RNA–Protein interactions for RNA: ENST00000622817.4

CBWD3-219, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,877 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-219ENST00000622817 ESRGQ1W209 222 aa4.79□□□□□ -1.64
CBWD3-219ENST00000622817 LINC00242Q5T6M2 205 aa4.79□□□□□ -1.64
CBWD3-219ENST00000622817 LINC00469Q8N7U9 141 aa4.79□□□□□ -1.64
CBWD3-219ENST00000622817 IGKV2D-26A0A0A0MRZ7 120 aa4.79□□□□□ -1.64
CBWD3-219ENST00000622817 TMEM223A0PJW6 202 aa4.79□□□□□ -1.64
CBWD3-219ENST00000622817 IGLL5B9A064 214 aa4.79□□□□□ -1.64
CBWD3-219ENST00000622817 CCL25O15444 150 aa4.79□□□□□ -1.64
CBWD3-219ENST00000622817 DLEU1O43261 78 aa4.79□□□□□ -1.64
CBWD3-219ENST00000622817 BOD1L2Q8IYS8 172 aa4.79□□□□□ -1.64
CBWD3-219ENST00000622817 IGKV3OR2-268A0A0C4DH90 116 aa4.78□□□□□ -1.64
CBWD3-219ENST00000622817 LINC00959A0A1B0GUT2 108 aa4.78□□□□□ -1.64
CBWD3-219ENST00000622817 ANGP03950 147 aaKnown RBP4.78□□□□□ -1.64
CBWD3-219ENST00000622817 HNRNPA3P51991 378 aaKnown RBP4.78□□□□□ -1.64
CBWD3-219ENST00000622817 SS18Q15532 418 aa4.78□□□□□ -1.64
CBWD3-219ENST00000622817 PCP2Q8IVA1 136 aa4.78□□□□□ -1.64
CBWD3-219ENST00000622817 LINC00269Q8N2A0 174 aa4.78□□□□□ -1.64
CBWD3-219ENST00000622817 COL7A1Q02388 2944 aa4.78□□□□□ -1.64
CBWD3-219ENST00000622817 HUWE1Q7Z6Z7 4374 aaKnown RBP4.78□□□□□ -1.64
CBWD3-219ENST00000622817 LINC00587B1AMM8 73 aa4.77□□□□□ -1.65
CBWD3-219ENST00000622817 LEPROTO15243 131 aa4.77□□□□□ -1.65
CBWD3-219ENST00000622817 COX6A2Q02221 97 aa4.77□□□□□ -1.65
CBWD3-219ENST00000622817 REG3AQ06141 175 aa4.77□□□□□ -1.65
CBWD3-219ENST00000622817 SVIPQ8NHG7 77 aa4.77□□□□□ -1.65
CBWD3-219ENST00000622817 PLEKHB2Q96CS7 222 aa4.77□□□□□ -1.65
CBWD3-219ENST00000622817 CDKN2A-AS1Q9UH64 79 aa4.77□□□□□ -1.65
CBWD3-219ENST00000622817 CCL18P55774 89 aa4.77□□□□□ -1.65
CBWD3-219ENST00000622817 WFDC10BQ8IUB3 73 aa4.77□□□□□ -1.65
CBWD3-219ENST00000622817 MRPS16Q9Y3D3 137 aaKnown RBP4.77□□□□□ -1.65
CBWD3-219ENST00000622817 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.77□□□□□ -1.65
CBWD3-219ENST00000622817 IGHV1-58A0A0C4DH39 117 aa4.76□□□□□ -1.65
CBWD3-219ENST00000622817 MYMXA0A1B0GTQ4 84 aa4.76□□□□□ -1.65
CBWD3-219ENST00000622817 NUPR2A6NF83 97 aa4.76□□□□□ -1.65
CBWD3-219ENST00000622817 J3QQQ9 107 aa4.76□□□□□ -1.65
CBWD3-219ENST00000622817 SIVA1O15304 175 aa4.76□□□□□ -1.65
CBWD3-219ENST00000622817 IGHV3-30P01768 117 aa4.76□□□□□ -1.65
CBWD3-219ENST00000622817 IGHV3-33P01772 117 aa4.76□□□□□ -1.65
CBWD3-219ENST00000622817 SPINK8P0C7L1 97 aa4.76□□□□□ -1.65
CBWD3-219ENST00000622817 IGHV3-30-3P0DP02 117 aa4.76□□□□□ -1.65
CBWD3-219ENST00000622817 IGHV3-30-5P0DP03 117 aa4.76□□□□□ -1.65
CBWD3-219ENST00000622817 LGALS3P17931 250 aaKnown RBP4.76□□□□□ -1.65
CBWD3-219ENST00000622817 LINC01556Q5JQF7 62 aa4.76□□□□□ -1.65
CBWD3-219ENST00000622817 PRR34Q9NV39 138 aa4.76□□□□□ -1.65
CBWD3-219ENST00000622817 KLK12Q9UKR0 248 aa4.76□□□□□ -1.65
CBWD3-219ENST00000622817 KLK5Q9Y337 293 aaPredicted RBP4.76□□□□□ -1.65
CBWD3-219ENST00000622817 IGHV3-64A0A075B6Q5 118 aa4.75□□□□□ -1.65
CBWD3-219ENST00000622817 TRAV8-3A0A0A6YYJ7 113 aa4.75□□□□□ -1.65
CBWD3-219ENST00000622817 IGHV3OR16-9A0A0B4J2B5 98 aa4.75□□□□□ -1.65
CBWD3-219ENST00000622817 ZNF815PA8K554 130 aa4.75□□□□□ -1.65
CBWD3-219ENST00000622817 CTAG1AP78358 180 aa4.75□□□□□ -1.65
CBWD3-219ENST00000622817 CLPSL2Q6UWE3 100 aa4.75□□□□□ -1.65
CBWD3-219ENST00000622817 MAPKAPK5-AS1Q8N8E1 139 aa4.75□□□□□ -1.65
CBWD3-219ENST00000622817 TTTY13Q9BZ97 58 aa4.75□□□□□ -1.65
CBWD3-219ENST00000622817 TP73-AS1Q9UF72 201 aa4.75□□□□□ -1.65
CBWD3-219ENST00000622817 LINC00588Q9Y4M8 146 aa4.75□□□□□ -1.65
CBWD3-219ENST00000622817 DNAH9Q9NYC9 4486 aa4.75□□□□□ -1.65
CBWD3-219ENST00000622817 A0A087WZ39 114 aa4.75□□□□□ -1.65
CBWD3-219ENST00000622817 IGLV5-39A0A0G2JS06 123 aa4.75□□□□□ -1.65
CBWD3-219ENST00000622817 SMIM1B2RUZ4 78 aa4.75□□□□□ -1.65
CBWD3-219ENST00000622817 CRPP02741 224 aa4.75□□□□□ -1.65
CBWD3-219ENST00000622817 DNAH10OSP0CZ25 163 aa4.75□□□□□ -1.65
CBWD3-219ENST00000622817 XCL1P47992 114 aa4.75□□□□□ -1.65
CBWD3-219ENST00000622817 TSPEAR-AS2P59090 65 aa4.75□□□□□ -1.65
CBWD3-219ENST00000622817 CD164L2Q6UWJ8 174 aa4.75□□□□□ -1.65
CBWD3-219ENST00000622817 C2orf91Q6ZV80 131 aa4.75□□□□□ -1.65
CBWD3-219ENST00000622817 CHCHD10Q8WYQ3 142 aaPredicted RBP4.75□□□□□ -1.65
CBWD3-219ENST00000622817 HIGD1BQ9P298 99 aa4.75□□□□□ -1.65
CBWD3-219ENST00000622817 APLNQ9ULZ1 77 aa4.75□□□□□ -1.65
CBWD3-219ENST00000622817 TRAV8-4A0A0B4J246 113 aa4.74□□□□□ -1.65
CBWD3-219ENST00000622817 ENHOQ6UWT2 76 aa4.74□□□□□ -1.65
CBWD3-219ENST00000622817 LINC01561Q8N1V8 128 aa4.74□□□□□ -1.65
CBWD3-219ENST00000622817 UBE2WQ96B02 151 aa4.74□□□□□ -1.65
CBWD3-219ENST00000622817 UPK3BQ9BT76 320 aa4.74□□□□□ -1.65
CBWD3-219ENST00000622817 MIAQ16674 131 aa4.73□□□□□ -1.65
CBWD3-219ENST00000622817 ZFAND6Q6FIF0 208 aa4.73□□□□□ -1.65
CBWD3-219ENST00000622817 SCGB1D4Q6XE38 83 aa4.73□□□□□ -1.65
CBWD3-219ENST00000622817 C5orf38Q86SI9 138 aa4.73□□□□□ -1.65
CBWD3-219ENST00000622817 FBN3Q75N90 2809 aa4.73□□□□□ -1.65
CBWD3-219ENST00000622817 IGLV10-54A0A075B6I4 117 aa4.73□□□□□ -1.65
CBWD3-219ENST00000622817 M0R143 59 aa4.73□□□□□ -1.65
CBWD3-219ENST00000622817 COX7A2LO14548 114 aa4.73□□□□□ -1.65
CBWD3-219ENST00000622817 NDUFA12Q9UI09 145 aa4.73□□□□□ -1.65
CBWD3-219ENST00000622817 PRKDCP78527 4128 aaKnown RBP4.72□□□□□ -1.65
CBWD3-219ENST00000622817 GAGE12HA6NDE8 117 aa4.72□□□□□ -1.65
CBWD3-219ENST00000622817 HSD52Q0P140 79 aa4.72□□□□□ -1.65
CBWD3-219ENST00000622817 FOXI1Q12951 378 aa4.72□□□□□ -1.65
CBWD3-219ENST00000622817 UBE2DNLQ8IWF7 75 aa4.72□□□□□ -1.65
CBWD3-219ENST00000622817 C10orf126Q8N4M7 172 aa4.72□□□□□ -1.65
CBWD3-219ENST00000622817 COX7B2Q8TF08 81 aa4.72□□□□□ -1.65
CBWD3-219ENST00000622817 KRTAP4-7Q9BYR0 210 aa4.72□□□□□ -1.65
CBWD3-219ENST00000622817 K7EP13 123 aa4.71□□□□□ -1.66
CBWD3-219ENST00000622817 NDUFA1O15239 70 aa4.71□□□□□ -1.66
CBWD3-219ENST00000622817 MALP21145 153 aa4.71□□□□□ -1.66
CBWD3-219ENST00000622817 Q9H8V8 135 aa4.71□□□□□ -1.66
CBWD3-219ENST00000622817 A0A0J9YXY3 114 aa4.71□□□□□ -1.66
CBWD3-219ENST00000622817 APOMO95445 188 aa4.71□□□□□ -1.66
CBWD3-219ENST00000622817 HINT1P49773 126 aaPredicted RBP4.71□□□□□ -1.66
CBWD3-219ENST00000622817 TAL2Q16559 108 aa4.71□□□□□ -1.66
CBWD3-219ENST00000622817 SNHG12Q9BXW3 62 aa4.71□□□□□ -1.66
CBWD3-219ENST00000622817 TOMM7Q9P0U1 55 aa4.71□□□□□ -1.66
CBWD3-219ENST00000622817 IBA57-AS1B1ANH7 110 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms