RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 GVQW2A0A096LPI5 108 aaPredicted RBP10.07□□□□□ -0.8
CLN6-211ENST00000635754 LINC00173Q6ZV60 143 aa10.07□□□□□ -0.8
CLN6-211ENST00000635754 AMELXQ99217 191 aa10.07□□□□□ -0.8
CLN6-211ENST00000635754 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.07□□□□□ -0.8
CLN6-211ENST00000635754 CNBPP62633 177 aaKnown RBP10.07□□□□□ -0.8
CLN6-211ENST00000635754 LINC01620Q4KN68 170 aa10.07□□□□□ -0.8
CLN6-211ENST00000635754 APOMO95445 188 aa10.06□□□□□ -0.8
CLN6-211ENST00000635754 HBDP02042 147 aa10.06□□□□□ -0.8
CLN6-211ENST00000635754 UBE2D1P51668 147 aa10.06□□□□□ -0.8
CLN6-211ENST00000635754 ZC2HC1BQ5TFG8 222 aa10.06□□□□□ -0.8
CLN6-211ENST00000635754 C5orf38Q86SI9 138 aa10.06□□□□□ -0.8
CLN6-211ENST00000635754 IGHV3OR16-9A0A0B4J2B5 98 aa10.05□□□□□ -0.8
CLN6-211ENST00000635754 LINC00242Q5T6M2 205 aa10.05□□□□□ -0.8
CLN6-211ENST00000635754 CHCHD1Q96BP2 118 aaKnown RBP10.05□□□□□ -0.8
CLN6-211ENST00000635754 DYNC1H1Q14204 4646 aaKnown RBP10.05□□□□□ -0.8
CLN6-211ENST00000635754 A0A096LNJ9 63 aa10.04□□□□□ -0.8
CLN6-211ENST00000635754 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.04□□□□□ -0.8
CLN6-211ENST00000635754 ZNF561-AS1K7EIQ3 104 aa10.04□□□□□ -0.8
CLN6-211ENST00000635754 PMCHL1Q16048 86 aa10.04□□□□□ -0.8
CLN6-211ENST00000635754 BAGE3Q86Y29 109 aa10.04□□□□□ -0.8
CLN6-211ENST00000635754 C9orf163Q8N9P6 203 aa10.04□□□□□ -0.8
CLN6-211ENST00000635754 DNAH5Q8TE73 4624 aa10.03□□□□□ -0.8
CLN6-211ENST00000635754 SLPIP03973 132 aa10.02□□□□□ -0.81
CLN6-211ENST00000635754 SEC11AP67812 179 aa10.02□□□□□ -0.81
CLN6-211ENST00000635754 S100A1P23297 94 aa10.01□□□□□ -0.81
CLN6-211ENST00000635754 COX6A2Q02221 97 aa10.01□□□□□ -0.81
CLN6-211ENST00000635754 FAM19A3Q7Z5A8 133 aa10.01□□□□□ -0.81
CLN6-211ENST00000635754 OR10D4PQ8NGN7 298 aa10.01□□□□□ -0.81
CLN6-211ENST00000635754 LINC00526Q96FQ7 95 aa10.01□□□□□ -0.81
CLN6-211ENST00000635754 LRP1BQ9NZR2 4599 aa10□□□□□ -0.81
CLN6-211ENST00000635754 A0A087WZ39 114 aa10□□□□□ -0.81
CLN6-211ENST00000635754 HSBP1O75506 76 aa10□□□□□ -0.81
CLN6-211ENST00000635754 ATP5LO75964 103 aa10□□□□□ -0.81
CLN6-211ENST00000635754 HERVK_113P63121 156 aa10□□□□□ -0.81
CLN6-211ENST00000635754 PMVKQ15126 192 aa10□□□□□ -0.81
CLN6-211ENST00000635754 PDZD11Q5EBL8 140 aa10□□□□□ -0.81
CLN6-211ENST00000635754 GEMIN7Q9H840 131 aaKnown RBP10□□□□□ -0.81
CLN6-211ENST00000635754 IGLV4-69A0A075B6H9 119 aa9.99□□□□□ -0.81
CLN6-211ENST00000635754 IGHV3-64A0A075B6Q5 118 aa9.99□□□□□ -0.81
CLN6-211ENST00000635754 ATP6V1G1O75348 118 aa9.99□□□□□ -0.81
CLN6-211ENST00000635754 SPAG11BQ08648 103 aa9.99□□□□□ -0.81
CLN6-211ENST00000635754 Q6ZSA8 131 aa9.99□□□□□ -0.81
CLN6-211ENST00000635754 ORAOV1Q8WV07 137 aa9.99□□□□□ -0.81
CLN6-211ENST00000635754 CST9LQ9H4G1 147 aa9.99□□□□□ -0.81
CLN6-211ENST00000635754 FAM30AQ9NZY2 134 aa9.99□□□□□ -0.81
CLN6-211ENST00000635754 KIAA1109Q2LD37 5005 aa9.99□□□□□ -0.81
CLN6-211ENST00000635754 XGP55808 180 aa9.99□□□□□ -0.81
CLN6-211ENST00000635754 CARD19Q96LW7 228 aa9.99□□□□□ -0.81
CLN6-211ENST00000635754 KRTAP17-1Q9BYP8 105 aa9.99□□□□□ -0.81
CLN6-211ENST00000635754 A0A0J9YXV3 536 aa9.98□□□□□ -0.81
CLN6-211ENST00000635754 NDUFA6P56556 154 aa9.98□□□□□ -0.81
CLN6-211ENST00000635754 SYCNQ0VAF6 134 aa9.98□□□□□ -0.81
CLN6-211ENST00000635754 LINC01561Q8N1V8 128 aa9.98□□□□□ -0.81
CLN6-211ENST00000635754 CAMK2N2Q96S95 79 aa9.98□□□□□ -0.81
CLN6-211ENST00000635754 TINCRA0A1B0GVN0 87 aa9.97□□□□□ -0.81
CLN6-211ENST00000635754 SERF1AO75920 110 aa9.97□□□□□ -0.81
CLN6-211ENST00000635754 SDIM1Q6ZPB5 146 aa9.97□□□□□ -0.81
CLN6-211ENST00000635754 C2orf48Q96LS8 159 aa9.97□□□□□ -0.81
CLN6-211ENST00000635754 HAMPP81172 84 aa9.96□□□□□ -0.82
CLN6-211ENST00000635754 FAM19A2Q8N3H0 131 aa9.96□□□□□ -0.82
CLN6-211ENST00000635754 LINC00469Q8N7U9 141 aa9.96□□□□□ -0.82
CLN6-211ENST00000635754 CDKN2A-AS1Q9UH64 79 aa9.96□□□□□ -0.82
CLN6-211ENST00000635754 PKIGQ9Y2B9 76 aa9.96□□□□□ -0.82
CLN6-211ENST00000635754 F8WDY8 70 aa9.95□□□□□ -0.82
CLN6-211ENST00000635754 PACRGQ96M98 296 aaPredicted RBP9.95□□□□□ -0.82
CLN6-211ENST00000635754 LINC00310P59036 64 aa9.94□□□□□ -0.82
CLN6-211ENST00000635754 Q6ZRU5 148 aa9.94□□□□□ -0.82
CLN6-211ENST00000635754 IFI27L1Q96BM0 104 aa9.94□□□□□ -0.82
CLN6-211ENST00000635754 CHAC1Q9BUX1 264 aa9.94□□□□□ -0.82
CLN6-211ENST00000635754 NDUFA1O15239 70 aa9.93□□□□□ -0.82
CLN6-211ENST00000635754 HIST1H2BKO60814 126 aa9.93□□□□□ -0.82
CLN6-211ENST00000635754 HIST1H2BJP06899 126 aa9.93□□□□□ -0.82
CLN6-211ENST00000635754 HIST1H2BOP23527 126 aa9.93□□□□□ -0.82
CLN6-211ENST00000635754 HIST1H2BBP33778 126 aa9.93□□□□□ -0.82
CLN6-211ENST00000635754 HIST1H2BDP58876 126 aa9.93□□□□□ -0.82
CLN6-211ENST00000635754 HIST1H2BCP62807 126 aa9.93□□□□□ -0.82
CLN6-211ENST00000635754 HIST2H2BEQ16778 126 aa9.93□□□□□ -0.82
CLN6-211ENST00000635754 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.93□□□□□ -0.82
CLN6-211ENST00000635754 SCXQ7RTU7 201 aa9.93□□□□□ -0.82
CLN6-211ENST00000635754 HIST1H2BHQ93079 126 aa9.93□□□□□ -0.82
CLN6-211ENST00000635754 HIST1H2BNQ99877 126 aa9.93□□□□□ -0.82
CLN6-211ENST00000635754 HIST1H2BMQ99879 126 aa9.93□□□□□ -0.82
CLN6-211ENST00000635754 IGLV5-45A0A087WSX0 123 aa9.92□□□□□ -0.82
CLN6-211ENST00000635754 PRSS2P07478 247 aa9.92□□□□□ -0.82
CLN6-211ENST00000635754 IGLC3P0DOY3 106 aa9.92□□□□□ -0.82
CLN6-211ENST00000635754 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.92□□□□□ -0.82
CLN6-211ENST00000635754 KIAA0087Q14695 138 aa9.91□□□□□ -0.82
CLN6-211ENST00000635754 TOMM7Q9P0U1 55 aa9.91□□□□□ -0.82
CLN6-211ENST00000635754 APOBP04114 4563 aaKnown RBP9.91□□□□□ -0.82
CLN6-211ENST00000635754 H3BRM9 83 aa9.9□□□□□ -0.82
CLN6-211ENST00000635754 NUPR1O60356 82 aa9.9□□□□□ -0.82
CLN6-211ENST00000635754 LEPROTL1O95214 131 aa9.9□□□□□ -0.82
CLN6-211ENST00000635754 Q8N1X5 172 aa9.9□□□□□ -0.82
CLN6-211ENST00000635754 CIRBP-AS1Q8TBR5 109 aa9.9□□□□□ -0.82
CLN6-211ENST00000635754 MRPL35Q9NZE8 188 aaKnown RBP9.9□□□□□ -0.82
CLN6-211ENST00000635754 LOC107984640A0A0U1RRK4 108 aa9.9□□□□□ -0.83
CLN6-211ENST00000635754 SMIM1B2RUZ4 78 aa9.9□□□□□ -0.83
CLN6-211ENST00000635754 CHTF8P0CG12 524 aa9.9□□□□□ -0.83
CLN6-211ENST00000635754 CIRBPQ14011 172 aaKnown RBP9.9□□□□□ -0.83
CLN6-211ENST00000635754 RNF151Q2KHN1 245 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms