RNA–Protein interactions for RNA: ENST00000625171.3

LINC00963-220, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 830 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-220ENST00000625171 LINC00588Q9Y4M8 146 aa7.99□□□□□ -1.13
LINC00963-220ENST00000625171 TRAV13-1A0A0B4J241 112 aa7.98□□□□□ -1.13
LINC00963-220ENST00000625171 IGLV5-39A0A0G2JS06 123 aa7.98□□□□□ -1.13
LINC00963-220ENST00000625171 SIVA1O15304 175 aa7.98□□□□□ -1.13
LINC00963-220ENST00000625171 ANGP03950 147 aaKnown RBP7.98□□□□□ -1.13
LINC00963-220ENST00000625171 REG3AQ06141 175 aa7.98□□□□□ -1.13
LINC00963-220ENST00000625171 TMEM170BQ5T4T1 132 aa7.98□□□□□ -1.13
LINC00963-220ENST00000625171 WFDC10BQ8IUB3 73 aa7.98□□□□□ -1.13
LINC00963-220ENST00000625171 KRTAP17-1Q9BYP8 105 aa7.98□□□□□ -1.13
LINC00963-220ENST00000625171 CDKN2A-AS1Q9UH64 79 aa7.98□□□□□ -1.13
LINC00963-220ENST00000625171 A0A087WZ39 114 aa7.97□□□□□ -1.13
LINC00963-220ENST00000625171 IGHV1-58A0A0C4DH39 117 aa7.97□□□□□ -1.13
LINC00963-220ENST00000625171 COX6A2Q02221 97 aa7.97□□□□□ -1.13
LINC00963-220ENST00000625171 MIAQ16674 131 aa7.97□□□□□ -1.13
LINC00963-220ENST00000625171 SLC25A34Q6PIV7 304 aa7.97□□□□□ -1.13
LINC00963-220ENST00000625171 CD164L2Q6UWJ8 174 aa7.97□□□□□ -1.13
LINC00963-220ENST00000625171 LINC00269Q8N2A0 174 aa7.97□□□□□ -1.13
LINC00963-220ENST00000625171 PLEKHB2Q96CS7 222 aa7.97□□□□□ -1.13
LINC00963-220ENST00000625171 STARD9Q9P2P6 4700 aa7.96□□□□□ -1.14
LINC00963-220ENST00000625171 IGKV2D-26A0A0A0MRZ7 120 aa7.96□□□□□ -1.14
LINC00963-220ENST00000625171 LEPROTO15243 131 aa7.96□□□□□ -1.14
LINC00963-220ENST00000625171 ENHOQ6UWT2 76 aa7.96□□□□□ -1.14
LINC00963-220ENST00000625171 LINC00469Q8N7U9 141 aa7.96□□□□□ -1.14
LINC00963-220ENST00000625171 C10orf126Q8N4M7 172 aa7.95□□□□□ -1.14
LINC00963-220ENST00000625171 C14orf144Q96I85 54 aa7.95□□□□□ -1.14
LINC00963-220ENST00000625171 IBA57-AS1B1ANH7 110 aa7.94□□□□□ -1.14
LINC00963-220ENST00000625171 IGHV3-30-3P0DP02 117 aa7.94□□□□□ -1.14
LINC00963-220ENST00000625171 DDTP30046 118 aa7.94□□□□□ -1.14
LINC00963-220ENST00000625171 NMUP48645 174 aa7.94□□□□□ -1.14
LINC00963-220ENST00000625171 PRO1933Q9H354 126 aa7.94□□□□□ -1.14
LINC00963-220ENST00000625171 HIGD1BQ9P298 99 aa7.94□□□□□ -1.14
LINC00963-220ENST00000625171 KLK12Q9UKR0 248 aa7.94□□□□□ -1.14
LINC00963-220ENST00000625171 SMIM1B2RUZ4 78 aa7.93□□□□□ -1.14
LINC00963-220ENST00000625171 J3QQQ9 107 aa7.93□□□□□ -1.14
LINC00963-220ENST00000625171 ZFAND6Q6FIF0 208 aa7.93□□□□□ -1.14
LINC00963-220ENST00000625171 Q8N3U1 123 aa7.93□□□□□ -1.14
LINC00963-220ENST00000625171 CHCHD10Q8WYQ3 142 aaPredicted RBP7.93□□□□□ -1.14
LINC00963-220ENST00000625171 Q9H8V8 135 aa7.93□□□□□ -1.14
LINC00963-220ENST00000625171 TRAV8-3A0A0A6YYJ7 113 aa7.92□□□□□ -1.14
LINC00963-220ENST00000625171 MYMXA0A1B0GTQ4 84 aa7.92□□□□□ -1.14
LINC00963-220ENST00000625171 IGHV3-30P01768 117 aa7.92□□□□□ -1.14
LINC00963-220ENST00000625171 IGHV3-33P01772 117 aa7.92□□□□□ -1.14
LINC00963-220ENST00000625171 IGHV3-30-5P0DP03 117 aa7.92□□□□□ -1.14
LINC00963-220ENST00000625171 KRTAP26-1Q6PEX3 210 aa7.92□□□□□ -1.14
LINC00963-220ENST00000625171 SFTA2Q6UW10 78 aa7.92□□□□□ -1.14
LINC00963-220ENST00000625171 PCP2Q8IVA1 136 aa7.92□□□□□ -1.14
LINC00963-220ENST00000625171 CRPP02741 224 aa7.91□□□□□ -1.14
LINC00963-220ENST00000625171 FOXI1Q12951 378 aa7.91□□□□□ -1.14
LINC00963-220ENST00000625171 LGALS3P17931 250 aaKnown RBP7.9□□□□□ -1.14
LINC00963-220ENST00000625171 MAPKAPK5-AS1Q8N8E1 139 aa7.9□□□□□ -1.14
LINC00963-220ENST00000625171 UBE2WQ96B02 151 aa7.9□□□□□ -1.14
LINC00963-220ENST00000625171 HYDINQ4G0P3 5121 aa7.89□□□□□ -1.15
LINC00963-220ENST00000625171 IGKV3OR2-268A0A0C4DH90 116 aa7.89□□□□□ -1.15
LINC00963-220ENST00000625171 COX7A2LO14548 114 aa7.89□□□□□ -1.15
LINC00963-220ENST00000625171 SPINK8P0C7L1 97 aa7.89□□□□□ -1.15
LINC00963-220ENST00000625171 XCL1P47992 114 aa7.89□□□□□ -1.15
LINC00963-220ENST00000625171 TSPEAR-AS2P59090 65 aa7.89□□□□□ -1.15
LINC00963-220ENST00000625171 C2orf91Q6ZV80 131 aa7.89□□□□□ -1.15
LINC00963-220ENST00000625171 Q8IZM0 81 aa7.89□□□□□ -1.15
LINC00963-220ENST00000625171 COX11Q9Y6N1 276 aa7.89□□□□□ -1.15
LINC00963-220ENST00000625171 IGHV3-64A0A075B6Q5 118 aa7.88□□□□□ -1.15
LINC00963-220ENST00000625171 NDUFA1O15239 70 aa7.88□□□□□ -1.15
LINC00963-220ENST00000625171 HNRNPA3P51991 378 aaKnown RBP7.88□□□□□ -1.15
LINC00963-220ENST00000625171 HERV-K104P63124 156 aa7.88□□□□□ -1.15
LINC00963-220ENST00000625171 TAL2Q16559 108 aa7.88□□□□□ -1.15
LINC00963-220ENST00000625171 RMI2Q96E14 147 aa7.88□□□□□ -1.15
LINC00963-220ENST00000625171 ZNF815PA8K554 130 aa7.87□□□□□ -1.15
LINC00963-220ENST00000625171 F8WDY8 70 aa7.87□□□□□ -1.15
LINC00963-220ENST00000625171 TIMM17BO60830 172 aa7.87□□□□□ -1.15
LINC00963-220ENST00000625171 APOMO95445 188 aa7.87□□□□□ -1.15
LINC00963-220ENST00000625171 CLPSL2Q6UWE3 100 aa7.87□□□□□ -1.15
LINC00963-220ENST00000625171 C5orf38Q86SI9 138 aa7.87□□□□□ -1.15
LINC00963-220ENST00000625171 ZNF625Q96I27 306 aaPredicted RBP7.87□□□□□ -1.15
LINC00963-220ENST00000625171 C1orf43Q9BWL3 253 aa7.87□□□□□ -1.15
LINC00963-220ENST00000625171 TTTY13Q9BZ97 58 aa7.87□□□□□ -1.15
LINC00963-220ENST00000625171 SPANXB1Q9NS25 103 aaPredicted RBP7.87□□□□□ -1.15
LINC00963-220ENST00000625171 NDUFA12Q9UI09 145 aa7.87□□□□□ -1.15
LINC00963-220ENST00000625171 GAGE12HA6NDE8 117 aa7.86□□□□□ -1.15
LINC00963-220ENST00000625171 PCP4L1A6NKN8 68 aa7.86□□□□□ -1.15
LINC00963-220ENST00000625171 CXCL5P42830 114 aa7.86□□□□□ -1.15
LINC00963-220ENST00000625171 KIAA0087Q14695 138 aa7.86□□□□□ -1.15
LINC00963-220ENST00000625171 TTC32Q5I0X7 151 aa7.86□□□□□ -1.15
LINC00963-220ENST00000625171 Q6ZVH6 145 aa7.86□□□□□ -1.15
LINC00963-220ENST00000625171 UBE2DNLQ8IWF7 75 aa7.86□□□□□ -1.15
LINC00963-220ENST00000625171 COX7B2Q8TF08 81 aa7.86□□□□□ -1.15
LINC00963-220ENST00000625171 IGLV10-54A0A075B6I4 117 aa7.85□□□□□ -1.15
LINC00963-220ENST00000625171 LINC00587B1AMM8 73 aa7.85□□□□□ -1.15
LINC00963-220ENST00000625171 PPDPFQ9H3Y8 114 aa7.85□□□□□ -1.15
LINC00963-220ENST00000625171 A0A0J9YXY3 114 aa7.84□□□□□ -1.15
LINC00963-220ENST00000625171 MALP21145 153 aa7.84□□□□□ -1.15
LINC00963-220ENST00000625171 PTTG1IPP53801 180 aa7.84□□□□□ -1.15
LINC00963-220ENST00000625171 CTAG1AP78358 180 aa7.84□□□□□ -1.15
LINC00963-220ENST00000625171 TP73-AS1Q9UF72 201 aa7.84□□□□□ -1.15
LINC00963-220ENST00000625171 PLECQ15149 4684 aaKnown RBP7.83□□□□□ -1.16
LINC00963-220ENST00000625171 HSD52Q0P140 79 aa7.83□□□□□ -1.16
LINC00963-220ENST00000625171 C6orf226Q5I0X4 101 aa7.83□□□□□ -1.16
LINC00963-220ENST00000625171 CFAP161Q6P656 301 aa7.83□□□□□ -1.16
LINC00963-220ENST00000625171 TM2D2Q9BX73 214 aa7.83□□□□□ -1.16
LINC00963-220ENST00000625171 ALMS1Q8TCU4 4167 aa7.82□□□□□ -1.16
LINC00963-220ENST00000625171 FRAS1Q86XX4 4008 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms