RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 ZANQ9Y493 2812 aa6.44□□□□□ -1.38
HDAC9-229ENST00000622668 CDKN2A-AS1Q9UH64 79 aa6.44□□□□□ -1.38
HDAC9-229ENST00000622668 H7C423 109 aa6.44□□□□□ -1.38
HDAC9-229ENST00000622668 ESRGQ1W209 222 aa6.44□□□□□ -1.38
HDAC9-229ENST00000622668 Q8NAQ8 132 aa6.44□□□□□ -1.38
HDAC9-229ENST00000622668 C16orf90A8MZG2 172 aa6.43□□□□□ -1.38
HDAC9-229ENST00000622668 CD164L2Q6UWJ8 174 aa6.43□□□□□ -1.38
HDAC9-229ENST00000622668 C6orf223Q8N319 242 aa6.43□□□□□ -1.38
HDAC9-229ENST00000622668 SND1-IT1Q9HBX3 110 aa6.43□□□□□ -1.38
HDAC9-229ENST00000622668 A0A096LNI7 61 aa6.43□□□□□ -1.38
HDAC9-229ENST00000622668 USP17L23D6RBM5 183 aa6.43□□□□□ -1.38
HDAC9-229ENST00000622668 NCR3O14931 201 aa6.43□□□□□ -1.38
HDAC9-229ENST00000622668 LBHQ53QV2 105 aaPredicted RBP6.43□□□□□ -1.38
HDAC9-229ENST00000622668 PIK3CD-AS1Q5SR53 167 aa6.43□□□□□ -1.38
HDAC9-229ENST00000622668 LGALS9CQ6DKI2 356 aa6.43□□□□□ -1.38
HDAC9-229ENST00000622668 UFSP1Q6NVU6 142 aa6.43□□□□□ -1.38
HDAC9-229ENST00000622668 CHCHD7Q9BUK0 85 aa6.43□□□□□ -1.38
HDAC9-229ENST00000622668 COL5A1-AS1Q5SY13 56 aa6.42□□□□□ -1.38
HDAC9-229ENST00000622668 LINC00959A0A1B0GUT2 108 aa6.42□□□□□ -1.38
HDAC9-229ENST00000622668 TOMM6Q96B49 74 aa6.42□□□□□ -1.38
HDAC9-229ENST00000622668 C11orf86A6NJI1 115 aa6.42□□□□□ -1.38
HDAC9-229ENST00000622668 MIR7-3HGQ8N6C7 128 aa6.42□□□□□ -1.38
HDAC9-229ENST00000622668 EGFEM1PQ0D2K5 195 aa6.42□□□□□ -1.38
HDAC9-229ENST00000622668 C19orf73Q9NVV2 129 aa6.41□□□□□ -1.38
HDAC9-229ENST00000622668 MYO15AQ9UKN7 3530 aa6.41□□□□□ -1.38
HDAC9-229ENST00000622668 TRBV27A0A0K0K1C4 114 aa6.41□□□□□ -1.38
HDAC9-229ENST00000622668 RNF151Q2KHN1 245 aa6.41□□□□□ -1.38
HDAC9-229ENST00000622668 FOXI1Q12951 378 aa6.41□□□□□ -1.38
HDAC9-229ENST00000622668 LINC00173Q6ZV60 143 aa6.41□□□□□ -1.38
HDAC9-229ENST00000622668 NBEAL2Q6ZNJ1 2754 aa6.4□□□□□ -1.38
HDAC9-229ENST00000622668 IGLV4-69A0A075B6H9 119 aa6.4□□□□□ -1.38
HDAC9-229ENST00000622668 IGLV4-3A0A075B6K6 122 aa6.4□□□□□ -1.38
HDAC9-229ENST00000622668 FAM19A1Q7Z5A9 133 aa6.4□□□□□ -1.38
HDAC9-229ENST00000622668 HSD52Q0P140 79 aa6.4□□□□□ -1.38
HDAC9-229ENST00000622668 C2orf82Q6UX34 121 aa6.4□□□□□ -1.38
HDAC9-229ENST00000622668 LRBAP50851 2863 aa6.4□□□□□ -1.38
HDAC9-229ENST00000622668 CELSR2Q9HCU4 2923 aa6.4□□□□□ -1.39
HDAC9-229ENST00000622668 NAA38Q9BRA0 125 aaKnown RBP6.4□□□□□ -1.39
HDAC9-229ENST00000622668 TRBV6-5A0A0K0K1A5 114 aa6.39□□□□□ -1.39
HDAC9-229ENST00000622668 A0A1B0GXF2 115 aa6.39□□□□□ -1.39
HDAC9-229ENST00000622668 UBE2D1P51668 147 aa6.39□□□□□ -1.39
HDAC9-229ENST00000622668 Q6ZSN1 163 aa6.39□□□□□ -1.39
HDAC9-229ENST00000622668 TRAV13-2A0A0B4J235 113 aa6.39□□□□□ -1.39
HDAC9-229ENST00000622668 NBDYA0A0U1RRE5 68 aa6.39□□□□□ -1.39
HDAC9-229ENST00000622668 H3BUT2 72 aa6.39□□□□□ -1.39
HDAC9-229ENST00000622668 TSHBP01222 138 aa6.39□□□□□ -1.39
HDAC9-229ENST00000622668 C9orf153Q5TBE3 101 aa6.39□□□□□ -1.39
HDAC9-229ENST00000622668 C11orf72Q8NBR9 251 aa6.39□□□□□ -1.39
HDAC9-229ENST00000622668 IGLV4-60A0A075B6I1 120 aa6.39□□□□□ -1.39
HDAC9-229ENST00000622668 COX6A2Q02221 97 aa6.39□□□□□ -1.39
HDAC9-229ENST00000622668 LINC00315P59091 139 aa6.39□□□□□ -1.39
HDAC9-229ENST00000622668 GAS8-AS1O95177 125 aa6.38□□□□□ -1.39
HDAC9-229ENST00000622668 SCGB1A1P11684 91 aa6.38□□□□□ -1.39
HDAC9-229ENST00000622668 DDTP30046 118 aa6.38□□□□□ -1.39
HDAC9-229ENST00000622668 ATXN8Q156A1 80 aa6.38□□□□□ -1.39
HDAC9-229ENST00000622668 RNF185Q96GF1 192 aa6.38□□□□□ -1.39
HDAC9-229ENST00000622668 TM2D3Q9BRN9 247 aa6.38□□□□□ -1.39
HDAC9-229ENST00000622668 LOC107984640A0A0U1RRK4 108 aa6.38□□□□□ -1.39
HDAC9-229ENST00000622668 DCHS1Q96JQ0 3298 aa6.38□□□□□ -1.39
HDAC9-229ENST00000622668 POLR2KP53803 58 aaKnown RBP6.37□□□□□ -1.39
HDAC9-229ENST00000622668 C10orf91Q5T1B1 145 aa6.37□□□□□ -1.39
HDAC9-229ENST00000622668 LINC00474Q9P2X8 69 aa6.37□□□□□ -1.39
HDAC9-229ENST00000622668 IGKV2-28A0A075B6P5 120 aa6.37□□□□□ -1.39
HDAC9-229ENST00000622668 IGKV2D-28P01615 120 aa6.37□□□□□ -1.39
HDAC9-229ENST00000622668 RPL32P62910 135 aaKnown RBP6.36□□□□□ -1.39
HDAC9-229ENST00000622668 LINC00588Q9Y4M8 146 aa6.36□□□□□ -1.39
HDAC9-229ENST00000622668 A0A1B0GWB2 263 aa6.36□□□□□ -1.39
HDAC9-229ENST00000622668 LINC00694P0DN24 101 aa6.36□□□□□ -1.39
HDAC9-229ENST00000622668 CDC42SE2Q9NRR3 84 aa6.36□□□□□ -1.39
HDAC9-229ENST00000622668 TINCRA0A1B0GVN0 87 aa6.36□□□□□ -1.39
HDAC9-229ENST00000622668 TTTY13Q9BZ97 58 aa6.36□□□□□ -1.39
HDAC9-229ENST00000622668 SPCS1Q9Y6A9 102 aa6.35□□□□□ -1.39
HDAC9-229ENST00000622668 UBE2D4Q9Y2X8 147 aa6.35□□□□□ -1.39
HDAC9-229ENST00000622668 PCP2Q8IVA1 136 aa6.35□□□□□ -1.39
HDAC9-229ENST00000622668 PRSS47A8MTI9 375 aa6.34□□□□□ -1.39
HDAC9-229ENST00000622668 LINC01556Q5JQF7 62 aa6.34□□□□□ -1.39
HDAC9-229ENST00000622668 UNQ6190/PRO20217Q6UXQ8 127 aa6.34□□□□□ -1.39
HDAC9-229ENST00000622668 NRACQ8N912 160 aa6.34□□□□□ -1.39
HDAC9-229ENST00000622668 DIRC1Q969H9 104 aa6.34□□□□□ -1.39
HDAC9-229ENST00000622668 TRAV12-1A0A0B4J245 112 aa6.33□□□□□ -1.4
HDAC9-229ENST00000622668 RPL37AP8A6NKH3 93 aa6.33□□□□□ -1.4
HDAC9-229ENST00000622668 A8MZ25 164 aa6.33□□□□□ -1.4
HDAC9-229ENST00000622668 FAM229AH3BQW9 127 aa6.33□□□□□ -1.4
HDAC9-229ENST00000622668 NUPR1O60356 82 aa6.33□□□□□ -1.4
HDAC9-229ENST00000622668 SPATA12Q7Z6I5 190 aa6.33□□□□□ -1.4
HDAC9-229ENST00000622668 PPDPFQ9H3Y8 114 aa6.33□□□□□ -1.4
HDAC9-229ENST00000622668 CNFNQ9BYD5 112 aa6.32□□□□□ -1.4
HDAC9-229ENST00000622668 PYGO1Q9Y3Y4 419 aa6.32□□□□□ -1.4
HDAC9-229ENST00000622668 ZNF22P17026 224 aaPredicted RBP6.32□□□□□ -1.4
HDAC9-229ENST00000622668 ODF1Q14990 250 aa6.32□□□□□ -1.4
HDAC9-229ENST00000622668 KLK9Q2XQG4 91 aa6.32□□□□□ -1.4
HDAC9-229ENST00000622668 H3BNG1 76 aa6.32□□□□□ -1.4
HDAC9-229ENST00000622668 IFITM1P13164 125 aa6.32□□□□□ -1.4
HDAC9-229ENST00000622668 DMBT1Q9UGM3 2413 aaPredicted RBP6.32□□□□□ -1.4
HDAC9-229ENST00000622668 LINC01620Q4KN68 170 aa6.31□□□□□ -1.4
HDAC9-229ENST00000622668 K7EP13 123 aa6.31□□□□□ -1.4
HDAC9-229ENST00000622668 M0QXV9 152 aa6.31□□□□□ -1.4
HDAC9-229ENST00000622668 ANKRD39Q53RE8 183 aa6.31□□□□□ -1.4
HDAC9-229ENST00000622668 MUSTN1Q8IVN3 82 aa6.31□□□□□ -1.4
HDAC9-229ENST00000622668 PRO1854Q9UHT4 67 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms