RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 HSBP1O75506 76 aa5.59□□□□□ -1.51
CDKL5-209ENST00000635828 AMELXQ99217 191 aa5.59□□□□□ -1.51
CDKL5-209ENST00000635828 ERASQ7Z444 233 aa5.59□□□□□ -1.52
CDKL5-209ENST00000635828 C15orf56Q8N910 161 aa5.59□□□□□ -1.52
CDKL5-209ENST00000635828 SPANXA1Q9NS26 97 aa5.59□□□□□ -1.52
CDKL5-209ENST00000635828 PYGO1Q9Y3Y4 419 aa5.59□□□□□ -1.52
CDKL5-209ENST00000635828 USP17L23D6RBM5 183 aa5.58□□□□□ -1.52
CDKL5-209ENST00000635828 BIRC6Q9NR09 4857 aa5.58□□□□□ -1.52
CDKL5-209ENST00000635828 UBE2D1P51668 147 aa5.58□□□□□ -1.52
CDKL5-209ENST00000635828 TIMM21Q9BVV7 248 aa5.58□□□□□ -1.52
CDKL5-209ENST00000635828 TEX43Q6ZNM6 134 aa5.58□□□□□ -1.52
CDKL5-209ENST00000635828 TMEM18Q96B42 140 aa5.58□□□□□ -1.52
CDKL5-209ENST00000635828 VCX2Q9H322 139 aa5.58□□□□□ -1.52
CDKL5-209ENST00000635828 PRSS1P07477 247 aa5.57□□□□□ -1.52
CDKL5-209ENST00000635828 MRPS36P82909 103 aaKnown RBP5.57□□□□□ -1.52
CDKL5-209ENST00000635828 CHCHD1Q96BP2 118 aaKnown RBP5.57□□□□□ -1.52
CDKL5-209ENST00000635828 C1orf196B1AJZ1 125 aa5.57□□□□□ -1.52
CDKL5-209ENST00000635828 K7EMI3 77 aa5.57□□□□□ -1.52
CDKL5-209ENST00000635828 RAB5BP61020 215 aa5.57□□□□□ -1.52
CDKL5-209ENST00000635828 C12orf57Q99622 126 aa5.57□□□□□ -1.52
CDKL5-209ENST00000635828 CST9LQ9H4G1 147 aa5.57□□□□□ -1.52
CDKL5-209ENST00000635828 Q8N814 137 aa5.57□□□□□ -1.52
CDKL5-209ENST00000635828 TIMM17AQ99595 171 aa5.57□□□□□ -1.52
CDKL5-209ENST00000635828 IGLV4-69A0A075B6H9 119 aa5.56□□□□□ -1.52
CDKL5-209ENST00000635828 IGHV3OR16-9A0A0B4J2B5 98 aa5.56□□□□□ -1.52
CDKL5-209ENST00000635828 K7EP13 123 aa5.56□□□□□ -1.52
CDKL5-209ENST00000635828 CDKN2A-AS1Q9UH64 79 aa5.56□□□□□ -1.52
CDKL5-209ENST00000635828 RYR1P21817 5038 aa5.56□□□□□ -1.52
CDKL5-209ENST00000635828 IGHV3-64A0A075B6Q5 118 aa5.56□□□□□ -1.52
CDKL5-209ENST00000635828 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.56□□□□□ -1.52
CDKL5-209ENST00000635828 KRTAP17-1Q9BYP8 105 aa5.56□□□□□ -1.52
CDKL5-209ENST00000635828 SS18Q15532 418 aa5.55□□□□□ -1.52
CDKL5-209ENST00000635828 LEPROTL1O95214 131 aa5.55□□□□□ -1.52
CDKL5-209ENST00000635828 NFE4Q86UQ8 179 aa5.55□□□□□ -1.52
CDKL5-209ENST00000635828 IFI27L1Q96BM0 104 aa5.55□□□□□ -1.52
CDKL5-209ENST00000635828 TRAV8-4A0A0B4J246 113 aa5.55□□□□□ -1.52
CDKL5-209ENST00000635828 PKIAP61925 76 aa5.55□□□□□ -1.52
CDKL5-209ENST00000635828 SNRPEP62304 92 aaKnown RBP5.55□□□□□ -1.52
CDKL5-209ENST00000635828 CD164L2Q6UWJ8 174 aa5.55□□□□□ -1.52
CDKL5-209ENST00000635828 VPS13BQ7Z7G8 4022 aa5.54□□□□□ -1.52
CDKL5-209ENST00000635828 hDV102S1A0JD36 115 aa5.54□□□□□ -1.52
CDKL5-209ENST00000635828 Q6ZN92 141 aa5.54□□□□□ -1.52
CDKL5-209ENST00000635828 MRPL35Q9NZE8 188 aaKnown RBP5.54□□□□□ -1.52
CDKL5-209ENST00000635828 C11orf86A6NJI1 115 aa5.54□□□□□ -1.52
CDKL5-209ENST00000635828 PANO1I0J062 215 aa5.54□□□□□ -1.52
CDKL5-209ENST00000635828 PMVKQ15126 192 aa5.54□□□□□ -1.52
CDKL5-209ENST00000635828 C2orf82Q6UX34 121 aa5.54□□□□□ -1.52
CDKL5-209ENST00000635828 SPINK8P0C7L1 97 aa5.53□□□□□ -1.52
CDKL5-209ENST00000635828 C10orf25Q5T742 122 aa5.53□□□□□ -1.52
CDKL5-209ENST00000635828 TM2D2Q9BX73 214 aa5.53□□□□□ -1.52
CDKL5-209ENST00000635828 FAM30AQ9NZY2 134 aa5.53□□□□□ -1.52
CDKL5-209ENST00000635828 KRTAP10-1P60331 282 aa5.53□□□□□ -1.52
CDKL5-209ENST00000635828 COA6Q5JTJ3 125 aaKnown RBP5.53□□□□□ -1.52
CDKL5-209ENST00000635828 COX7A2LO14548 114 aa5.52□□□□□ -1.53
CDKL5-209ENST00000635828 RNF151Q2KHN1 245 aa5.52□□□□□ -1.53
CDKL5-209ENST00000635828 LINC00336Q6ZUF6 198 aa5.52□□□□□ -1.53
CDKL5-209ENST00000635828 HIST3H2BBQ8N257 126 aa5.52□□□□□ -1.53
CDKL5-209ENST00000635828 C2orf88Q9BSF0 95 aa5.52□□□□□ -1.53
CDKL5-209ENST00000635828 LOC105371267A0A1B0GV96 52 aa5.52□□□□□ -1.53
CDKL5-209ENST00000635828 MALP21145 153 aa5.52□□□□□ -1.53
CDKL5-209ENST00000635828 CHAC1Q9BUX1 264 aa5.52□□□□□ -1.53
CDKL5-209ENST00000635828 C9orf116Q5BN46 136 aaPredicted RBP5.52□□□□□ -1.53
CDKL5-209ENST00000635828 ZNF22P17026 224 aaPredicted RBP5.51□□□□□ -1.53
CDKL5-209ENST00000635828 RMI2Q96E14 147 aa5.51□□□□□ -1.53
CDKL5-209ENST00000635828 TOMM7Q9P0U1 55 aa5.51□□□□□ -1.53
CDKL5-209ENST00000635828 IGLV5-52A0A0A0MRZ9 124 aa5.51□□□□□ -1.53
CDKL5-209ENST00000635828 C3orf79P0CE67 100 aa5.51□□□□□ -1.53
CDKL5-209ENST00000635828 ATOH7Q8N100 152 aa5.51□□□□□ -1.53
CDKL5-209ENST00000635828 HIST1H2BLQ99880 126 aa5.51□□□□□ -1.53
CDKL5-209ENST00000635828 SRRM2Q9UQ35 2752 aaKnown RBP5.51□□□□□ -1.53
CDKL5-209ENST00000635828 A0A087WZ39 114 aa5.51□□□□□ -1.53
CDKL5-209ENST00000635828 CHTF8P0CG12 524 aa5.51□□□□□ -1.53
CDKL5-209ENST00000635828 ORAOV1Q8WV07 137 aa5.51□□□□□ -1.53
CDKL5-209ENST00000635828 CHTOPQ9Y3Y2 248 aaKnown RBP5.51□□□□□ -1.53
CDKL5-209ENST00000635828 C16orf90A8MZG2 172 aa5.5□□□□□ -1.53
CDKL5-209ENST00000635828 SMIM1B2RUZ4 78 aa5.5□□□□□ -1.53
CDKL5-209ENST00000635828 ATP5LO75964 103 aa5.5□□□□□ -1.53
CDKL5-209ENST00000635828 S100A12P80511 92 aa5.5□□□□□ -1.53
CDKL5-209ENST00000635828 KIAA0087Q14695 138 aa5.5□□□□□ -1.53
CDKL5-209ENST00000635828 Q6ZRU5 148 aa5.5□□□□□ -1.53
CDKL5-209ENST00000635828 COX11Q9Y6N1 276 aa5.5□□□□□ -1.53
CDKL5-209ENST00000635828 KRTDAPP60985 99 aa5.5□□□□□ -1.53
CDKL5-209ENST00000635828 UNQ6190/PRO20217Q6UXQ8 127 aa5.5□□□□□ -1.53
CDKL5-209ENST00000635828 GEMIN7Q9H840 131 aaKnown RBP5.5□□□□□ -1.53
CDKL5-209ENST00000635828 TINCRA0A1B0GVN0 87 aa5.5□□□□□ -1.53
CDKL5-209ENST00000635828 C5orf52A6NGY3 159 aa5.5□□□□□ -1.53
CDKL5-209ENST00000635828 TMEM170BQ5T4T1 132 aa5.5□□□□□ -1.53
CDKL5-209ENST00000635828 FAM19A3Q7Z5A8 133 aa5.5□□□□□ -1.53
CDKL5-209ENST00000635828 IGLC3P0DOY3 106 aa5.49□□□□□ -1.53
CDKL5-209ENST00000635828 GVQW2A0A096LPI5 108 aaPredicted RBP5.49□□□□□ -1.53
CDKL5-209ENST00000635828 SYS1-DBNDD2H3BUS1 97 aa5.49□□□□□ -1.53
CDKL5-209ENST00000635828 SPAG11BQ08648 103 aa5.49□□□□□ -1.53
CDKL5-209ENST00000635828 SMAGPQ0VAQ4 97 aa5.49□□□□□ -1.53
CDKL5-209ENST00000635828 PCLOQ9Y6V0 5065 aa5.48□□□□□ -1.53
CDKL5-209ENST00000635828 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.48□□□□□ -1.53
CDKL5-209ENST00000635828 ABCA13Q86UQ4 5058 aa5.48□□□□□ -1.53
CDKL5-209ENST00000635828 IGLV5-45A0A087WSX0 123 aa5.48□□□□□ -1.53
CDKL5-209ENST00000635828 F8VRH5 84 aa5.48□□□□□ -1.53
CDKL5-209ENST00000635828 TSPEAR-AS2P59090 65 aa5.48□□□□□ -1.53
CDKL5-209ENST00000635828 HERVK_113P63121 156 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms