RNA–Protein interactions for RNA: ENST00000625402.1

SCARNA4-202, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 129 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-202ENST00000625402 C9orf153Q5TBE3 101 aa-0.27□□□□□ -2.45
SCARNA4-202ENST00000625402 EP300Q09472 2414 aaPredicted RBP-0.27□□□□□ -2.45
SCARNA4-202ENST00000625402 KMT2CQ8NEZ4 4911 aaKnown RBP-0.27□□□□□ -2.45
SCARNA4-202ENST00000625402 MAP1AP78559 2803 aaPredicted RBP-0.28□□□□□ -2.45
SCARNA4-202ENST00000625402 TRBV6-1A0A0K0K1D8 114 aa-0.28□□□□□ -2.45
SCARNA4-202ENST00000625402 SPRR2BP35325 72 aa-0.28□□□□□ -2.45
SCARNA4-202ENST00000625402 CDC42SE2Q9NRR3 84 aa-0.28□□□□□ -2.45
SCARNA4-202ENST00000625402 NEBP20929 6669 aa-0.28□□□□□ -2.45
SCARNA4-202ENST00000625402 LAMA5O15230 3695 aa-0.28□□□□□ -2.45
SCARNA4-202ENST00000625402 BTAF1O14981 1849 aa-0.29□□□□□ -2.46
SCARNA4-202ENST00000625402 COL6A3P12111 3177 aa-0.29□□□□□ -2.46
SCARNA4-202ENST00000625402 FXYD6-FXYD2A0A087WZ82 144 aa-0.29□□□□□ -2.46
SCARNA4-202ENST00000625402 EFCAB10A6NFE3 127 aa-0.29□□□□□ -2.46
SCARNA4-202ENST00000625402 SNAPC5O75971 98 aa-0.29□□□□□ -2.46
SCARNA4-202ENST00000625402 APOC3P02656 99 aa-0.29□□□□□ -2.46
SCARNA4-202ENST00000625402 IGLC1P0CG04 106 aa-0.29□□□□□ -2.46
SCARNA4-202ENST00000625402 SPRR4Q96PI1 79 aa-0.29□□□□□ -2.46
SCARNA4-202ENST00000625402 HERC2O95714 4834 aa-0.29□□□□□ -2.46
SCARNA4-202ENST00000625402 NSD3Q9BZ95 1437 aa-0.3□□□□□ -2.46
SCARNA4-202ENST00000625402 MXRA5Q9NR99 2828 aa-0.3□□□□□ -2.46
SCARNA4-202ENST00000625402 NBPF19A0A087WUL8 3843 aa-0.3□□□□□ -2.46
SCARNA4-202ENST00000625402 LOC285095A0A1B0GVY8 99 aa-0.3□□□□□ -2.46
SCARNA4-202ENST00000625402 DCDP81605 110 aaKnown RBP-0.3□□□□□ -2.46
SCARNA4-202ENST00000625402 KRTAP19-8Q3LI54 63 aa-0.3□□□□□ -2.46
SCARNA4-202ENST00000625402 MYOZ3Q8TDC0 251 aa-0.3□□□□□ -2.46
SCARNA4-202ENST00000625402 NXT2Q9NPJ8 142 aaKnown RBP-0.3□□□□□ -2.46
SCARNA4-202ENST00000625402 PCLOQ9Y6V0 5065 aa-0.3□□□□□ -2.46
SCARNA4-202ENST00000625402 LRP1BQ9NZR2 4599 aa-0.3□□□□□ -2.46
SCARNA4-202ENST00000625402 KTN1Q86UP2 1357 aaKnown RBP-0.31□□□□□ -2.46
SCARNA4-202ENST00000625402 TGP01266 2768 aa-0.31□□□□□ -2.46
SCARNA4-202ENST00000625402 UBE2L5PA0A1B0GUS4 154 aa-0.31□□□□□ -2.46
SCARNA4-202ENST00000625402 UBE2L3P68036 154 aaKnown RBP-0.31□□□□□ -2.46
SCARNA4-202ENST00000625402 IER3IP1Q9Y5U9 82 aa-0.31□□□□□ -2.46
SCARNA4-202ENST00000625402 SETD2Q9BYW2 2564 aaPredicted RBP-0.31□□□□□ -2.46
SCARNA4-202ENST00000625402 PAPPAQ13219 1627 aa-0.31□□□□□ -2.46
SCARNA4-202ENST00000625402 SHROOM2Q13796 1616 aa-0.31□□□□□ -2.46
SCARNA4-202ENST00000625402 DOPEY1Q5JWR5 2465 aa-0.31□□□□□ -2.46
SCARNA4-202ENST00000625402 DNAJC13O75165 2243 aa-0.32□□□□□ -2.46
SCARNA4-202ENST00000625402 PRKDCP78527 4128 aaKnown RBP-0.32□□□□□ -2.46
SCARNA4-202ENST00000625402 FLGP20930 4061 aaPredicted RBP-0.32□□□□□ -2.46
SCARNA4-202ENST00000625402 LINC00587B1AMM8 73 aa-0.32□□□□□ -2.46
SCARNA4-202ENST00000625402 CORTO00230 105 aa-0.32□□□□□ -2.46
SCARNA4-202ENST00000625402 SPRR1BP22528 89 aa-0.32□□□□□ -2.46
SCARNA4-202ENST00000625402 MT4P47944 62 aa-0.32□□□□□ -2.46
SCARNA4-202ENST00000625402 GNG11P61952 73 aa-0.32□□□□□ -2.46
SCARNA4-202ENST00000625402 PIGYQ3MUY2 71 aa-0.32□□□□□ -2.46
SCARNA4-202ENST00000625402 FAM223AQ8IWN6 122 aa-0.32□□□□□ -2.46
SCARNA4-202ENST00000625402 ARL2-SNX15V9GYD0 113 aa-0.32□□□□□ -2.46
SCARNA4-202ENST00000625402 PKHD1P08F94 4074 aa-0.32□□□□□ -2.46
SCARNA4-202ENST00000625402 TCHHQ07283 1943 aa-0.32□□□□□ -2.46
SCARNA4-202ENST00000625402 HMGXB3Q12766 1538 aa-0.33□□□□□ -2.46
SCARNA4-202ENST00000625402 EPG5Q9HCE0 2579 aa-0.33□□□□□ -2.46
SCARNA4-202ENST00000625402 HIVEP1P15822 2718 aa-0.33□□□□□ -2.46
SCARNA4-202ENST00000625402 SHANK2Q9UPX8 1470 aa-0.33□□□□□ -2.46
SCARNA4-202ENST00000625402 ZFHX3Q15911 3703 aa-0.33□□□□□ -2.46
SCARNA4-202ENST00000625402 FAM24AA6NFZ4 105 aa-0.33□□□□□ -2.46
SCARNA4-202ENST00000625402 LOC730098B7Z3J9 87 aa-0.33□□□□□ -2.46
SCARNA4-202ENST00000625402 KRTAP20-2Q3LI61 65 aa-0.33□□□□□ -2.46
SCARNA4-202ENST00000625402 C10orf113Q5VZT2 155 aa-0.33□□□□□ -2.46
SCARNA4-202ENST00000625402 SFTA2Q6UW10 78 aa-0.33□□□□□ -2.46
SCARNA4-202ENST00000625402 TMEM263Q8WUH6 116 aaKnown RBP-0.33□□□□□ -2.46
SCARNA4-202ENST00000625402 ARHGEF5Q12774 1597 aa-0.33□□□□□ -2.46
SCARNA4-202ENST00000625402 NALCNQ8IZF0 1738 aa-0.33□□□□□ -2.46
SCARNA4-202ENST00000625402 HYDINQ4G0P3 5121 aa-0.33□□□□□ -2.46
SCARNA4-202ENST00000625402 ITPR3Q14573 2671 aa-0.33□□□□□ -2.46
SCARNA4-202ENST00000625402 MYOM1P52179 1685 aa-0.33□□□□□ -2.46
SCARNA4-202ENST00000625402 F6UZH7 168 aa-0.34□□□□□ -2.46
SCARNA4-202ENST00000625402 SPINK4O60575 86 aa-0.34□□□□□ -2.46
SCARNA4-202ENST00000625402 MGPP08493 103 aa-0.34□□□□□ -2.46
SCARNA4-202ENST00000625402 Q0VG73 95 aa-0.34□□□□□ -2.46
SCARNA4-202ENST00000625402 DEFB123Q8N688 67 aa-0.34□□□□□ -2.46
SCARNA4-202ENST00000625402 FAM167A-AS1Q96KT0 104 aa-0.34□□□□□ -2.46
SCARNA4-202ENST00000625402 PCNX1Q96RV3 2341 aa-0.34□□□□□ -2.46
SCARNA4-202ENST00000625402 MANBALQ9NQG1 85 aa-0.34□□□□□ -2.46
SCARNA4-202ENST00000625402 SPG11Q96JI7 2443 aa-0.34□□□□□ -2.46
SCARNA4-202ENST00000625402 KDM5AP29375 1690 aaKnown RBP-0.34□□□□□ -2.46
SCARNA4-202ENST00000625402 CUL7Q14999 1698 aa-0.34□□□□□ -2.46
SCARNA4-202ENST00000625402 MYOM2P54296 1465 aa-0.35□□□□□ -2.46
SCARNA4-202ENST00000625402 SMG6Q86US8 1419 aaKnown RBP-0.35□□□□□ -2.47
SCARNA4-202ENST00000625402 SCAPERQ9BY12 1400 aa-0.35□□□□□ -2.47
SCARNA4-202ENST00000625402 SVEP1Q4LDE5 3571 aa-0.35□□□□□ -2.47
SCARNA4-202ENST00000625402 UBR4Q5T4S7 5183 aa-0.35□□□□□ -2.47
SCARNA4-202ENST00000625402 K7EQZ3 153 aa-0.35□□□□□ -2.47
SCARNA4-202ENST00000625402 S100A1P23297 94 aa-0.35□□□□□ -2.47
SCARNA4-202ENST00000625402 SPRR2AP35326 72 aa-0.35□□□□□ -2.47
SCARNA4-202ENST00000625402 PPP3R1P63098 170 aa-0.35□□□□□ -2.47
SCARNA4-202ENST00000625402 C2orf88Q9BSF0 95 aa-0.35□□□□□ -2.47
SCARNA4-202ENST00000625402 UQCR10Q9UDW1 63 aa-0.35□□□□□ -2.47
SCARNA4-202ENST00000625402 RAPGEF6Q8TEU7 1601 aa-0.35□□□□□ -2.47
SCARNA4-202ENST00000625402 TSC2P49815 1807 aa-0.36□□□□□ -2.47
SCARNA4-202ENST00000625402 TET3O43151 1660 aa-0.36□□□□□ -2.47
SCARNA4-202ENST00000625402 FASNP49327 2511 aaKnown RBP-0.36□□□□□ -2.47
SCARNA4-202ENST00000625402 LINC00959A0A1B0GUT2 108 aa-0.36□□□□□ -2.47
SCARNA4-202ENST00000625402 COX6B1P14854 86 aa-0.36□□□□□ -2.47
SCARNA4-202ENST00000625402 GNG4P50150 75 aa-0.36□□□□□ -2.47
SCARNA4-202ENST00000625402 UBE2D3P61077 147 aa-0.36□□□□□ -2.47
SCARNA4-202ENST00000625402 UBE2D2P62837 147 aa-0.36□□□□□ -2.47
SCARNA4-202ENST00000625402 UBA52P62987 128 aaKnown RBP-0.36□□□□□ -2.47
SCARNA4-202ENST00000625402 LCN9Q8WX39 176 aa-0.36□□□□□ -2.47
SCARNA4-202ENST00000625402 FAIMQ9NVQ4 179 aa-0.36□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms