RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 NTM-AS1Q6ZSK4 140 aa10.05□□□□□ -0.8
LDB3-209ENST00000623056 CDC42SE2Q9NRR3 84 aa10.05□□□□□ -0.8
LDB3-209ENST00000623056 FBN2P35556 2912 aa10.05□□□□□ -0.8
LDB3-209ENST00000623056 IGKV2-28A0A075B6P5 120 aa10.05□□□□□ -0.8
LDB3-209ENST00000623056 IGKV2D-28P01615 120 aa10.05□□□□□ -0.8
LDB3-209ENST00000623056 SLURP1P55000 103 aa10.05□□□□□ -0.8
LDB3-209ENST00000623056 C14orf132Q9NPU4 83 aa10.05□□□□□ -0.8
LDB3-209ENST00000623056 J3QKU1 62 aa10.04□□□□□ -0.8
LDB3-209ENST00000623056 INSP01308 110 aa10.04□□□□□ -0.8
LDB3-209ENST00000623056 UBR5O95071 2799 aaPredicted RBP10.04□□□□□ -0.8
LDB3-209ENST00000623056 CENPEQ02224 2701 aa10.04□□□□□ -0.8
LDB3-209ENST00000623056 ATP5J2P56134 94 aa10.04□□□□□ -0.8
LDB3-209ENST00000623056 RPL18AQ02543 176 aaKnown RBP10.04□□□□□ -0.8
LDB3-209ENST00000623056 DEFB136Q30KP8 78 aa10.04□□□□□ -0.8
LDB3-209ENST00000623056 MIR7-3HGQ8N6C7 128 aa10.04□□□□□ -0.8
LDB3-209ENST00000623056 UBE2E2Q96LR5 201 aa10.04□□□□□ -0.8
LDB3-209ENST00000623056 OVOL2Q9BRP0 275 aa10.04□□□□□ -0.8
LDB3-209ENST00000623056 CYSTM1Q9H1C7 97 aa10.04□□□□□ -0.8
LDB3-209ENST00000623056 IGKV3D-7A0A0C4DH55 119 aa10.03□□□□□ -0.8
LDB3-209ENST00000623056 MAP6D1Q9H9H5 199 aa10.03□□□□□ -0.8
LDB3-209ENST00000623056 SND1-IT1Q9HBX3 110 aa10.03□□□□□ -0.8
LDB3-209ENST00000623056 C18orf65Q6ZTR6 163 aa10.02□□□□□ -0.8
LDB3-209ENST00000623056 FAM19A5Q7Z5A7 132 aaPredicted RBP10.02□□□□□ -0.8
LDB3-209ENST00000623056 SMIM11BQ8TCY0 68 aa10.02□□□□□ -0.8
LDB3-209ENST00000623056 RPL36AP83881 106 aaKnown RBP10.02□□□□□ -0.81
LDB3-209ENST00000623056 RPL36ALQ969Q0 106 aaKnown RBP10.02□□□□□ -0.81
LDB3-209ENST00000623056 POLQO75417 2590 aa10.02□□□□□ -0.81
LDB3-209ENST00000623056 Q6JHZ5 121 aa10.01□□□□□ -0.81
LDB3-209ENST00000623056 LINC00846Q9NV44 126 aa10.01□□□□□ -0.81
LDB3-209ENST00000623056 TRGV1A0A0A0MS02 117 aa10.01□□□□□ -0.81
LDB3-209ENST00000623056 B4DSR2 109 aa10.01□□□□□ -0.81
LDB3-209ENST00000623056 OBSCN-AS1Q96MR7 158 aa10.01□□□□□ -0.81
LDB3-209ENST00000623056 K7EQD1 137 aa10□□□□□ -0.81
LDB3-209ENST00000623056 COX7B2Q8TF08 81 aa10□□□□□ -0.81
LDB3-209ENST00000623056 RPS28P62857 69 aaKnown RBP10□□□□□ -0.81
LDB3-209ENST00000623056 XCL2Q9UBD3 114 aa10□□□□□ -0.81
LDB3-209ENST00000623056 TRBV10-1A0A0K0K1A3 114 aa9.99□□□□□ -0.81
LDB3-209ENST00000623056 TENM4Q6N022 2769 aa9.99□□□□□ -0.81
LDB3-209ENST00000623056 A0A087WVE0 104 aa9.99□□□□□ -0.81
LDB3-209ENST00000623056 H0YGX0 51 aa9.99□□□□□ -0.81
LDB3-209ENST00000623056 ZNF702PQ9H963 129 aa9.99□□□□□ -0.81
LDB3-209ENST00000623056 SETXQ7Z333 2677 aaKnown RBP9.98□□□□□ -0.81
LDB3-209ENST00000623056 SMIM9A6NGZ8 99 aa9.98□□□□□ -0.81
LDB3-209ENST00000623056 C5orf47Q569G3 176 aa9.98□□□□□ -0.81
LDB3-209ENST00000623056 SERP2Q8N6R1 65 aa9.98□□□□□ -0.81
LDB3-209ENST00000623056 IL17DQ8TAD2 202 aa9.98□□□□□ -0.81
LDB3-209ENST00000623056 TOMM7Q9P0U1 55 aa9.98□□□□□ -0.81
LDB3-209ENST00000623056 NCR3O14931 201 aa9.98□□□□□ -0.81
LDB3-209ENST00000623056 UBE2L6O14933 153 aa9.98□□□□□ -0.81
LDB3-209ENST00000623056 LECT2O14960 151 aa9.98□□□□□ -0.81
LDB3-209ENST00000623056 CCL18P55774 89 aa9.98□□□□□ -0.81
LDB3-209ENST00000623056 LINC00158P58513 81 aa9.98□□□□□ -0.81
LDB3-209ENST00000623056 Q6ZTI0 123 aa9.97□□□□□ -0.81
LDB3-209ENST00000623056 LINC01561Q8N1V8 128 aa9.97□□□□□ -0.81
LDB3-209ENST00000623056 UPK3BQ9BT76 320 aa9.97□□□□□ -0.81
LDB3-209ENST00000623056 C2CD3Q4AC94 2353 aa9.97□□□□□ -0.81
LDB3-209ENST00000623056 FLNBO75369 2602 aaKnown RBP9.96□□□□□ -0.81
LDB3-209ENST00000623056 TMEM243Q9BU79 118 aa9.96□□□□□ -0.81
LDB3-209ENST00000623056 C1orf158Q8N1D5 194 aa9.96□□□□□ -0.82
LDB3-209ENST00000623056 KIR2DL5BQ8NHK3 375 aa9.96□□□□□ -0.82
LDB3-209ENST00000623056 TMEM258P61165 79 aa9.95□□□□□ -0.82
LDB3-209ENST00000623056 DYNLRB2Q8TF09 96 aa9.95□□□□□ -0.82
LDB3-209ENST00000623056 USP17L23D6RBM5 183 aa9.95□□□□□ -0.82
LDB3-209ENST00000623056 SLPIP03973 132 aa9.95□□□□□ -0.82
LDB3-209ENST00000623056 KRTAP10-9P60411 292 aa9.94□□□□□ -0.82
LDB3-209ENST00000623056 DPH3Q96FX2 82 aa9.94□□□□□ -0.82
LDB3-209ENST00000623056 PTPN13Q12923 2485 aa9.94□□□□□ -0.82
LDB3-209ENST00000623056 ABCA12Q86UK0 2595 aa9.94□□□□□ -0.82
LDB3-209ENST00000623056 ANKRD17O75179 2603 aaKnown RBP9.94□□□□□ -0.82
LDB3-209ENST00000623056 IGKV3OR2-268A0A0C4DH90 116 aa9.94□□□□□ -0.82
LDB3-209ENST00000623056 MAPK1IP1LQ8NDC0 245 aa9.94□□□□□ -0.82
LDB3-209ENST00000623056 DEFB114Q30KQ6 69 aa9.93□□□□□ -0.82
LDB3-209ENST00000623056 OR13C6PQ8NH95 151 aa9.93□□□□□ -0.82
LDB3-209ENST00000623056 USP9YO00507 2555 aaPredicted RBP9.93□□□□□ -0.82
LDB3-209ENST00000623056 NBPF19A0A087WUL8 3843 aa9.92□□□□□ -0.82
LDB3-209ENST00000623056 PFN2P35080 140 aa9.92□□□□□ -0.82
LDB3-209ENST00000623056 SS18Q15532 418 aa9.92□□□□□ -0.82
LDB3-209ENST00000623056 ZANQ9Y493 2812 aa9.92□□□□□ -0.82
LDB3-209ENST00000623056 IBA57-AS1B1ANH7 110 aa9.91□□□□□ -0.82
LDB3-209ENST00000623056 PAX4O43316 350 aa9.91□□□□□ -0.82
LDB3-209ENST00000623056 ODF3L2Q3SX64 289 aa9.91□□□□□ -0.82
LDB3-209ENST00000623056 STHQ8IWL8 128 aa9.9□□□□□ -0.82
LDB3-209ENST00000623056 LINC01356Q8N9X3 169 aa9.9□□□□□ -0.82
LDB3-209ENST00000623056 DSCR8Q96T75 97 aa9.9□□□□□ -0.82
LDB3-209ENST00000623056 ORMDL1Q9P0S3 153 aa9.9□□□□□ -0.82
LDB3-209ENST00000623056 IGHV3OR16-9A0A0B4J2B5 98 aa9.9□□□□□ -0.82
LDB3-209ENST00000623056 LOC100131303A0A0U1RQF7 123 aa9.9□□□□□ -0.82
LDB3-209ENST00000623056 CCKP06307 115 aa9.9□□□□□ -0.82
LDB3-209ENST00000623056 OXTP01178 125 aa9.89□□□□□ -0.83
LDB3-209ENST00000623056 KHDC1LQ5JSQ8 128 aa9.89□□□□□ -0.83
LDB3-209ENST00000623056 Q6YL49 198 aa9.89□□□□□ -0.83
LDB3-209ENST00000623056 NOP10Q9NPE3 64 aaKnown RBP9.89□□□□□ -0.83
LDB3-209ENST00000623056 IGLV4-60A0A075B6I1 120 aa9.89□□□□□ -0.83
LDB3-209ENST00000623056 TRBV6-4A0A1B0GX49 114 aa9.89□□□□□ -0.83
LDB3-209ENST00000623056 C4orf3Q8WVX3 66 aa9.88□□□□□ -0.83
LDB3-209ENST00000623056 LY6G6DO95868 133 aa9.88□□□□□ -0.83
LDB3-209ENST00000623056 HILS1P60008 231 aa9.88□□□□□ -0.83
LDB3-209ENST00000623056 NAV2Q8IVL1 2488 aa9.87□□□□□ -0.83
LDB3-209ENST00000623056 MXRA5Q9NR99 2828 aa9.87□□□□□ -0.83
LDB3-209ENST00000623056 A0A087WZ39 114 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms