RNA–Protein interactions for RNA: ENST00000628509.1

FOXCUT-201, FOXC1 upstream transcript, humanhuman

TSL 3 BASIC

Gene FOXCUT, Length 333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXCUT-201ENST00000628509 IGHV3-30-3P0DP02 117 aa6.94□□□□□ -1.3
FOXCUT-201ENST00000628509 IGHV3-30-5P0DP03 117 aa6.94□□□□□ -1.3
FOXCUT-201ENST00000628509 LGALS3P17931 250 aaKnown RBP6.94□□□□□ -1.3
FOXCUT-201ENST00000628509 RNASE13Q5GAN3 156 aaKnown RBP6.94□□□□□ -1.3
FOXCUT-201ENST00000628509 CD164L2Q6UWJ8 174 aa6.94□□□□□ -1.3
FOXCUT-201ENST00000628509 WFDC10BQ8IUB3 73 aa6.94□□□□□ -1.3
FOXCUT-201ENST00000628509 C1orf43Q9BWL3 253 aa6.94□□□□□ -1.3
FOXCUT-201ENST00000628509 PRR34Q9NV39 138 aa6.94□□□□□ -1.3
FOXCUT-201ENST00000628509 UQCR10Q9UDW1 63 aa6.94□□□□□ -1.3
FOXCUT-201ENST00000628509 LINC00588Q9Y4M8 146 aa6.94□□□□□ -1.3
FOXCUT-201ENST00000628509 MALP21145 153 aa6.93□□□□□ -1.3
FOXCUT-201ENST00000628509 NMUP48645 174 aa6.93□□□□□ -1.3
FOXCUT-201ENST00000628509 LINC00242Q5T6M2 205 aa6.93□□□□□ -1.3
FOXCUT-201ENST00000628509 UBE2WQ96B02 151 aa6.93□□□□□ -1.3
FOXCUT-201ENST00000628509 TM2D2Q9BX73 214 aa6.93□□□□□ -1.3
FOXCUT-201ENST00000628509 Q9H8V8 135 aa6.93□□□□□ -1.3
FOXCUT-201ENST00000628509 CMYA5Q8N3K9 4069 aa6.92□□□□□ -1.3
FOXCUT-201ENST00000628509 IGHV1-58A0A0C4DH39 117 aa6.92□□□□□ -1.3
FOXCUT-201ENST00000628509 hDV102S1A0JD36 115 aa6.92□□□□□ -1.3
FOXCUT-201ENST00000628509 LINC00587B1AMM8 73 aa6.92□□□□□ -1.3
FOXCUT-201ENST00000628509 COX7A2LO14548 114 aa6.92□□□□□ -1.3
FOXCUT-201ENST00000628509 LEPROTO15243 131 aa6.92□□□□□ -1.3
FOXCUT-201ENST00000628509 PRSS2P07478 247 aa6.92□□□□□ -1.3
FOXCUT-201ENST00000628509 ZNF22P17026 224 aaPredicted RBP6.92□□□□□ -1.3
FOXCUT-201ENST00000628509 CFAP161Q6P656 301 aa6.92□□□□□ -1.3
FOXCUT-201ENST00000628509 SLC25A34Q6PIV7 304 aa6.92□□□□□ -1.3
FOXCUT-201ENST00000628509 DNAH3Q8TD57 4116 aa6.91□□□□□ -1.3
FOXCUT-201ENST00000628509 A0A087WZ39 114 aa6.91□□□□□ -1.3
FOXCUT-201ENST00000628509 TMEM223A0PJW6 202 aa6.91□□□□□ -1.3
FOXCUT-201ENST00000628509 DLEU1O43261 78 aa6.91□□□□□ -1.3
FOXCUT-201ENST00000628509 CXCL5P42830 114 aa6.91□□□□□ -1.3
FOXCUT-201ENST00000628509 LCE3BQ5TA77 95 aa6.91□□□□□ -1.3
FOXCUT-201ENST00000628509 STPG4Q8N801 248 aa6.91□□□□□ -1.3
FOXCUT-201ENST00000628509 CHCHD10Q8WYQ3 142 aaPredicted RBP6.91□□□□□ -1.3
FOXCUT-201ENST00000628509 IBA57-AS1B1ANH7 110 aa6.9□□□□□ -1.3
FOXCUT-201ENST00000628509 COX8AP10176 69 aa6.9□□□□□ -1.3
FOXCUT-201ENST00000628509 XCL1P47992 114 aa6.9□□□□□ -1.3
FOXCUT-201ENST00000628509 HERV-K104P63124 156 aa6.9□□□□□ -1.3
FOXCUT-201ENST00000628509 CIRBPQ14011 172 aaKnown RBP6.9□□□□□ -1.3
FOXCUT-201ENST00000628509 FAM104AQ969W3 186 aa6.9□□□□□ -1.3
FOXCUT-201ENST00000628509 CDKN2A-AS1Q9UH64 79 aa6.9□□□□□ -1.3
FOXCUT-201ENST00000628509 IGHV3OR16-9A0A0B4J2B5 98 aa6.89□□□□□ -1.31
FOXCUT-201ENST00000628509 MYMXA0A1B0GTQ4 84 aa6.89□□□□□ -1.31
FOXCUT-201ENST00000628509 F8WDY8 70 aa6.89□□□□□ -1.31
FOXCUT-201ENST00000628509 J3QQQ9 107 aa6.89□□□□□ -1.31
FOXCUT-201ENST00000628509 ZFAND6Q6FIF0 208 aa6.89□□□□□ -1.31
FOXCUT-201ENST00000628509 CLPSL2Q6UWE3 100 aa6.89□□□□□ -1.31
FOXCUT-201ENST00000628509 BOD1L2Q8IYS8 172 aa6.89□□□□□ -1.31
FOXCUT-201ENST00000628509 COPS9Q8WXC6 57 aa6.89□□□□□ -1.31
FOXCUT-201ENST00000628509 MIEN1Q9BRT3 115 aa6.89□□□□□ -1.31
FOXCUT-201ENST00000628509 FAM229AH3BQW9 127 aa6.88□□□□□ -1.31
FOXCUT-201ENST00000628509 SCGB1D4Q6XE38 83 aa6.88□□□□□ -1.31
FOXCUT-201ENST00000628509 IGKV2D-24A0A075B6R9 120 aa6.87□□□□□ -1.31
FOXCUT-201ENST00000628509 GAGE12HA6NDE8 117 aa6.87□□□□□ -1.31
FOXCUT-201ENST00000628509 ZNF815PA8K554 130 aa6.87□□□□□ -1.31
FOXCUT-201ENST00000628509 SPINK8P0C7L1 97 aa6.87□□□□□ -1.31
FOXCUT-201ENST00000628509 HNRNPA3P51991 378 aaKnown RBP6.87□□□□□ -1.31
FOXCUT-201ENST00000628509 CKS1BP61024 79 aa6.87□□□□□ -1.31
FOXCUT-201ENST00000628509 C6orf226Q5I0X4 101 aa6.87□□□□□ -1.31
FOXCUT-201ENST00000628509 ENHOQ6UWT2 76 aa6.87□□□□□ -1.31
FOXCUT-201ENST00000628509 KRTAP4-12Q9BQ66 201 aa6.87□□□□□ -1.31
FOXCUT-201ENST00000628509 IGLV10-54A0A075B6I4 117 aa6.86□□□□□ -1.31
FOXCUT-201ENST00000628509 A6NJY4 79 aa6.86□□□□□ -1.31
FOXCUT-201ENST00000628509 SMIM1B2RUZ4 78 aa6.86□□□□□ -1.31
FOXCUT-201ENST00000628509 PSCAO43653 123 aa6.86□□□□□ -1.31
FOXCUT-201ENST00000628509 COX6A2Q02221 97 aa6.86□□□□□ -1.31
FOXCUT-201ENST00000628509 C14orf177Q52M58 125 aa6.86□□□□□ -1.31
FOXCUT-201ENST00000628509 ANKRD39Q53RE8 183 aa6.86□□□□□ -1.31
FOXCUT-201ENST00000628509 C5orf38Q86SI9 138 aa6.86□□□□□ -1.31
FOXCUT-201ENST00000628509 Q8IZM0 81 aa6.86□□□□□ -1.31
FOXCUT-201ENST00000628509 COX7B2Q8TF08 81 aa6.86□□□□□ -1.31
FOXCUT-201ENST00000628509 C14orf144Q96I85 54 aa6.86□□□□□ -1.31
FOXCUT-201ENST00000628509 IGLV5-39A0A0G2JS06 123 aa6.85□□□□□ -1.31
FOXCUT-201ENST00000628509 TMEM238C9JI98 176 aa6.85□□□□□ -1.31
FOXCUT-201ENST00000628509 ZNF561-AS1K7EIQ3 104 aa6.85□□□□□ -1.31
FOXCUT-201ENST00000628509 DDTP30046 118 aa6.85□□□□□ -1.31
FOXCUT-201ENST00000628509 MAJINQ3KP22 176 aa6.85□□□□□ -1.31
FOXCUT-201ENST00000628509 CASC10Q5T4H9 136 aa6.85□□□□□ -1.31
FOXCUT-201ENST00000628509 CDPF1Q6NVV7 123 aa6.85□□□□□ -1.31
FOXCUT-201ENST00000628509 Q6ZVH6 145 aa6.85□□□□□ -1.31
FOXCUT-201ENST00000628509 PRO1933Q9H354 126 aa6.85□□□□□ -1.31
FOXCUT-201ENST00000628509 TOMM7Q9P0U1 55 aa6.85□□□□□ -1.31
FOXCUT-201ENST00000628509 HIGD1BQ9P298 99 aa6.85□□□□□ -1.31
FOXCUT-201ENST00000628509 NDUFA12Q9UI09 145 aa6.85□□□□□ -1.31
FOXCUT-201ENST00000628509 TENM3Q9P273 2699 aa6.85□□□□□ -1.31
FOXCUT-201ENST00000628509 IGHV3-64A0A075B6Q5 118 aa6.84□□□□□ -1.31
FOXCUT-201ENST00000628509 NBDYA0A0U1RRE5 68 aa6.84□□□□□ -1.31
FOXCUT-201ENST00000628509 M0R143 59 aa6.84□□□□□ -1.31
FOXCUT-201ENST00000628509 NDUFA1O15239 70 aa6.84□□□□□ -1.31
FOXCUT-201ENST00000628509 FOXI1Q12951 378 aa6.84□□□□□ -1.31
FOXCUT-201ENST00000628509 ORAOV1Q8WV07 137 aa6.84□□□□□ -1.31
FOXCUT-201ENST00000628509 Q9HAA7 133 aa6.84□□□□□ -1.31
FOXCUT-201ENST00000628509 PKIGQ9Y2B9 76 aa6.84□□□□□ -1.31
FOXCUT-201ENST00000628509 TIMM17BO60830 172 aa6.83□□□□□ -1.32
FOXCUT-201ENST00000628509 TAL2Q16559 108 aa6.83□□□□□ -1.32
FOXCUT-201ENST00000628509 IGKV2D-26A0A0A0MRZ7 120 aa6.82□□□□□ -1.32
FOXCUT-201ENST00000628509 TMEM238LA0A1B0GVL6 79 aa6.82□□□□□ -1.32
FOXCUT-201ENST00000628509 PCP4L1A6NKN8 68 aa6.82□□□□□ -1.32
FOXCUT-201ENST00000628509 SPAG11BQ08648 103 aa6.82□□□□□ -1.32
FOXCUT-201ENST00000628509 SRSF9Q13242 221 aaKnown RBP eCLIP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms