RNA–Protein interactions for RNA: ENST00000630553.1

SOX2-OT-257, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 905 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-257ENST00000630553 LINC00959A0A1B0GUT2 108 aa6.64□□□□□ -1.35
SOX2-OT-257ENST00000630553 DGAT2L7PQ6IED9 249 aa6.64□□□□□ -1.35
SOX2-OT-257ENST00000630553 PRSS3P2Q8NHM4 247 aa6.64□□□□□ -1.35
SOX2-OT-257ENST00000630553 AMELXQ99217 191 aa6.64□□□□□ -1.35
SOX2-OT-257ENST00000630553 AP5S1Q9NUS5 200 aa6.64□□□□□ -1.35
SOX2-OT-257ENST00000630553 A0A096LNJ9 63 aa6.63□□□□□ -1.35
SOX2-OT-257ENST00000630553 ATP6V1G1O75348 118 aa6.63□□□□□ -1.35
SOX2-OT-257ENST00000630553 SCO1O75880 301 aa6.63□□□□□ -1.35
SOX2-OT-257ENST00000630553 FOXI1Q12951 378 aa6.63□□□□□ -1.35
SOX2-OT-257ENST00000630553 LINC00173Q6ZV60 143 aa6.63□□□□□ -1.35
SOX2-OT-257ENST00000630553 FAM19A3Q7Z5A8 133 aa6.63□□□□□ -1.35
SOX2-OT-257ENST00000630553 CHCHD10Q8WYQ3 142 aaPredicted RBP6.63□□□□□ -1.35
SOX2-OT-257ENST00000630553 TMEM141Q96I45 108 aa6.63□□□□□ -1.35
SOX2-OT-257ENST00000630553 TMA7Q9Y2S6 64 aaKnown RBP6.63□□□□□ -1.35
SOX2-OT-257ENST00000630553 IGLV10-54A0A075B6I4 117 aa6.62□□□□□ -1.35
SOX2-OT-257ENST00000630553 C1orf196B1AJZ1 125 aa6.62□□□□□ -1.35
SOX2-OT-257ENST00000630553 TRGC2P03986 189 aa6.62□□□□□ -1.35
SOX2-OT-257ENST00000630553 LINC00614P0C842 121 aa6.62□□□□□ -1.35
SOX2-OT-257ENST00000630553 RAB5BP61020 215 aa6.62□□□□□ -1.35
SOX2-OT-257ENST00000630553 C14orf177Q52M58 125 aa6.62□□□□□ -1.35
SOX2-OT-257ENST00000630553 CD164L2Q6UWJ8 174 aa6.62□□□□□ -1.35
SOX2-OT-257ENST00000630553 FA2HQ7L5A8 372 aa6.62□□□□□ -1.35
SOX2-OT-257ENST00000630553 ERASQ7Z444 233 aa6.62□□□□□ -1.35
SOX2-OT-257ENST00000630553 LRP2P98164 4655 aa6.62□□□□□ -1.35
SOX2-OT-257ENST00000630553 TMEM238LA0A1B0GVL6 79 aa6.61□□□□□ -1.35
SOX2-OT-257ENST00000630553 SS18Q15532 418 aa6.61□□□□□ -1.35
SOX2-OT-257ENST00000630553 Q6ZSA8 131 aa6.61□□□□□ -1.35
SOX2-OT-257ENST00000630553 SCXQ7RTU7 201 aa6.61□□□□□ -1.35
SOX2-OT-257ENST00000630553 BAALCQ8WXS3 180 aa6.61□□□□□ -1.35
SOX2-OT-257ENST00000630553 CHCHD1Q96BP2 118 aaKnown RBP6.61□□□□□ -1.35
SOX2-OT-257ENST00000630553 GAGE12HA6NDE8 117 aa6.6□□□□□ -1.35
SOX2-OT-257ENST00000630553 USP17L23D6RBM5 183 aa6.6□□□□□ -1.35
SOX2-OT-257ENST00000630553 HBDP02042 147 aa6.6□□□□□ -1.35
SOX2-OT-257ENST00000630553 RNASE13Q5GAN3 156 aaKnown RBP6.6□□□□□ -1.35
SOX2-OT-257ENST00000630553 PAPPA-AS1Q5QFB9 102 aa6.6□□□□□ -1.35
SOX2-OT-257ENST00000630553 C15orf56Q8N910 161 aa6.6□□□□□ -1.35
SOX2-OT-257ENST00000630553 OPRPNQ99935 248 aaPredicted RBP6.6□□□□□ -1.35
SOX2-OT-257ENST00000630553 GVQW2A0A096LPI5 108 aaPredicted RBP6.59□□□□□ -1.35
SOX2-OT-257ENST00000630553 IGHV3OR16-9A0A0B4J2B5 98 aa6.59□□□□□ -1.35
SOX2-OT-257ENST00000630553 IFITM10A6NMD0 228 aa6.59□□□□□ -1.35
SOX2-OT-257ENST00000630553 UBE2D1P51668 147 aa6.59□□□□□ -1.35
SOX2-OT-257ENST00000630553 LINC00310P59036 64 aa6.59□□□□□ -1.35
SOX2-OT-257ENST00000630553 CNBPP62633 177 aaKnown RBP6.59□□□□□ -1.35
SOX2-OT-257ENST00000630553 PDZD11Q5EBL8 140 aa6.59□□□□□ -1.35
SOX2-OT-257ENST00000630553 Q6ZN92 141 aa6.59□□□□□ -1.35
SOX2-OT-257ENST00000630553 TEX43Q6ZNM6 134 aa6.59□□□□□ -1.35
SOX2-OT-257ENST00000630553 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.58□□□□□ -1.36
SOX2-OT-257ENST00000630553 TRAV13-1A0A0B4J241 112 aa6.58□□□□□ -1.36
SOX2-OT-257ENST00000630553 IGKV3OR2-268A0A0C4DH90 116 aa6.58□□□□□ -1.36
SOX2-OT-257ENST00000630553 LECT2O14960 151 aa6.58□□□□□ -1.36
SOX2-OT-257ENST00000630553 XCL1P47992 114 aa6.58□□□□□ -1.36
SOX2-OT-257ENST00000630553 KRTAP10-4P60372 401 aaPredicted RBP6.58□□□□□ -1.36
SOX2-OT-257ENST00000630553 C2orf88Q9BSF0 95 aa6.58□□□□□ -1.36
SOX2-OT-257ENST00000630553 IGHV1-58A0A0C4DH39 117 aa6.57□□□□□ -1.36
SOX2-OT-257ENST00000630553 PRSS1P07477 247 aa6.57□□□□□ -1.36
SOX2-OT-257ENST00000630553 LINC00242Q5T6M2 205 aa6.57□□□□□ -1.36
SOX2-OT-257ENST00000630553 CFAP161Q6P656 301 aa6.57□□□□□ -1.36
SOX2-OT-257ENST00000630553 LINC01561Q8N1V8 128 aa6.57□□□□□ -1.36
SOX2-OT-257ENST00000630553 SCGB3A1Q96QR1 104 aa6.57□□□□□ -1.36
SOX2-OT-257ENST00000630553 CHAC1Q9BUX1 264 aa6.57□□□□□ -1.36
SOX2-OT-257ENST00000630553 IGLV5-45A0A087WSX0 123 aa6.56□□□□□ -1.36
SOX2-OT-257ENST00000630553 COX7A2LO14548 114 aa6.56□□□□□ -1.36
SOX2-OT-257ENST00000630553 HIST1H2BKO60814 126 aa6.56□□□□□ -1.36
SOX2-OT-257ENST00000630553 HIST1H2BJP06899 126 aa6.56□□□□□ -1.36
SOX2-OT-257ENST00000630553 HIST1H2BOP23527 126 aa6.56□□□□□ -1.36
SOX2-OT-257ENST00000630553 HIST1H2BBP33778 126 aa6.56□□□□□ -1.36
SOX2-OT-257ENST00000630553 HIST1H2BDP58876 126 aa6.56□□□□□ -1.36
SOX2-OT-257ENST00000630553 RPL37AP61513 92 aaKnown RBP6.56□□□□□ -1.36
SOX2-OT-257ENST00000630553 HIST1H2BCP62807 126 aa6.56□□□□□ -1.36
SOX2-OT-257ENST00000630553 HIST2H2BEQ16778 126 aa6.56□□□□□ -1.36
SOX2-OT-257ENST00000630553 LINC01620Q4KN68 170 aa6.56□□□□□ -1.36
SOX2-OT-257ENST00000630553 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.56□□□□□ -1.36
SOX2-OT-257ENST00000630553 HIST1H2BHQ93079 126 aa6.56□□□□□ -1.36
SOX2-OT-257ENST00000630553 HIST1H2BNQ99877 126 aa6.56□□□□□ -1.36
SOX2-OT-257ENST00000630553 HIST1H2BMQ99879 126 aa6.56□□□□□ -1.36
SOX2-OT-257ENST00000630553 VCX2Q9H322 139 aa6.56□□□□□ -1.36
SOX2-OT-257ENST00000630553 A0A087WZ39 114 aa6.55□□□□□ -1.36
SOX2-OT-257ENST00000630553 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.55□□□□□ -1.36
SOX2-OT-257ENST00000630553 SERF1AO75920 110 aa6.55□□□□□ -1.36
SOX2-OT-257ENST00000630553 ATP5LO75964 103 aa6.55□□□□□ -1.36
SOX2-OT-257ENST00000630553 SEC11AP67812 179 aa6.55□□□□□ -1.36
SOX2-OT-257ENST00000630553 PMVKQ15126 192 aa6.55□□□□□ -1.36
SOX2-OT-257ENST00000630553 XP32Q5T750 250 aa6.55□□□□□ -1.36
SOX2-OT-257ENST00000630553 BAGE3Q86Y29 109 aa6.55□□□□□ -1.36
SOX2-OT-257ENST00000630553 OR10D4PQ8NGN7 298 aa6.55□□□□□ -1.36
SOX2-OT-257ENST00000630553 CIRBP-AS1Q8TBR5 109 aa6.55□□□□□ -1.36
SOX2-OT-257ENST00000630553 PKHD1L1Q86WI1 4243 aa6.55□□□□□ -1.36
SOX2-OT-257ENST00000630553 HSBP1O75506 76 aa6.54□□□□□ -1.36
SOX2-OT-257ENST00000630553 SLPIP03973 132 aa6.54□□□□□ -1.36
SOX2-OT-257ENST00000630553 HERVK_113P63121 156 aa6.54□□□□□ -1.36
SOX2-OT-257ENST00000630553 PMCHL1Q16048 86 aa6.54□□□□□ -1.36
SOX2-OT-257ENST00000630553 COA6Q5JTJ3 125 aaKnown RBP6.54□□□□□ -1.36
SOX2-OT-257ENST00000630553 C9orf163Q8N9P6 203 aa6.54□□□□□ -1.36
SOX2-OT-257ENST00000630553 CST9LQ9H4G1 147 aa6.54□□□□□ -1.36
SOX2-OT-257ENST00000630553 IGHV3-64A0A075B6Q5 118 aa6.53□□□□□ -1.36
SOX2-OT-257ENST00000630553 TRAV12-1A0A0B4J245 112 aa6.53□□□□□ -1.36
SOX2-OT-257ENST00000630553 TINCRA0A1B0GVN0 87 aa6.53□□□□□ -1.36
SOX2-OT-257ENST00000630553 hDV102S1A0JD36 115 aa6.53□□□□□ -1.36
SOX2-OT-257ENST00000630553 F8WDY8 70 aa6.53□□□□□ -1.36
SOX2-OT-257ENST00000630553 APOMO95445 188 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms