206ENST00000635915 A0A1W2PPM0 123 aa12.46□□□□□ -0.41
CLN5-206ENST00000635915 TMEM262E9PQX1 116 aa12.46□□□□□ -0.41
CLN5-206ENST00000635915 FAM19A3Q7Z5A8 133 aa12.46□□□□□ -0.41
CLN5-206ENST00000635915 SMIM1B2RUZ4 78 aa12.46□□□□□ -0.42
CLN5-206ENST00000635915 SAMD5Q5TGI4 173 aa12.46□□□□□ -0.42
CLN5-206ENST00000635915 PRB2P02812 416 aaPredicted RBP12.45□□□□□ -0.42
CLN5-206ENST00000635915 SPCS1Q9Y6A9 102 aa12.45□□□□□ -0.42
CLN5-206ENST00000635915 ZFAND6Q6FIF0 208 aa12.44□□□□□ -0.42
CLN5-206ENST00000635915 IGLV5-39A0A0G2JS06 123 aa12.44□□□□□ -0.42
CLN5-206ENST00000635915 A0A1B0GWB2 263 aa12.44□□□□□ -0.42
CLN5-206ENST00000635915 K7EP34 96 aa12.44□□□□□ -0.42
CLN5-206ENST00000635915 APOMO95445 188 aa12.44□□□□□ -0.42
CLN5-206ENST00000635915 RNF151Q2KHN1 245 aa12.44□□□□□ -0.42
CLN5-206ENST00000635915 GTF2H5Q6ZYL4 71 aa12.44□□□□□ -0.42
CLN5-206ENST00000635915 Q8N3U1 123 aa12.44□□□□□ -0.42
CLN5-206ENST00000635915 ADAMTSL4-AS1Q5T5F5 129 aa12.43□□□□□ -0.42
CLN5-206ENST00000635915 LITAFQ99732 161 aa12.43□□□□□ -0.42
CLN5-206ENST00000635915 IGLL5B9A064 214 aa12.43□□□□□ -0.42
CLN5-206ENST00000635915 RBX1P62877 108 aa12.43□□□□□ -0.42
CLN5-206ENST00000635915 CLPSL2Q6UWE3 100 aa12.43□□□□□ -0.42
CLN5-206ENST00000635915 FABP2P12104 132 aa12.42□□□□□ -0.42
CLN5-206ENST00000635915 ZNF625Q96I27 306 aaPredicted RBP12.42□□□□□ -0.42
CLN5-206ENST00000635915 TMEM238LA0A1B0GVL6 79 aa12.41□□□□□ -0.42
CLN5-206ENST00000635915 A6NJY4 79 aa12.41□□□□□ -0.42
CLN5-206ENST00000635915 TMEM238C9JI98 176 aa12.41□□□□□ -0.42
CLN5-206ENST00000635915 MUSTN1Q8IVN3 82 aa12.41□□□□□ -0.42
CLN5-206ENST00000635915 Q9H8V8 135 aa12.4□□□□□ -0.42
CLN5-206ENST00000635915 PRSS2P07478 247 aa12.4□□□□□ -0.42
CLN5-206ENST00000635915 NPC2P61916 151 aa12.4□□□□□ -0.42
CLN5-206ENST00000635915 DAND5Q8N907 189 aa12.4□□□□□ -0.42
CLN5-206ENST00000635915 A4D1N5 150 aa12.39□□□□□ -0.43
CLN5-206ENST00000635915 CFC1BP0CG36 223 aa12.39□□□□□ -0.43
CLN5-206ENST00000635915 CFC1P0CG37 223 aa12.39□□□□□ -0.43
CLN5-206ENST00000635915 PGPEP1Q9NXJ5 209 aa12.39□□□□□ -0.43
CLN5-206ENST00000635915 NDUFA1O15239 70 aa12.39□□□□□ -0.43
CLN5-206ENST00000635915 SFTA2Q6UW10 78 aa12.39□□□□□ -0.43
CLN5-206ENST00000635915 LINC00959A0A1B0GUT2 108 aa12.38□□□□□ -0.43
CLN5-206ENST00000635915 OCIAD2Q56VL3 154 aa12.38□□□□□ -0.43
CLN5-206ENST00000635915 EIF4EBP3O60516 100 aaPredicted RBP12.38□□□□□ -0.43
CLN5-206ENST00000635915 A0A0U1RRA0 63 aa12.37□□□□□ -0.43
CLN5-206ENST00000635915 A0A1B0GUV1 79 aa12.37□□□□□ -0.43
CLN5-206ENST00000635915 MRPL23Q16540 153 aaKnown RBP12.37□□□□□ -0.43
CLN5-206ENST00000635915 C5orf38Q86SI9 138 aa12.37□□□□□ -0.43
CLN5-206ENST00000635915 IGHV3OR16-9A0A0B4J2B5 98 aa12.37□□□□□ -0.43
CLN5-206ENST00000635915 Q6ZTC4 211 aa12.37□□□□□ -0.43
CLN5-206ENST00000635915 ICOSQ9Y6W8 199 aa12.36□□□□□ -0.43
CLN5-206ENST00000635915 XCL1P47992 114 aa12.36□□□□□ -0.43
CLN5-206ENST00000635915 A0A0J9YWU9 116 aa12.35□□□□□ -0.43
CLN5-206ENST00000635915 TOMM7Q9P0U1 55 aa12.35□□□□□ -0.43
CLN5-206ENST00000635915 TSPAN13O95857 204 aa12.35□□□□□ -0.43
CLN5-206ENST00000635915 LINC00269Q8N2A0 174 aa12.35□□□□□ -0.43
CLN5-206ENST00000635915 RPL24P83731 157 aaKnown RBP12.34□□□□□ -0.43
CLN5-206ENST00000635915 MIAQ16674 131 aa12.34□□□□□ -0.43
CLN5-206ENST00000635915 TEX48A0A1B0GUV7 120 aa12.33□□□□□ -0.44
CLN5-206ENST00000635915 SPANXDQ9BXN6 97 aa12.33□□□□□ -0.44
CLN5-206ENST00000635915 SPANXCQ9NY87 97 aa12.33□□□□□ -0.44
CLN5-206ENST00000635915 CBY1Q9Y3M2 126 aa12.33□□□□□ -0.44
CLN5-206ENST00000635915 ANGP03950 147 aaKnown RBP12.33□□□□□ -0.44
CLN5-206ENST00000635915 MTURNQ8N3F0 131 aa12.32□□□□□ -0.44
CLN5-206ENST00000635915 NANOS2P60321 138 aaKnown RBP12.32□□□□□ -0.44
CLN5-206ENST00000635915 IGLV10-54A0A075B6I4 117 aa12.31□□□□□ -0.44
CLN5-206ENST00000635915 A0A087WZ39 114 aa12.31□□□□□ -0.44
CLN5-206ENST00000635915 COX7B2Q8TF08 81 aa12.31□□□□□ -0.44
CLN5-206ENST00000635915 C11orf68Q9H3H3 251 aaKnown RBP12.31□□□□□ -0.44
CLN5-206ENST00000635915 PRO1854Q9UHT4 67 aa12.31□□□□□ -0.44
CLN5-206ENST00000635915 H3BMG7 143 aa12.3□□□□□ -0.44
CLN5-206ENST00000635915 H7C2G1 150 aa12.3□□□□□ -0.44
CLN5-206ENST00000635915 SS18Q15532 418 aa12.3□□□□□ -0.44
CLN5-206ENST00000635915 MRAPQ8TCY5 172 aa12.3□□□□□ -0.44
CLN5-206ENST00000635915 TIMM17BO60830 172 aa12.3□□□□□ -0.44
CLN5-206ENST00000635915 KPRPQ5T749 579 aaPredicted RBP12.3□□□□□ -0.44
CLN5-206ENST00000635915 LELP1Q5T871 98 aa12.3□□□□□ -0.44
CLN5-206ENST00000635915 MDFIQ99750 246 aa12.3□□□□□ -0.44
CLN5-206ENST00000635915 VPS25Q9BRG1 176 aa12.3□□□□□ -0.44
CLN5-206ENST00000635915 LOC107984156A0A0G2JMH3 177 aa12.29□□□□□ -0.44
CLN5-206ENST00000635915 MEIG1Q5JSS6 88 aa12.29□□□□□ -0.44
CLN5-206ENST00000635915 ARL17AQ8IVW1 177 aa12.29□□□□□ -0.44
CLN5-206ENST00000635915 K7EIL1 84 aa12.29□□□□□ -0.44
CLN5-206ENST00000635915 LYPD5Q6UWN5 251 aa12.29□□□□□ -0.44
CLN5-206ENST00000635915 REG3AQ06141 175 aa12.28□□□□□ -0.44
CLN5-206ENST00000635915 CIRBPQ14011 172 aaKnown RBP12.28□□□□□ -0.44
CLN5-206ENST00000635915 DEFB121Q5J5C9 76 aa12.28□□□□□ -0.44
CLN5-206ENST00000635915 C21orf62-AS1Q17RA5 79 aa12.27□□□□□ -0.45
CLN5-206ENST00000635915 SH2D6Q7Z4S9 175 aa12.27□□□□□ -0.45
CLN5-206ENST00000635915 A0A0B4J2C4 111 aa12.26□□□□□ -0.45
CLN5-206ENST00000635915 K7ERU9 68 aa12.26□□□□□ -0.45
CLN5-206ENST00000635915 IGHV3-33P01772 117 aa12.26□□□□□ -0.45
CLN5-206ENST00000635915 C11orf45Q8TAV5 145 aa12.26□□□□□ -0.45
CLN5-206ENST00000635915 WFDC2Q14508 124 aa12.26□□□□□ -0.45
CLN5-206ENST00000635915 SOSTDC1Q6X4U4 206 aa12.26□□□□□ -0.45
CLN5-206ENST00000635915 LINC00308Q8TCZ7 52 aa12.26□□□□□ -0.45
CLN5-206ENST00000635915 CHCHD10Q8WYQ3 142 aaPredicted RBP12.26□□□□□ -0.45
CLN5-206ENST00000635915 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.25□□□□□ -0.45
CLN5-206ENST00000635915 HERV-K104P63124 156 aa12.25□□□□□ -0.45
CLN5-206ENST00000635915 COL7A1Q02388 2944 aa12.24□□□□□ -0.45
CLN5-206ENST00000635915 KLK12Q9UKR0 248 aa12.24□□□□□ -0.45
CLN5-206ENST00000635915 DEFB131BA0A096LNP1 70 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms