RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 PMAIP1Q13794 54 aa6.56□□□□□ -1.36
VCL-206ENST00000623461 Q8N6K4 173 aa6.56□□□□□ -1.36
VCL-206ENST00000623461 A0A087WVE0 104 aa6.55□□□□□ -1.36
VCL-206ENST00000623461 HILS1P60008 231 aa6.55□□□□□ -1.36
VCL-206ENST00000623461 TRBV10-3A0A0K0K1G6 114 aa6.55□□□□□ -1.36
VCL-206ENST00000623461 IGKV4-1P06312 121 aa6.55□□□□□ -1.36
VCL-206ENST00000623461 BCE1O60756 84 aa6.55□□□□□ -1.36
VCL-206ENST00000623461 PROK1P58294 105 aa6.55□□□□□ -1.36
VCL-206ENST00000623461 ANKHD1Q8IWZ3 2542 aaKnown RBP6.55□□□□□ -1.36
VCL-206ENST00000623461 SBSPONQ8IVN8 264 aa6.55□□□□□ -1.36
VCL-206ENST00000623461 Q8N814 137 aa6.55□□□□□ -1.36
VCL-206ENST00000623461 IGHV4-30-2A0A087WSY4 118 aa6.54□□□□□ -1.36
VCL-206ENST00000623461 TNFRSF13BO14836 293 aaPredicted RBP6.54□□□□□ -1.36
VCL-206ENST00000623461 SMCPP49901 116 aaPredicted RBP6.54□□□□□ -1.36
VCL-206ENST00000623461 AMELXQ99217 191 aa6.54□□□□□ -1.36
VCL-206ENST00000623461 MRGPRG-AS1Q2M3A8 158 aa6.54□□□□□ -1.36
VCL-206ENST00000623461 NOTCH2Q04721 2471 aa6.54□□□□□ -1.36
VCL-206ENST00000623461 LRRK2Q5S007 2527 aa6.54□□□□□ -1.36
VCL-206ENST00000623461 Q8IZM0 81 aa6.54□□□□□ -1.36
VCL-206ENST00000623461 DHRS4-AS1Q9P1J3 65 aa6.53□□□□□ -1.36
VCL-206ENST00000623461 CD164L2Q6UWJ8 174 aa6.53□□□□□ -1.36
VCL-206ENST00000623461 M0R378 163 aa6.53□□□□□ -1.36
VCL-206ENST00000623461 CDC42SE2Q9NRR3 84 aa6.53□□□□□ -1.36
VCL-206ENST00000623461 ADAMTSL4-AS1Q5T5F5 129 aa6.53□□□□□ -1.36
VCL-206ENST00000623461 SOSTDC1Q6X4U4 206 aa6.53□□□□□ -1.36
VCL-206ENST00000623461 GPR179Q6PRD1 2367 aa6.52□□□□□ -1.36
VCL-206ENST00000623461 LINC00242Q5T6M2 205 aa6.52□□□□□ -1.37
VCL-206ENST00000623461 C3orf84H3BNL1 204 aa6.52□□□□□ -1.37
VCL-206ENST00000623461 CASC2Q6XLA1 102 aa6.52□□□□□ -1.37
VCL-206ENST00000623461 TRBV7-6A0A0J9YX20 115 aa6.52□□□□□ -1.37
VCL-206ENST00000623461 LINC00959A0A1B0GUT2 108 aa6.52□□□□□ -1.37
VCL-206ENST00000623461 SMIM1B2RUZ4 78 aa6.52□□□□□ -1.37
VCL-206ENST00000623461 FAM30AQ9NZY2 134 aa6.52□□□□□ -1.37
VCL-206ENST00000623461 A0A087WYN8 130 aa6.52□□□□□ -1.37
VCL-206ENST00000623461 WFDC10BQ8IUB3 73 aa6.52□□□□□ -1.37
VCL-206ENST00000623461 LMO4P61968 165 aa6.51□□□□□ -1.37
VCL-206ENST00000623461 DEFB114Q30KQ6 69 aa6.51□□□□□ -1.37
VCL-206ENST00000623461 C1orf158Q8N1D5 194 aa6.51□□□□□ -1.37
VCL-206ENST00000623461 ADORA2A-AS1P86434 159 aa6.51□□□□□ -1.37
VCL-206ENST00000623461 C22orf34Q6ZV56 151 aa6.51□□□□□ -1.37
VCL-206ENST00000623461 Q6ZSV7 163 aa6.51□□□□□ -1.37
VCL-206ENST00000623461 C11orf45Q8TAV5 145 aa6.5□□□□□ -1.37
VCL-206ENST00000623461 ESM1Q9NQ30 184 aa6.5□□□□□ -1.37
VCL-206ENST00000623461 A0A1W2PNU3 283 aaPredicted RBP6.5□□□□□ -1.37
VCL-206ENST00000623461 Q8N3U1 123 aa6.5□□□□□ -1.37
VCL-206ENST00000623461 LINC00846Q9NV44 126 aa6.5□□□□□ -1.37
VCL-206ENST00000623461 CHCHD7Q9BUK0 85 aa6.5□□□□□ -1.37
VCL-206ENST00000623461 TTC28Q96AY4 2481 aa6.49□□□□□ -1.37
VCL-206ENST00000623461 DCANP1Q8TF63 244 aa6.49□□□□□ -1.37
VCL-206ENST00000623461 ZNF706Q9Y5V0 76 aaPredicted RBP6.49□□□□□ -1.37
VCL-206ENST00000623461 ZNF73O43830 326 aaPredicted RBP6.49□□□□□ -1.37
VCL-206ENST00000623461 CXCL6P80162 114 aa6.49□□□□□ -1.37
VCL-206ENST00000623461 RETNQ9HD89 108 aa6.49□□□□□ -1.37
VCL-206ENST00000623461 ESRGQ1W209 222 aa6.48□□□□□ -1.37
VCL-206ENST00000623461 TMEM254Q8TBM7 123 aa6.48□□□□□ -1.37
VCL-206ENST00000623461 WFDC10AQ9H1F0 79 aa6.48□□□□□ -1.37
VCL-206ENST00000623461 WISP2O76076 250 aa6.48□□□□□ -1.37
VCL-206ENST00000623461 XAGE1AQ9HD64 81 aa6.47□□□□□ -1.37
VCL-206ENST00000623461 Q8N9L7 120 aa6.47□□□□□ -1.37
VCL-206ENST00000623461 COX6A2Q02221 97 aa6.47□□□□□ -1.37
VCL-206ENST00000623461 C4orf26Q17RF5 130 aa6.47□□□□□ -1.37
VCL-206ENST00000623461 FAM19A1Q7Z5A9 133 aa6.47□□□□□ -1.37
VCL-206ENST00000623461 A0A087WZ39 114 aa6.47□□□□□ -1.37
VCL-206ENST00000623461 PRR4Q16378 134 aa6.47□□□□□ -1.37
VCL-206ENST00000623461 DEFB135Q30KP9 77 aa6.46□□□□□ -1.37
VCL-206ENST00000623461 WFDC13Q8IUB5 93 aa6.46□□□□□ -1.37
VCL-206ENST00000623461 PTPRBP23467 1997 aa6.45□□□□□ -1.38
VCL-206ENST00000623461 Q6ZVQ6 151 aa6.45□□□□□ -1.38
VCL-206ENST00000623461 LINC00474Q9P2X8 69 aa6.45□□□□□ -1.38
VCL-206ENST00000623461 IGLV1-40P01703 118 aa6.45□□□□□ -1.38
VCL-206ENST00000623461 HIGD2AQ9BW72 106 aa6.45□□□□□ -1.38
VCL-206ENST00000623461 LINC01547P58512 204 aaPredicted RBP6.45□□□□□ -1.38
VCL-206ENST00000623461 Q6YL49 198 aa6.45□□□□□ -1.38
VCL-206ENST00000623461 FSHBP01225 129 aa6.45□□□□□ -1.38
VCL-206ENST00000623461 SYCNQ0VAF6 134 aa6.44□□□□□ -1.38
VCL-206ENST00000623461 LRCOL1A6NCL2 159 aa6.44□□□□□ -1.38
VCL-206ENST00000623461 ZNF580Q9UK33 172 aa6.44□□□□□ -1.38
VCL-206ENST00000623461 CELA1Q9UNI1 258 aa6.44□□□□□ -1.38
VCL-206ENST00000623461 LINC01561Q8N1V8 128 aa6.44□□□□□ -1.38
VCL-206ENST00000623461 C11orf71Q6IPW1 123 aa6.43□□□□□ -1.38
VCL-206ENST00000623461 ZNF843Q8N446 348 aa6.43□□□□□ -1.38
VCL-206ENST00000623461 HIVEP3Q5T1R4 2406 aa6.43□□□□□ -1.38
VCL-206ENST00000623461 PSPHP1O15172 72 aa6.43□□□□□ -1.38
VCL-206ENST00000623461 DEFB4AO15263 64 aa6.43□□□□□ -1.38
VCL-206ENST00000623461 BRI3O95415 125 aa6.43□□□□□ -1.38
VCL-206ENST00000623461 LIMD2Q9BT23 127 aa6.43□□□□□ -1.38
VCL-206ENST00000623461 PCSK5Q92824 1860 aa6.42□□□□□ -1.38
VCL-206ENST00000623461 C10orf142B7Z368 130 aa6.42□□□□□ -1.38
VCL-206ENST00000623461 Q8NA96 180 aa6.42□□□□□ -1.38
VCL-206ENST00000623461 PIEZO1Q92508 2521 aa6.42□□□□□ -1.38
VCL-206ENST00000623461 LELP1Q5T871 98 aa6.42□□□□□ -1.38
VCL-206ENST00000623461 LINC00208Q96KT6 92 aa6.42□□□□□ -1.38
VCL-206ENST00000623461 hDV103S1A0JD37 113 aa6.42□□□□□ -1.38
VCL-206ENST00000623461 LINC00575Q6W349 94 aa6.42□□□□□ -1.38
VCL-206ENST00000623461 ZFHX2Q9C0A1 2572 aaPredicted RBP6.41□□□□□ -1.38
VCL-206ENST00000623461 PLAC8L1A1L4L8 177 aa6.41□□□□□ -1.38
VCL-206ENST00000623461 KIF25-AS1Q9Y6Z4 181 aa6.41□□□□□ -1.38
VCL-206ENST00000623461 LOC100131303A0A0U1RQF7 123 aa6.41□□□□□ -1.38
VCL-206ENST00000623461 IGLV5-39A0A0G2JS06 123 aa6.4□□□□□ -1.38
VCL-206ENST00000623461 BEAN1Q3B7T3 259 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms