RNA–Protein interactions for RNA: ENST00000621999.4

SCAMP1-207, Transcript of secretory carrier membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP1, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-207ENST00000621999 PYGO1Q9Y3Y4 419 aa8.73□□□□□ -1.01
SCAMP1-207ENST00000621999 NTM-AS1Q6ZSK4 140 aa8.73□□□□□ -1.01
SCAMP1-207ENST00000621999 ZNF575Q86XF7 245 aa8.73□□□□□ -1.01
SCAMP1-207ENST00000621999 PCP2Q8IVA1 136 aa8.73□□□□□ -1.01
SCAMP1-207ENST00000621999 TM2D2Q9BX73 214 aa8.73□□□□□ -1.01
SCAMP1-207ENST00000621999 Q9H8V8 135 aa8.73□□□□□ -1.01
SCAMP1-207ENST00000621999 FBN1P35555 2871 aaKnown RBP8.72□□□□□ -1.01
SCAMP1-207ENST00000621999 ESRGQ1W209 222 aa8.72□□□□□ -1.01
SCAMP1-207ENST00000621999 HIGD2BQ4VC39 106 aa8.72□□□□□ -1.01
SCAMP1-207ENST00000621999 CDC42SE2Q9NRR3 84 aa8.72□□□□□ -1.01
SCAMP1-207ENST00000621999 LECT2O14960 151 aa8.72□□□□□ -1.01
SCAMP1-207ENST00000621999 COPS9Q8WXC6 57 aa8.72□□□□□ -1.01
SCAMP1-207ENST00000621999 CAMK2N2Q96S95 79 aa8.72□□□□□ -1.01
SCAMP1-207ENST00000621999 ZNF469Q96JG9 3925 aaPredicted RBP8.72□□□□□ -1.01
SCAMP1-207ENST00000621999 IGIPA6NJ69 53 aa8.71□□□□□ -1.01
SCAMP1-207ENST00000621999 TMEM238C9JI98 176 aa8.71□□□□□ -1.01
SCAMP1-207ENST00000621999 PRSS47A8MTI9 375 aa8.71□□□□□ -1.02
SCAMP1-207ENST00000621999 EREGO14944 169 aa8.71□□□□□ -1.02
SCAMP1-207ENST00000621999 A0A096LNJ9 63 aa8.7□□□□□ -1.02
SCAMP1-207ENST00000621999 VAMP3Q15836 100 aa8.7□□□□□ -1.02
SCAMP1-207ENST00000621999 SPAG11BQ08648 103 aa8.7□□□□□ -1.02
SCAMP1-207ENST00000621999 LINC00587B1AMM8 73 aa8.7□□□□□ -1.02
SCAMP1-207ENST00000621999 LINC00959A0A1B0GUT2 108 aa8.7□□□□□ -1.02
SCAMP1-207ENST00000621999 SPATA12Q7Z6I5 190 aa8.7□□□□□ -1.02
SCAMP1-207ENST00000621999 LINC00526Q96FQ7 95 aa8.69□□□□□ -1.02
SCAMP1-207ENST00000621999 COX7B2Q8TF08 81 aa8.69□□□□□ -1.02
SCAMP1-207ENST00000621999 LOC107984156A0A0G2JMH3 177 aa8.68□□□□□ -1.02
SCAMP1-207ENST00000621999 TINCRA0A1B0GVN0 87 aa8.68□□□□□ -1.02
SCAMP1-207ENST00000621999 IGLC3P0DOY3 106 aa8.68□□□□□ -1.02
SCAMP1-207ENST00000621999 MIAQ16674 131 aa8.68□□□□□ -1.02
SCAMP1-207ENST00000621999 UFSP1Q6NVU6 142 aa8.68□□□□□ -1.02
SCAMP1-207ENST00000621999 ARL17AQ8IVW1 177 aa8.68□□□□□ -1.02
SCAMP1-207ENST00000621999 NHP2Q9NX24 153 aaKnown RBP8.68□□□□□ -1.02
SCAMP1-207ENST00000621999 SMIM13P0DJ93 91 aa8.68□□□□□ -1.02
SCAMP1-207ENST00000621999 TTC32Q5I0X7 151 aa8.68□□□□□ -1.02
SCAMP1-207ENST00000621999 SFTA2Q6UW10 78 aa8.68□□□□□ -1.02
SCAMP1-207ENST00000621999 LEPROTO15243 131 aa8.68□□□□□ -1.02
SCAMP1-207ENST00000621999 ZNF22P17026 224 aaPredicted RBP8.68□□□□□ -1.02
SCAMP1-207ENST00000621999 MUC7Q8TAX7 377 aa8.68□□□□□ -1.02
SCAMP1-207ENST00000621999 STAB2Q8WWQ8 2551 aa8.67□□□□□ -1.02
SCAMP1-207ENST00000621999 COX8AP10176 69 aa8.67□□□□□ -1.02
SCAMP1-207ENST00000621999 MRPS36P82909 103 aaKnown RBP8.67□□□□□ -1.02
SCAMP1-207ENST00000621999 ANK3Q12955 4377 aaKnown RBP8.66□□□□□ -1.02
SCAMP1-207ENST00000621999 SNCGO76070 127 aa8.66□□□□□ -1.02
SCAMP1-207ENST00000621999 Q8N3U1 123 aa8.66□□□□□ -1.02
SCAMP1-207ENST00000621999 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.66□□□□□ -1.02
SCAMP1-207ENST00000621999 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.66□□□□□ -1.02
SCAMP1-207ENST00000621999 LINC00612Q8N6U2 182 aa8.66□□□□□ -1.02
SCAMP1-207ENST00000621999 EDA2RQ9HAV5 297 aa8.66□□□□□ -1.02
SCAMP1-207ENST00000621999 TRAV8-4A0A0B4J246 113 aa8.66□□□□□ -1.02
SCAMP1-207ENST00000621999 IGHV1-58A0A0C4DH39 117 aa8.66□□□□□ -1.02
SCAMP1-207ENST00000621999 MRPL52Q86TS9 123 aaKnown RBP8.66□□□□□ -1.02
SCAMP1-207ENST00000621999 WWC2-AS2Q96NR7 200 aa8.66□□□□□ -1.02
SCAMP1-207ENST00000621999 GAGE2EQ4V326 116 aa8.65□□□□□ -1.02
SCAMP1-207ENST00000621999 GAGE2DQ9UEU5 116 aa8.65□□□□□ -1.02
SCAMP1-207ENST00000621999 RPL24P83731 157 aaKnown RBP8.65□□□□□ -1.02
SCAMP1-207ENST00000621999 CUBNO60494 3623 aa8.65□□□□□ -1.02
SCAMP1-207ENST00000621999 E9PLD3 99 aa8.65□□□□□ -1.03
SCAMP1-207ENST00000621999 H3BNG1 76 aa8.65□□□□□ -1.03
SCAMP1-207ENST00000621999 UBE2D1P51668 147 aa8.65□□□□□ -1.03
SCAMP1-207ENST00000621999 LINC00242Q5T6M2 205 aa8.65□□□□□ -1.03
SCAMP1-207ENST00000621999 CD164L2Q6UWJ8 174 aa8.65□□□□□ -1.03
SCAMP1-207ENST00000621999 DAND5Q8N907 189 aa8.65□□□□□ -1.03
SCAMP1-207ENST00000621999 COX11Q9Y6N1 276 aa8.65□□□□□ -1.03
SCAMP1-207ENST00000621999 NDUFA1O15239 70 aa8.64□□□□□ -1.03
SCAMP1-207ENST00000621999 HSD52Q0P140 79 aa8.64□□□□□ -1.03
SCAMP1-207ENST00000621999 S100A7L2Q5SY68 101 aa8.64□□□□□ -1.03
SCAMP1-207ENST00000621999 COL5A1-AS1Q5SY13 56 aa8.64□□□□□ -1.03
SCAMP1-207ENST00000621999 RPL18AQ02543 176 aaKnown RBP8.64□□□□□ -1.03
SCAMP1-207ENST00000621999 TIRAPP58753 221 aa8.63□□□□□ -1.03
SCAMP1-207ENST00000621999 A0A1B0GUV1 79 aa8.63□□□□□ -1.03
SCAMP1-207ENST00000621999 LINC00588Q9Y4M8 146 aa8.62□□□□□ -1.03
SCAMP1-207ENST00000621999 CSDC2Q9Y534 153 aaKnown RBP8.62□□□□□ -1.03
SCAMP1-207ENST00000621999 COX6CP09669 75 aa8.62□□□□□ -1.03
SCAMP1-207ENST00000621999 COX6A2Q02221 97 aa8.62□□□□□ -1.03
SCAMP1-207ENST00000621999 IGKV2D-26A0A0A0MRZ7 120 aa8.61□□□□□ -1.03
SCAMP1-207ENST00000621999 GAGE2BQ13066 116 aa8.61□□□□□ -1.03
SCAMP1-207ENST00000621999 TMEM223A0PJW6 202 aa8.61□□□□□ -1.03
SCAMP1-207ENST00000621999 C2orf82Q6UX34 121 aa8.61□□□□□ -1.03
SCAMP1-207ENST00000621999 TP73-AS1Q9UF72 201 aa8.61□□□□□ -1.03
SCAMP1-207ENST00000621999 HERV-K104P63124 156 aa8.6□□□□□ -1.03
SCAMP1-207ENST00000621999 BOD1L2Q8IYS8 172 aa8.6□□□□□ -1.03
SCAMP1-207ENST00000621999 NPSP0C0P6 89 aa8.6□□□□□ -1.03
SCAMP1-207ENST00000621999 AMELXQ99217 191 aa8.6□□□□□ -1.03
SCAMP1-207ENST00000621999 MRPS16Q9Y3D3 137 aaKnown RBP8.6□□□□□ -1.03
SCAMP1-207ENST00000621999 NFE4Q86UQ8 179 aa8.59□□□□□ -1.03
SCAMP1-207ENST00000621999 NAA38Q9BRA0 125 aaKnown RBP8.59□□□□□ -1.03
SCAMP1-207ENST00000621999 IGKV2-24A0A0C4DH68 120 aa8.59□□□□□ -1.03
SCAMP1-207ENST00000621999 LYRM7Q5U5X0 104 aa8.59□□□□□ -1.03
SCAMP1-207ENST00000621999 NKAPP1Q8N9T2 125 aa8.58□□□□□ -1.04
SCAMP1-207ENST00000621999 IGLV4-69A0A075B6H9 119 aa8.58□□□□□ -1.04
SCAMP1-207ENST00000621999 LINC01556Q5JQF7 62 aa8.58□□□□□ -1.04
SCAMP1-207ENST00000621999 PKD1L1Q8TDX9 2849 aa8.58□□□□□ -1.04
SCAMP1-207ENST00000621999 CXCL5P42830 114 aa8.57□□□□□ -1.04
SCAMP1-207ENST00000621999 MIR7-3HGQ8N6C7 128 aa8.57□□□□□ -1.04
SCAMP1-207ENST00000621999 KRTAP21-3Q3LHN1 58 aa8.57□□□□□ -1.04
SCAMP1-207ENST00000621999 MAPKAPK5-AS1Q8N8E1 139 aa8.56□□□□□ -1.04
SCAMP1-207ENST00000621999 C14orf177Q52M58 125 aa8.56□□□□□ -1.04
SCAMP1-207ENST00000621999 SYCNQ0VAF6 134 aa8.56□□□□□ -1.04
SCAMP1-207ENST00000621999 ERG28Q9UKR5 140 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms