RNA–Protein interactions for RNA: ENST00000622209.4

PMPCA-212, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 1 (best)

Gene PMPCA, Length 1,013 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-212ENST00000622209 IGHV1-58A0A0C4DH39 117 aa13.63□□□□□ -0.23
PMPCA-212ENST00000622209 IGIPA6NJ69 53 aa13.63□□□□□ -0.23
PMPCA-212ENST00000622209 IFITM10A6NMD0 228 aa13.63□□□□□ -0.23
PMPCA-212ENST00000622209 FA2HQ7L5A8 372 aa13.63□□□□□ -0.23
PMPCA-212ENST00000622209 GVQW2A0A096LPI5 108 aaPredicted RBP13.62□□□□□ -0.23
PMPCA-212ENST00000622209 LINC01549A6NIU2 74 aa13.62□□□□□ -0.23
PMPCA-212ENST00000622209 C9orf163Q8N9P6 203 aa13.62□□□□□ -0.23
PMPCA-212ENST00000622209 TOMM6Q96B49 74 aa13.62□□□□□ -0.23
PMPCA-212ENST00000622209 CHAC1Q9BUX1 264 aa13.62□□□□□ -0.23
PMPCA-212ENST00000622209 COX7A2LO14548 114 aa13.61□□□□□ -0.23
PMPCA-212ENST00000622209 Q6ZN92 141 aa13.61□□□□□ -0.23
PMPCA-212ENST00000622209 TEX43Q6ZNM6 134 aa13.61□□□□□ -0.23
PMPCA-212ENST00000622209 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.6□□□□□ -0.23
PMPCA-212ENST00000622209 PAPPA-AS1Q5QFB9 102 aa13.6□□□□□ -0.23
PMPCA-212ENST00000622209 CIRBP-AS1Q8TBR5 109 aa13.6□□□□□ -0.23
PMPCA-212ENST00000622209 C18orf32Q8TCD1 76 aa13.6□□□□□ -0.23
PMPCA-212ENST00000622209 TIMM17AQ99595 171 aa13.6□□□□□ -0.23
PMPCA-212ENST00000622209 VCX2Q9H322 139 aa13.6□□□□□ -0.23
PMPCA-212ENST00000622209 SLPIP03973 132 aa13.59□□□□□ -0.23
PMPCA-212ENST00000622209 MALP21145 153 aa13.59□□□□□ -0.23
PMPCA-212ENST00000622209 HIGD2BQ4VC39 106 aa13.59□□□□□ -0.23
PMPCA-212ENST00000622209 AMELXQ99217 191 aa13.59□□□□□ -0.23
PMPCA-212ENST00000622209 C2orf88Q9BSF0 95 aa13.59□□□□□ -0.23
PMPCA-212ENST00000622209 KRTAP29-1A8MX34 341 aaPredicted RBP13.58□□□□□ -0.24
PMPCA-212ENST00000622209 ERASQ7Z444 233 aa13.58□□□□□ -0.24
PMPCA-212ENST00000622209 LINC00614P0C842 121 aa13.57□□□□□ -0.24
PMPCA-212ENST00000622209 C5orf38Q86SI9 138 aa13.57□□□□□ -0.24
PMPCA-212ENST00000622209 SCGB3A1Q96QR1 104 aa13.57□□□□□ -0.24
PMPCA-212ENST00000622209 LRP1Q07954 4544 aaKnown RBP13.56□□□□□ -0.24
PMPCA-212ENST00000622209 IGHV3OR16-9A0A0B4J2B5 98 aa13.56□□□□□ -0.24
PMPCA-212ENST00000622209 APOMO95445 188 aa13.56□□□□□ -0.24
PMPCA-212ENST00000622209 RAB5BP61020 215 aa13.56□□□□□ -0.24
PMPCA-212ENST00000622209 ZNF561-AS1K7EIQ3 104 aa13.55□□□□□ -0.24
PMPCA-212ENST00000622209 UBE2D1P51668 147 aa13.55□□□□□ -0.24
PMPCA-212ENST00000622209 LINC00173Q6ZV60 143 aa13.55□□□□□ -0.24
PMPCA-212ENST00000622209 IGHV3-64A0A075B6Q5 118 aa13.54□□□□□ -0.24
PMPCA-212ENST00000622209 KRTAP10-4P60372 401 aaPredicted RBP13.54□□□□□ -0.24
PMPCA-212ENST00000622209 LINC00242Q5T6M2 205 aa13.54□□□□□ -0.24
PMPCA-212ENST00000622209 SDIM1Q6ZPB5 146 aa13.54□□□□□ -0.24
PMPCA-212ENST00000622209 URB1-AS1Q96HZ7 61 aa13.54□□□□□ -0.24
PMPCA-212ENST00000622209 ZC2HC1BQ5TFG8 222 aa13.53□□□□□ -0.24
PMPCA-212ENST00000622209 FAM19A3Q7Z5A8 133 aa13.52□□□□□ -0.25
PMPCA-212ENST00000622209 FAT3Q8TDW7 4589 aa13.51□□□□□ -0.25
PMPCA-212ENST00000622209 COLCA2A8K830 154 aa13.51□□□□□ -0.25
PMPCA-212ENST00000622209 COX6A2Q02221 97 aa13.51□□□□□ -0.25
PMPCA-212ENST00000622209 A0A087WZ39 114 aa13.5□□□□□ -0.25
PMPCA-212ENST00000622209 SEC11AP67812 179 aa13.5□□□□□ -0.25
PMPCA-212ENST00000622209 OR10D4PQ8NGN7 298 aa13.5□□□□□ -0.25
PMPCA-212ENST00000622209 LINC00526Q96FQ7 95 aa13.5□□□□□ -0.25
PMPCA-212ENST00000622209 IGLV4-69A0A075B6H9 119 aa13.49□□□□□ -0.25
PMPCA-212ENST00000622209 TRGC2P03986 189 aa13.49□□□□□ -0.25
PMPCA-212ENST00000622209 LINC01561Q8N1V8 128 aa13.49□□□□□ -0.25
PMPCA-212ENST00000622209 C2orf48Q96LS8 159 aa13.49□□□□□ -0.25
PMPCA-212ENST00000622209 A0A096LNJ9 63 aa13.48□□□□□ -0.25
PMPCA-212ENST00000622209 HBDP02042 147 aa13.48□□□□□ -0.25
PMPCA-212ENST00000622209 SYCNQ0VAF6 134 aa13.48□□□□□ -0.25
PMPCA-212ENST00000622209 CHCHD1Q96BP2 118 aaKnown RBP13.48□□□□□ -0.25
PMPCA-212ENST00000622209 HMCN2Q8NDA2 5059 aa13.47□□□□□ -0.25
PMPCA-212ENST00000622209 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.47□□□□□ -0.25
PMPCA-212ENST00000622209 ORAOV1Q8WV07 137 aa13.47□□□□□ -0.25
PMPCA-212ENST00000622209 CARD19Q96LW7 228 aa13.47□□□□□ -0.25
PMPCA-212ENST00000622209 F8WDY8 70 aa13.46□□□□□ -0.25
PMPCA-212ENST00000622209 HERVK_113P63121 156 aa13.46□□□□□ -0.25
PMPCA-212ENST00000622209 SPAG11BQ08648 103 aa13.46□□□□□ -0.25
PMPCA-212ENST00000622209 CST9LQ9H4G1 147 aa13.46□□□□□ -0.25
PMPCA-212ENST00000622209 PKIGQ9Y2B9 76 aa13.46□□□□□ -0.25
PMPCA-212ENST00000622209 RPL37AP61513 92 aaKnown RBP13.45□□□□□ -0.26
PMPCA-212ENST00000622209 PMVKQ15126 192 aa13.45□□□□□ -0.26
PMPCA-212ENST00000622209 CAMK2N2Q96S95 79 aa13.45□□□□□ -0.26
PMPCA-212ENST00000622209 PKHD1L1Q86WI1 4243 aa13.44□□□□□ -0.26
PMPCA-212ENST00000622209 CIRBPQ14011 172 aaKnown RBP13.44□□□□□ -0.26
PMPCA-212ENST00000622209 PMCHL1Q16048 86 aa13.44□□□□□ -0.26
PMPCA-212ENST00000622209 PDZD11Q5EBL8 140 aa13.44□□□□□ -0.26
PMPCA-212ENST00000622209 GEMIN7Q9H840 131 aaKnown RBP13.44□□□□□ -0.26
PMPCA-212ENST00000622209 A0A0J9YXV3 536 aa13.43□□□□□ -0.26
PMPCA-212ENST00000622209 OXTP01178 125 aa13.43□□□□□ -0.26
PMPCA-212ENST00000622209 BAGE3Q86Y29 109 aa13.43□□□□□ -0.26
PMPCA-212ENST00000622209 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.43□□□□□ -0.26
PMPCA-212ENST00000622209 TINCRA0A1B0GVN0 87 aa13.42□□□□□ -0.26
PMPCA-212ENST00000622209 SCO1O75880 301 aa13.42□□□□□ -0.26
PMPCA-212ENST00000622209 ATP5LO75964 103 aa13.42□□□□□ -0.26
PMPCA-212ENST00000622209 Q6ZRU5 148 aa13.42□□□□□ -0.26
PMPCA-212ENST00000622209 PANO1I0J062 215 aa13.41□□□□□ -0.26
PMPCA-212ENST00000622209 KIAA0087Q14695 138 aa13.4□□□□□ -0.26
PMPCA-212ENST00000622209 RNF151Q2KHN1 245 aa13.4□□□□□ -0.26
PMPCA-212ENST00000622209 SERTAD4-AS1Q5TG53 156 aa13.4□□□□□ -0.26
PMPCA-212ENST00000622209 CDKN2A-AS1Q9UH64 79 aa13.4□□□□□ -0.26
PMPCA-212ENST00000622209 NDUFA1O15239 70 aa13.39□□□□□ -0.27
PMPCA-212ENST00000622209 HNRNPA3P51991 378 aaKnown RBP13.39□□□□□ -0.27
PMPCA-212ENST00000622209 SPACA4Q8TDM5 124 aa13.39□□□□□ -0.27
PMPCA-212ENST00000622209 DPH3Q96FX2 82 aa13.39□□□□□ -0.27
PMPCA-212ENST00000622209 HSBP1O75506 76 aa13.38□□□□□ -0.27
PMPCA-212ENST00000622209 CHTF8P0CG12 524 aa13.38□□□□□ -0.27
PMPCA-212ENST00000622209 MRPL35Q9NZE8 188 aaKnown RBP13.38□□□□□ -0.27
PMPCA-212ENST00000622209 LINC00474Q9P2X8 69 aa13.38□□□□□ -0.27
PMPCA-212ENST00000622209 IGLV5-45A0A087WSX0 123 aa13.37□□□□□ -0.27
PMPCA-212ENST00000622209 LOC107984640A0A0U1RRK4 108 aa13.37□□□□□ -0.27
PMPCA-212ENST00000622209 NDUFA6P56556 154 aa13.37□□□□□ -0.27
PMPCA-212ENST00000622209 LINC00469Q8N7U9 141 aa13.37□□□□□ -0.27
PMPCA-212ENST00000622209 PACRGQ96M98 296 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms