RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 PANO1I0J062 215 aa10.03□□□□□ -0.8
LINC00339-207ENST00000634712 SYCNQ0VAF6 134 aa10.03□□□□□ -0.8
LINC00339-207ENST00000634712 Q6ZN92 141 aa10.03□□□□□ -0.8
LINC00339-207ENST00000634712 FAM104AQ969W3 186 aa10.03□□□□□ -0.8
LINC00339-207ENST00000634712 IGLV4-69A0A075B6H9 119 aa10.02□□□□□ -0.8
LINC00339-207ENST00000634712 IGLV4-3A0A075B6K6 122 aa10.02□□□□□ -0.8
LINC00339-207ENST00000634712 APOC3P02656 99 aa10.02□□□□□ -0.8
LINC00339-207ENST00000634712 CHTF8P0CG12 524 aa10.02□□□□□ -0.8
LINC00339-207ENST00000634712 TEX43Q6ZNM6 134 aa10.02□□□□□ -0.8
LINC00339-207ENST00000634712 PRSS3P2Q8NHM4 247 aa10.02□□□□□ -0.8
LINC00339-207ENST00000634712 C2orf88Q9BSF0 95 aa10.02□□□□□ -0.8
LINC00339-207ENST00000634712 IGKV2-24A0A0C4DH68 120 aa10.01□□□□□ -0.81
LINC00339-207ENST00000634712 MT-ND6P03923 174 aa10.01□□□□□ -0.81
LINC00339-207ENST00000634712 FABP9Q0Z7S8 132 aa10.01□□□□□ -0.81
LINC00339-207ENST00000634712 CIRBPQ14011 172 aaKnown RBP10.01□□□□□ -0.81
LINC00339-207ENST00000634712 CAMK2N2Q96S95 79 aa10.01□□□□□ -0.81
LINC00339-207ENST00000634712 VCX2Q9H322 139 aa10.01□□□□□ -0.81
LINC00339-207ENST00000634712 A0A087WYN8 130 aa10.01□□□□□ -0.81
LINC00339-207ENST00000634712 TGIF2-C20orf24A0A0A6YYL0 155 aa10.01□□□□□ -0.81
LINC00339-207ENST00000634712 SNAPINO95295 136 aa10.01□□□□□ -0.81
LINC00339-207ENST00000634712 MAJINQ3KP22 176 aa10.01□□□□□ -0.81
LINC00339-207ENST00000634712 SPACA4Q8TDM5 124 aa10.01□□□□□ -0.81
LINC00339-207ENST00000634712 IGHV3OR16-9A0A0B4J2B5 98 aa10□□□□□ -0.81
LINC00339-207ENST00000634712 RPL37AP61513 92 aaKnown RBP10□□□□□ -0.81
LINC00339-207ENST00000634712 SVBPQ8N300 66 aa10□□□□□ -0.81
LINC00339-207ENST00000634712 OR10D4PQ8NGN7 298 aa10□□□□□ -0.81
LINC00339-207ENST00000634712 MRPL18Q9H0U6 180 aaKnown RBP10□□□□□ -0.81
LINC00339-207ENST00000634712 LINC00474Q9P2X8 69 aa10□□□□□ -0.81
LINC00339-207ENST00000634712 NPSP0C0P6 89 aa9.99□□□□□ -0.81
LINC00339-207ENST00000634712 SPAG11BQ08648 103 aa9.99□□□□□ -0.81
LINC00339-207ENST00000634712 PAPPA-AS1Q5QFB9 102 aa9.99□□□□□ -0.81
LINC00339-207ENST00000634712 ORAOV1Q8WV07 137 aa9.99□□□□□ -0.81
LINC00339-207ENST00000634712 C2orf48Q96LS8 159 aa9.99□□□□□ -0.81
LINC00339-207ENST00000634712 ALKBH7Q9BT30 221 aaPredicted RBP9.99□□□□□ -0.81
LINC00339-207ENST00000634712 Q6ZRU5 148 aa9.98□□□□□ -0.81
LINC00339-207ENST00000634712 IGIPA6NJ69 53 aa9.97□□□□□ -0.81
LINC00339-207ENST00000634712 LINC00242Q5T6M2 205 aa9.97□□□□□ -0.81
LINC00339-207ENST00000634712 STPG4Q8N801 248 aa9.97□□□□□ -0.81
LINC00339-207ENST00000634712 FLG2Q5D862 2391 aaPredicted RBP9.96□□□□□ -0.81
LINC00339-207ENST00000634712 A0A096LNI7 61 aa9.96□□□□□ -0.82
LINC00339-207ENST00000634712 LOC107984640A0A0U1RRK4 108 aa9.96□□□□□ -0.82
LINC00339-207ENST00000634712 UBE2D1P51668 147 aa9.96□□□□□ -0.82
LINC00339-207ENST00000634712 FA2HQ7L5A8 372 aa9.96□□□□□ -0.82
LINC00339-207ENST00000634712 TOMM6Q96B49 74 aa9.96□□□□□ -0.82
LINC00339-207ENST00000634712 SCGB3A1Q96QR1 104 aa9.96□□□□□ -0.82
LINC00339-207ENST00000634712 AMELXQ99217 191 aa9.96□□□□□ -0.82
LINC00339-207ENST00000634712 SMCO4Q9NRQ5 59 aa9.96□□□□□ -0.82
LINC00339-207ENST00000634712 PLAC8Q9NZF1 115 aa9.96□□□□□ -0.82
LINC00339-207ENST00000634712 TRAPPC1Q9Y5R8 145 aa9.96□□□□□ -0.82
LINC00339-207ENST00000634712 A0A087WZ39 114 aa9.95□□□□□ -0.82
LINC00339-207ENST00000634712 LINC01549A6NIU2 74 aa9.95□□□□□ -0.82
LINC00339-207ENST00000634712 F8WDY8 70 aa9.95□□□□□ -0.82
LINC00339-207ENST00000634712 GAGE2BQ13066 116 aa9.95□□□□□ -0.82
LINC00339-207ENST00000634712 ZC2HC1BQ5TFG8 222 aa9.95□□□□□ -0.82
LINC00339-207ENST00000634712 C7orf33Q8WU49 177 aa9.95□□□□□ -0.82
LINC00339-207ENST00000634712 TIMM17AQ99595 171 aa9.95□□□□□ -0.82
LINC00339-207ENST00000634712 NDUFA1O15239 70 aa9.93□□□□□ -0.82
LINC00339-207ENST00000634712 SEC11AP67812 179 aa9.93□□□□□ -0.82
LINC00339-207ENST00000634712 LINC00173Q6ZV60 143 aa9.93□□□□□ -0.82
LINC00339-207ENST00000634712 ERASQ7Z444 233 aa9.93□□□□□ -0.82
LINC00339-207ENST00000634712 PTTG1IPP53801 180 aa9.92□□□□□ -0.82
LINC00339-207ENST00000634712 KRTAP10-4P60372 401 aaPredicted RBP9.92□□□□□ -0.82
LINC00339-207ENST00000634712 RNF151Q2KHN1 245 aa9.92□□□□□ -0.82
LINC00339-207ENST00000634712 LINC01546A6NGU7 62 aa9.91□□□□□ -0.82
LINC00339-207ENST00000634712 RPL18AQ02543 176 aaKnown RBP9.91□□□□□ -0.82
LINC00339-207ENST00000634712 LINC01561Q8N1V8 128 aa9.91□□□□□ -0.82
LINC00339-207ENST00000634712 GEMIN7Q9H840 131 aaKnown RBP9.91□□□□□ -0.82
LINC00339-207ENST00000634712 MRPL35Q9NZE8 188 aaKnown RBP9.91□□□□□ -0.82
LINC00339-207ENST00000634712 A0A0J9YXV3 536 aa9.9□□□□□ -0.82
LINC00339-207ENST00000634712 J3QL48 77 aa9.9□□□□□ -0.82
LINC00339-207ENST00000634712 PRSS2P07478 247 aa9.9□□□□□ -0.82
LINC00339-207ENST00000634712 HERVK_113P63121 156 aa9.9□□□□□ -0.82
LINC00339-207ENST00000634712 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.89□□□□□ -0.83
LINC00339-207ENST00000634712 UNQ6190/PRO20217Q6UXQ8 127 aa9.89□□□□□ -0.83
LINC00339-207ENST00000634712 FAM19A3Q7Z5A8 133 aa9.89□□□□□ -0.83
LINC00339-207ENST00000634712 PACRGQ96M98 296 aaPredicted RBP9.89□□□□□ -0.83
LINC00339-207ENST00000634712 MYCBP2O75592 4640 aa9.89□□□□□ -0.83
LINC00339-207ENST00000634712 LINC00614P0C842 121 aa9.88□□□□□ -0.83
LINC00339-207ENST00000634712 KIAA0087Q14695 138 aa9.88□□□□□ -0.83
LINC00339-207ENST00000634712 C10orf25Q5T742 122 aa9.88□□□□□ -0.83
LINC00339-207ENST00000634712 TOMM7Q9P0U1 55 aa9.88□□□□□ -0.83
LINC00339-207ENST00000634712 DMBT1Q9UGM3 2413 aaPredicted RBP9.87□□□□□ -0.83
LINC00339-207ENST00000634712 RAB5BP61020 215 aa9.87□□□□□ -0.83
LINC00339-207ENST00000634712 C6orf226Q5I0X4 101 aa9.87□□□□□ -0.83
LINC00339-207ENST00000634712 C18orf32Q8TCD1 76 aa9.87□□□□□ -0.83
LINC00339-207ENST00000634712 CKS1BP61024 79 aa9.86□□□□□ -0.83
LINC00339-207ENST00000634712 LINC00469Q8N7U9 141 aa9.86□□□□□ -0.83
LINC00339-207ENST00000634712 C6orf48Q9UBA6 75 aa9.86□□□□□ -0.83
LINC00339-207ENST00000634712 CDKN2A-AS1Q9UH64 79 aa9.86□□□□□ -0.83
LINC00339-207ENST00000634712 TRBV30A0A0K0K1B3 111 aa9.85□□□□□ -0.83
LINC00339-207ENST00000634712 KRTAP29-1A8MX34 341 aaPredicted RBP9.85□□□□□ -0.83
LINC00339-207ENST00000634712 PMVKQ15126 192 aa9.85□□□□□ -0.83
LINC00339-207ENST00000634712 C2orf82Q6UX34 121 aa9.85□□□□□ -0.83
LINC00339-207ENST00000634712 CST9LQ9H4G1 147 aa9.85□□□□□ -0.83
LINC00339-207ENST00000634712 TINCRA0A1B0GVN0 87 aa9.84□□□□□ -0.83
LINC00339-207ENST00000634712 TLX1NBP0CAT3 122 aa9.84□□□□□ -0.83
LINC00339-207ENST00000634712 NDUFA6P56556 154 aa9.84□□□□□ -0.83
LINC00339-207ENST00000634712 C9orf116Q5BN46 136 aaPredicted RBP9.84□□□□□ -0.83
LINC00339-207ENST00000634712 A0A1W2PNN7 141 aa9.83□□□□□ -0.84
LINC00339-207ENST00000634712 HBDP02042 147 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms