RNA–Protein interactions for RNA: ENST00000627501.2

SOX2-OT-242, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 775 nt, Biotype sense overlapping.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-242ENST00000627501 IGLV4-3A0A075B6K6 122 aa8.8□□□□□ -1
SOX2-OT-242ENST00000627501 HNRNPA3P51991 378 aaKnown RBP8.8□□□□□ -1
SOX2-OT-242ENST00000627501 CNBPP62633 177 aaKnown RBP8.8□□□□□ -1
SOX2-OT-242ENST00000627501 CBLN2Q8IUK8 224 aa8.8□□□□□ -1
SOX2-OT-242ENST00000627501 CYSLTR1Q9Y271 337 aa8.8□□□□□ -1
SOX2-OT-242ENST00000627501 TRAPPC1Q9Y5R8 145 aa8.8□□□□□ -1
SOX2-OT-242ENST00000627501 LINC01546A6NGU7 62 aa8.79□□□□□ -1
SOX2-OT-242ENST00000627501 CFAP161Q6P656 301 aa8.79□□□□□ -1
SOX2-OT-242ENST00000627501 PRSS3P2Q8NHM4 247 aa8.79□□□□□ -1
SOX2-OT-242ENST00000627501 LINC00526Q96FQ7 95 aa8.79□□□□□ -1
SOX2-OT-242ENST00000627501 GVQW2A0A096LPI5 108 aaPredicted RBP8.78□□□□□ -1
SOX2-OT-242ENST00000627501 IFITM10A6NMD0 228 aa8.78□□□□□ -1
SOX2-OT-242ENST00000627501 IGIPA6NJ69 53 aa8.77□□□□□ -1.01
SOX2-OT-242ENST00000627501 TMEM141Q96I45 108 aa8.77□□□□□ -1.01
SOX2-OT-242ENST00000627501 SMCO4Q9NRQ5 59 aa8.77□□□□□ -1.01
SOX2-OT-242ENST00000627501 LRP1Q07954 4544 aaKnown RBP8.77□□□□□ -1.01
SOX2-OT-242ENST00000627501 IGHV1-58A0A0C4DH39 117 aa8.76□□□□□ -1.01
SOX2-OT-242ENST00000627501 COX7A2LO14548 114 aa8.76□□□□□ -1.01
SOX2-OT-242ENST00000627501 ZC2HC1BQ5TFG8 222 aa8.76□□□□□ -1.01
SOX2-OT-242ENST00000627501 LINC00173Q6ZV60 143 aa8.76□□□□□ -1.01
SOX2-OT-242ENST00000627501 TOMM6Q96B49 74 aa8.76□□□□□ -1.01
SOX2-OT-242ENST00000627501 AP5S1Q9NUS5 200 aa8.76□□□□□ -1.01
SOX2-OT-242ENST00000627501 IGHV3-64A0A075B6Q5 118 aa8.75□□□□□ -1.01
SOX2-OT-242ENST00000627501 RPL37AP61513 92 aaKnown RBP8.75□□□□□ -1.01
SOX2-OT-242ENST00000627501 CIRBPQ14011 172 aaKnown RBP8.75□□□□□ -1.01
SOX2-OT-242ENST00000627501 FA2HQ7L5A8 372 aa8.75□□□□□ -1.01
SOX2-OT-242ENST00000627501 C5orf38Q86SI9 138 aa8.75□□□□□ -1.01
SOX2-OT-242ENST00000627501 C18orf32Q8TCD1 76 aa8.75□□□□□ -1.01
SOX2-OT-242ENST00000627501 AMELXQ99217 191 aa8.75□□□□□ -1.01
SOX2-OT-242ENST00000627501 A0A087WYN8 130 aa8.74□□□□□ -1.01
SOX2-OT-242ENST00000627501 IGHV3OR16-9A0A0B4J2B5 98 aa8.74□□□□□ -1.01
SOX2-OT-242ENST00000627501 NPSP0C0P6 89 aa8.74□□□□□ -1.01
SOX2-OT-242ENST00000627501 COX6A2Q02221 97 aa8.74□□□□□ -1.01
SOX2-OT-242ENST00000627501 TEX43Q6ZNM6 134 aa8.74□□□□□ -1.01
SOX2-OT-242ENST00000627501 URB1-AS1Q96HZ7 61 aa8.74□□□□□ -1.01
SOX2-OT-242ENST00000627501 TIMM17AQ99595 171 aa8.74□□□□□ -1.01
SOX2-OT-242ENST00000627501 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.73□□□□□ -1.01
SOX2-OT-242ENST00000627501 MALP21145 153 aa8.73□□□□□ -1.01
SOX2-OT-242ENST00000627501 G0S2P27469 103 aa8.73□□□□□ -1.01
SOX2-OT-242ENST00000627501 UBE2D1P51668 147 aa8.73□□□□□ -1.01
SOX2-OT-242ENST00000627501 LINC00242Q5T6M2 205 aa8.73□□□□□ -1.01
SOX2-OT-242ENST00000627501 Q6ZN92 141 aa8.73□□□□□ -1.01
SOX2-OT-242ENST00000627501 SPACA4Q8TDM5 124 aa8.73□□□□□ -1.01
SOX2-OT-242ENST00000627501 IGKV2-24A0A0C4DH68 120 aa8.72□□□□□ -1.01
SOX2-OT-242ENST00000627501 J3QL48 77 aa8.72□□□□□ -1.01
SOX2-OT-242ENST00000627501 SCGB3A1Q96QR1 104 aa8.72□□□□□ -1.01
SOX2-OT-242ENST00000627501 C2orf88Q9BSF0 95 aa8.72□□□□□ -1.01
SOX2-OT-242ENST00000627501 VCX2Q9H322 139 aa8.72□□□□□ -1.01
SOX2-OT-242ENST00000627501 A0A096LNI7 61 aa8.71□□□□□ -1.02
SOX2-OT-242ENST00000627501 A0A096LNJ9 63 aa8.71□□□□□ -1.02
SOX2-OT-242ENST00000627501 KRTAP29-1A8MX34 341 aaPredicted RBP8.71□□□□□ -1.02
SOX2-OT-242ENST00000627501 ERASQ7Z444 233 aa8.71□□□□□ -1.02
SOX2-OT-242ENST00000627501 IGLV4-69A0A075B6H9 119 aa8.7□□□□□ -1.02
SOX2-OT-242ENST00000627501 ZNF561-AS1K7EIQ3 104 aa8.7□□□□□ -1.02
SOX2-OT-242ENST00000627501 LINC00614P0C842 121 aa8.7□□□□□ -1.02
SOX2-OT-242ENST00000627501 A0A087WZ39 114 aa8.69□□□□□ -1.02
SOX2-OT-242ENST00000627501 LINC01549A6NIU2 74 aa8.69□□□□□ -1.02
SOX2-OT-242ENST00000627501 APOMO95445 188 aa8.69□□□□□ -1.02
SOX2-OT-242ENST00000627501 SPAG11BQ08648 103 aa8.69□□□□□ -1.02
SOX2-OT-242ENST00000627501 MAJINQ3KP22 176 aa8.69□□□□□ -1.02
SOX2-OT-242ENST00000627501 PAPPA-AS1Q5QFB9 102 aa8.69□□□□□ -1.02
SOX2-OT-242ENST00000627501 FAM19A3Q7Z5A8 133 aa8.69□□□□□ -1.02
SOX2-OT-242ENST00000627501 DPH3Q96FX2 82 aa8.69□□□□□ -1.02
SOX2-OT-242ENST00000627501 COLCA2A8K830 154 aa8.68□□□□□ -1.02
SOX2-OT-242ENST00000627501 SYCNQ0VAF6 134 aa8.68□□□□□ -1.02
SOX2-OT-242ENST00000627501 PMCHL1Q16048 86 aa8.68□□□□□ -1.02
SOX2-OT-242ENST00000627501 OR10D4PQ8NGN7 298 aa8.68□□□□□ -1.02
SOX2-OT-242ENST00000627501 ORAOV1Q8WV07 137 aa8.68□□□□□ -1.02
SOX2-OT-242ENST00000627501 CARD19Q96LW7 228 aa8.68□□□□□ -1.02
SOX2-OT-242ENST00000627501 FAT3Q8TDW7 4589 aa8.68□□□□□ -1.02
SOX2-OT-242ENST00000627501 PKHD1L1Q86WI1 4243 aa8.67□□□□□ -1.02
SOX2-OT-242ENST00000627501 TRGC2P03986 189 aa8.67□□□□□ -1.02
SOX2-OT-242ENST00000627501 PLAC8Q9NZF1 115 aa8.67□□□□□ -1.02
SOX2-OT-242ENST00000627501 A0A0J9YXV3 536 aa8.66□□□□□ -1.02
SOX2-OT-242ENST00000627501 SCO1O75880 301 aa8.66□□□□□ -1.02
SOX2-OT-242ENST00000627501 RAB5BP61020 215 aa8.66□□□□□ -1.02
SOX2-OT-242ENST00000627501 Q6ZRU5 148 aa8.66□□□□□ -1.02
SOX2-OT-242ENST00000627501 C2orf48Q96LS8 159 aa8.66□□□□□ -1.02
SOX2-OT-242ENST00000627501 CAMK2N2Q96S95 79 aa8.66□□□□□ -1.02
SOX2-OT-242ENST00000627501 HBDP02042 147 aa8.65□□□□□ -1.02
SOX2-OT-242ENST00000627501 PDZD11Q5EBL8 140 aa8.65□□□□□ -1.02
SOX2-OT-242ENST00000627501 STPG4Q8N801 248 aa8.65□□□□□ -1.02
SOX2-OT-242ENST00000627501 CST9LQ9H4G1 147 aa8.65□□□□□ -1.02
SOX2-OT-242ENST00000627501 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.64□□□□□ -1.03
SOX2-OT-242ENST00000627501 HERVK_113P63121 156 aa8.64□□□□□ -1.03
SOX2-OT-242ENST00000627501 KIAA0087Q14695 138 aa8.64□□□□□ -1.03
SOX2-OT-242ENST00000627501 LINC01561Q8N1V8 128 aa8.64□□□□□ -1.03
SOX2-OT-242ENST00000627501 CDKN2A-AS1Q9UH64 79 aa8.64□□□□□ -1.03
SOX2-OT-242ENST00000627501 SEC11AP67812 179 aa8.63□□□□□ -1.03
SOX2-OT-242ENST00000627501 PMVKQ15126 192 aa8.63□□□□□ -1.03
SOX2-OT-242ENST00000627501 CHCHD1Q96BP2 118 aaKnown RBP8.63□□□□□ -1.03
SOX2-OT-242ENST00000627501 GEMIN7Q9H840 131 aaKnown RBP8.63□□□□□ -1.03
SOX2-OT-242ENST00000627501 TINCRA0A1B0GVN0 87 aa8.62□□□□□ -1.03
SOX2-OT-242ENST00000627501 C10orf25Q5T742 122 aa8.62□□□□□ -1.03
SOX2-OT-242ENST00000627501 LCE2AQ5TA79 106 aaPredicted RBP8.62□□□□□ -1.03
SOX2-OT-242ENST00000627501 IGLV5-45A0A087WSX0 123 aa8.61□□□□□ -1.03
SOX2-OT-242ENST00000627501 F8WDY8 70 aa8.61□□□□□ -1.03
SOX2-OT-242ENST00000627501 LINC00310P59036 64 aa8.61□□□□□ -1.03
SOX2-OT-242ENST00000627501 UNQ6190/PRO20217Q6UXQ8 127 aa8.61□□□□□ -1.03
SOX2-OT-242ENST00000627501 BAGE3Q86Y29 109 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms