RNA–Protein interactions for RNA: ENST00000634403.1

SMARCA2-222, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 2

Gene SMARCA2, Length 497 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-222	ENST00000634403	LINC00469	Q8N7U9	141 aa		3.78	□□□□□ -1.8
SMARCA2-222	ENST00000634403	PLEKHB2	Q96CS7	222 aa		3.78	□□□□□ -1.8
SMARCA2-222	ENST00000634403		J3QQQ9	107 aa		3.77	□□□□□ -1.81
SMARCA2-222	ENST00000634403	SMIM13	P0DJ93	91 aa		3.77	□□□□□ -1.81
SMARCA2-222	ENST00000634403	UBE2D1	P51668	147 aa		3.77	□□□□□ -1.81
SMARCA2-222	ENST00000634403	FXYD2	P54710	66 aa		3.77	□□□□□ -1.81
SMARCA2-222	ENST00000634403		Q6ZUT4	128 aa		3.77	□□□□□ -1.81
SMARCA2-222	ENST00000634403	OR5A1	Q8NGJ0	315 aa		3.77	□□□□□ -1.81
SMARCA2-222	ENST00000634403	TMEM243	Q9BU79	118 aa		3.77	□□□□□ -1.81
SMARCA2-222	ENST00000634403	KRTAP1-5	Q9BYS1	174 aa		3.77	□□□□□ -1.81
SMARCA2-222	ENST00000634403	SPANXB1	Q9NS25	103 aa	Predicted RBP	3.77	□□□□□ -1.81
SMARCA2-222	ENST00000634403	FN1	P02751	2386 aa	Known RBP	3.77	□□□□□ -1.81
SMARCA2-222	ENST00000634403	GCN1	Q92616	2671 aa	Known RBP	3.77	□□□□□ -1.81
SMARCA2-222	ENST00000634403	IGHV1-58	A0A0C4DH39	117 aa		3.76	□□□□□ -1.81
SMARCA2-222	ENST00000634403		A0A0J9YY99	117 aa		3.76	□□□□□ -1.81
SMARCA2-222	ENST00000634403	LOC100131303	A0A0U1RQF7	123 aa		3.76	□□□□□ -1.81
SMARCA2-222	ENST00000634403		A0A1B0GWB2	263 aa		3.76	□□□□□ -1.81
SMARCA2-222	ENST00000634403	MIF	P14174	115 aa		3.76	□□□□□ -1.81
SMARCA2-222	ENST00000634403	LGALS3	P17931	250 aa	Known RBP	3.76	□□□□□ -1.81
SMARCA2-222	ENST00000634403	TSPEAR-AS2	P59090	65 aa		3.76	□□□□□ -1.81
SMARCA2-222	ENST00000634403	EGFEM1P	Q0D2K5	195 aa		3.76	□□□□□ -1.81
SMARCA2-222	ENST00000634403		Q6ZVH6	145 aa		3.76	□□□□□ -1.81
SMARCA2-222	ENST00000634403	HIST1H4G	Q99525	98 aa		3.76	□□□□□ -1.81
SMARCA2-222	ENST00000634403	CDC42SE2	Q9NRR3	84 aa		3.76	□□□□□ -1.81
SMARCA2-222	ENST00000634403	PRO0255	Q9UI72	69 aa		3.76	□□□□□ -1.81
SMARCA2-222	ENST00000634403	WNK1	Q9H4A3	2382 aa		3.76	□□□□□ -1.81
SMARCA2-222	ENST00000634403	OTOG	Q6ZRI0	2925 aa		3.76	□□□□□ -1.81
SMARCA2-222	ENST00000634403	TRBV6-8	A0A0A6YYG3	113 aa		3.75	□□□□□ -1.81
SMARCA2-222	ENST00000634403	UBE2L6	O14933	153 aa		3.75	□□□□□ -1.81
SMARCA2-222	ENST00000634403	IGHV3-30-3	P0DP02	117 aa		3.75	□□□□□ -1.81
SMARCA2-222	ENST00000634403	DEFB130B	P0DP73	79 aa		3.75	□□□□□ -1.81
SMARCA2-222	ENST00000634403	DEFB130A	P0DP74	79 aa		3.75	□□□□□ -1.81
SMARCA2-222	ENST00000634403	HERVK_113	P63121	156 aa		3.75	□□□□□ -1.81
SMARCA2-222	ENST00000634403	DEFB135	Q30KP9	77 aa		3.75	□□□□□ -1.81
SMARCA2-222	ENST00000634403	C12orf74	Q32Q52	190 aa		3.75	□□□□□ -1.81
SMARCA2-222	ENST00000634403	RNASE13	Q5GAN3	156 aa	Known RBP	3.75	□□□□□ -1.81
SMARCA2-222	ENST00000634403	FAM222A	Q5U5X8	452 aa		3.75	□□□□□ -1.81
SMARCA2-222	ENST00000634403	SCGB1D4	Q6XE38	83 aa		3.75	□□□□□ -1.81
SMARCA2-222	ENST00000634403	C3orf56	Q8N813	242 aa		3.75	□□□□□ -1.81
SMARCA2-222	ENST00000634403		Q8NAQ8	132 aa		3.75	□□□□□ -1.81
SMARCA2-222	ENST00000634403	TMEM101	Q96IK0	257 aa		3.75	□□□□□ -1.81
SMARCA2-222	ENST00000634403	VSIG2	Q96IQ7	327 aa		3.75	□□□□□ -1.81
SMARCA2-222	ENST00000634403	GEMIN7	Q9H840	131 aa	Known RBP	3.75	□□□□□ -1.81
SMARCA2-222	ENST00000634403	CUBN	O60494	3623 aa		3.74	□□□□□ -1.81
SMARCA2-222	ENST00000634403		K7EP13	123 aa		3.74	□□□□□ -1.81
SMARCA2-222	ENST00000634403	CCL25	O15444	150 aa		3.74	□□□□□ -1.81
SMARCA2-222	ENST00000634403	COX6A2	Q02221	97 aa		3.74	□□□□□ -1.81
SMARCA2-222	ENST00000634403	SRSF9	Q13242	221 aa	Known RBP eCLIP	3.74	□□□□□ -1.81
SMARCA2-222	ENST00000634403	VAMP3	Q15836	100 aa		3.74	□□□□□ -1.81
SMARCA2-222	ENST00000634403	LINC00242	Q5T6M2	205 aa		3.74	□□□□□ -1.81
SMARCA2-222	ENST00000634403	AMMECR1L	Q6DCA0	310 aa		3.74	□□□□□ -1.81
SMARCA2-222	ENST00000634403	ATP6V0E2	Q8NHE4	81 aa		3.74	□□□□□ -1.81
SMARCA2-222	ENST00000634403	PRAC1	Q96KF2	57 aa		3.74	□□□□□ -1.81
SMARCA2-222	ENST00000634403	CDKN2A-AS1	Q9UH64	79 aa		3.74	□□□□□ -1.81
SMARCA2-222	ENST00000634403	HECTD1	Q9ULT8	2610 aa		3.74	□□□□□ -1.81
SMARCA2-222	ENST00000634403	MTOR	P42345	2549 aa		3.73	□□□□□ -1.81
SMARCA2-222	ENST00000634403	TRAV26-1	A0A087WT03	109 aa		3.73	□□□□□ -1.81
SMARCA2-222	ENST00000634403	TRAV8-3	A0A0A6YYJ7	113 aa		3.73	□□□□□ -1.81
SMARCA2-222	ENST00000634403		A0A0J9YXY3	114 aa		3.73	□□□□□ -1.81
SMARCA2-222	ENST00000634403	TEX48	A0A1B0GUV7	120 aa		3.73	□□□□□ -1.81
SMARCA2-222	ENST00000634403		A0A1W2PPM0	123 aa		3.73	□□□□□ -1.81
SMARCA2-222	ENST00000634403	IGLL5	B9A064	214 aa		3.73	□□□□□ -1.81
SMARCA2-222	ENST00000634403		H3BUT2	72 aa		3.73	□□□□□ -1.81
SMARCA2-222	ENST00000634403	TIMM17B	O60830	172 aa		3.73	□□□□□ -1.81
SMARCA2-222	ENST00000634403	IGHV3-30	P01768	117 aa		3.73	□□□□□ -1.81
SMARCA2-222	ENST00000634403	ATP5G1	P05496	136 aa		3.73	□□□□□ -1.81
SMARCA2-222	ENST00000634403	SPINK8	P0C7L1	97 aa		3.73	□□□□□ -1.81
SMARCA2-222	ENST00000634403	CFC1B	P0CG36	223 aa		3.73	□□□□□ -1.81
SMARCA2-222	ENST00000634403	CFC1	P0CG37	223 aa		3.73	□□□□□ -1.81
SMARCA2-222	ENST00000634403	SPART-AS1	P0CW21	52 aa		3.73	□□□□□ -1.81
SMARCA2-222	ENST00000634403	IGHV3-30-5	P0DP03	117 aa		3.73	□□□□□ -1.81
SMARCA2-222	ENST00000634403	DAD1	P61803	113 aa		3.73	□□□□□ -1.81
SMARCA2-222	ENST00000634403	ZFAND6	Q6FIF0	208 aa		3.73	□□□□□ -1.81
SMARCA2-222	ENST00000634403	C10orf126	Q8N4M7	172 aa		3.73	□□□□□ -1.81
SMARCA2-222	ENST00000634403	RAB37	Q96AX2	223 aa		3.73	□□□□□ -1.81
SMARCA2-222	ENST00000634403	NHP2	Q9NX24	153 aa	Known RBP	3.73	□□□□□ -1.81
SMARCA2-222	ENST00000634403	NDUFA12	Q9UI09	145 aa		3.73	□□□□□ -1.81
SMARCA2-222	ENST00000634403	C2CD3	Q4AC94	2353 aa		3.72	□□□□□ -1.81
SMARCA2-222	ENST00000634403	IGLV4-60	A0A075B6I1	120 aa		3.72	□□□□□ -1.81
SMARCA2-222	ENST00000634403	IGHV3-64	A0A075B6Q5	118 aa		3.72	□□□□□ -1.81
SMARCA2-222	ENST00000634403	CYSRT1	A8MQ03	144 aa		3.72	□□□□□ -1.81
SMARCA2-222	ENST00000634403	TMEM238	C9JI98	176 aa		3.72	□□□□□ -1.81
SMARCA2-222	ENST00000634403		F5H768	121 aa		3.72	□□□□□ -1.81
SMARCA2-222	ENST00000634403		K7EP34	96 aa		3.72	□□□□□ -1.81
SMARCA2-222	ENST00000634403	NDUFA1	O15239	70 aa		3.72	□□□□□ -1.81
SMARCA2-222	ENST00000634403	CDK2AP2	O75956	126 aa		3.72	□□□□□ -1.81
SMARCA2-222	ENST00000634403	GTF2H5	Q6ZYL4	71 aa		3.72	□□□□□ -1.81
SMARCA2-222	ENST00000634403	SH2D6	Q7Z4S9	175 aa		3.72	□□□□□ -1.81
SMARCA2-222	ENST00000634403	LITAF	Q99732	161 aa		3.72	□□□□□ -1.81
SMARCA2-222	ENST00000634403	CHCHD5	Q9BSY4	110 aa		3.72	□□□□□ -1.81
SMARCA2-222	ENST00000634403	SPANXD	Q9BXN6	97 aa		3.72	□□□□□ -1.81
SMARCA2-222	ENST00000634403	SPANXC	Q9NY87	97 aa		3.72	□□□□□ -1.81
SMARCA2-222	ENST00000634403	CELA1	Q9UNI1	258 aa		3.72	□□□□□ -1.81
SMARCA2-222	ENST00000634403	HIVEP1	P15822	2718 aa		3.72	□□□□□ -1.81
SMARCA2-222	ENST00000634403	NF1	P21359	2839 aa		3.72	□□□□□ -1.81
SMARCA2-222	ENST00000634403	SETX	Q7Z333	2677 aa	Known RBP	3.72	□□□□□ -1.81
SMARCA2-222	ENST00000634403	TRAV13-1	A0A0B4J241	112 aa		3.71	□□□□□ -1.82
SMARCA2-222	ENST00000634403		A4D1N5	150 aa		3.71	□□□□□ -1.82
SMARCA2-222	ENST00000634403		K7ERJ3	54 aa		3.71	□□□□□ -1.82
SMARCA2-222	ENST00000634403	DEFB4A	O15263	64 aa		3.71	□□□□□ -1.82

Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms