RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 ALKBH7Q9BT30 221 aaPredicted RBP1.21□□□□□ -2.22
CPNE3-211ENST00000621526 CCDC32Q9BV29 185 aa1.21□□□□□ -2.22
CPNE3-211ENST00000621526 TIMM21Q9BVV7 248 aa1.21□□□□□ -2.22
CPNE3-211ENST00000621526 Q9H521 79 aa1.21□□□□□ -2.22
CPNE3-211ENST00000621526 VCX3AQ9NNX9 186 aa1.21□□□□□ -2.22
CPNE3-211ENST00000621526 ZNF706Q9Y5V0 76 aaPredicted RBP1.21□□□□□ -2.22
CPNE3-211ENST00000621526 DSTQ03001 7570 aaKnown RBP1.2□□□□□ -2.22
CPNE3-211ENST00000621526 XKRY2A2RUG3 117 aa1.2□□□□□ -2.22
CPNE3-211ENST00000621526 VCYO14598 125 aa1.2□□□□□ -2.22
CPNE3-211ENST00000621526 HMGB3O15347 200 aaKnown RBP1.2□□□□□ -2.22
CPNE3-211ENST00000621526 SIX6O95475 246 aa1.2□□□□□ -2.22
CPNE3-211ENST00000621526 IGLV6-57P01721 117 aa1.2□□□□□ -2.22
CPNE3-211ENST00000621526 CDC34P49427 236 aaPredicted RBP1.2□□□□□ -2.22
CPNE3-211ENST00000621526 LRRC37A5PQ49AS3 106 aa1.2□□□□□ -2.22
CPNE3-211ENST00000621526 LINC00483Q53H64 154 aa1.2□□□□□ -2.22
CPNE3-211ENST00000621526 C6orf226Q5I0X4 101 aa1.2□□□□□ -2.22
CPNE3-211ENST00000621526 C10orf91Q5T1B1 145 aa1.2□□□□□ -2.22
CPNE3-211ENST00000621526 BAGE2Q86Y30 109 aa1.2□□□□□ -2.22
CPNE3-211ENST00000621526 TMEM18Q96B42 140 aa1.2□□□□□ -2.22
CPNE3-211ENST00000621526 SEC22CQ9BRL7 303 aa1.2□□□□□ -2.22
CPNE3-211ENST00000621526 CNFNQ9BYD5 112 aa1.2□□□□□ -2.22
CPNE3-211ENST00000621526 ACTR3CQ9C0K3 210 aaPredicted RBP1.2□□□□□ -2.22
CPNE3-211ENST00000621526 TMEM126AQ9H061 195 aa1.2□□□□□ -2.22
CPNE3-211ENST00000621526 XAGE1AQ9HD64 81 aa1.2□□□□□ -2.22
CPNE3-211ENST00000621526 TMEM242Q9NWH2 141 aa1.2□□□□□ -2.22
CPNE3-211ENST00000621526 TNFSF18Q9UNG2 199 aa1.2□□□□□ -2.22
CPNE3-211ENST00000621526 C7orf77A4D0Y5 90 aa1.19□□□□□ -2.22
CPNE3-211ENST00000621526 C9orf92A6NGG3 77 aa1.19□□□□□ -2.22
CPNE3-211ENST00000621526 FAM74A7A6NL05 159 aa1.19□□□□□ -2.22
CPNE3-211ENST00000621526 CENPXA8MT69 81 aa1.19□□□□□ -2.22
CPNE3-211ENST00000621526 PPP1R2P9O14990 202 aa1.19□□□□□ -2.22
CPNE3-211ENST00000621526 ATP6V0CP27449 155 aa1.19□□□□□ -2.22
CPNE3-211ENST00000621526 CKS1BP61024 79 aa1.19□□□□□ -2.22
CPNE3-211ENST00000621526 PRLHP81277 87 aa1.19□□□□□ -2.22
CPNE3-211ENST00000621526 MRPS36P82909 103 aaKnown RBP1.19□□□□□ -2.22
CPNE3-211ENST00000621526 C6orf99Q4VX62 202 aa1.19□□□□□ -2.22
CPNE3-211ENST00000621526 C2orf82Q6UX34 121 aa1.19□□□□□ -2.22
CPNE3-211ENST00000621526 SMIM15Q7Z3B0 74 aa1.19□□□□□ -2.22
CPNE3-211ENST00000621526 FAM19A1Q7Z5A9 133 aa1.19□□□□□ -2.22
CPNE3-211ENST00000621526 STOML3Q8TAV4 291 aa1.19□□□□□ -2.22
CPNE3-211ENST00000621526 PSMG3Q9BT73 122 aaPredicted RBP1.19□□□□□ -2.22
CPNE3-211ENST00000621526 ST20Q9HBF5 79 aa1.19□□□□□ -2.22
CPNE3-211ENST00000621526 TRBV20-1A0A075B6N2 111 aa1.18□□□□□ -2.22
CPNE3-211ENST00000621526 TGIF2-C20orf24A0A0A6YYL0 155 aa1.18□□□□□ -2.22
CPNE3-211ENST00000621526 GAGE10A6NGK3 116 aa1.18□□□□□ -2.22
CPNE3-211ENST00000621526 F8VRH5 84 aa1.18□□□□□ -2.22
CPNE3-211ENST00000621526 INMT-MINDY4F8WBC2 141 aa1.18□□□□□ -2.22
CPNE3-211ENST00000621526 H0YIZ8 118 aa1.18□□□□□ -2.22
CPNE3-211ENST00000621526 M0R378 163 aa1.18□□□□□ -2.22
CPNE3-211ENST00000621526 TCAPO15273 167 aa1.18□□□□□ -2.22
CPNE3-211ENST00000621526 PPP1R17O96001 155 aa1.18□□□□□ -2.22
CPNE3-211ENST00000621526 PRSS2P07478 247 aa1.18□□□□□ -2.22
CPNE3-211ENST00000621526 NPSP0C0P6 89 aa1.18□□□□□ -2.22
CPNE3-211ENST00000621526 TWIST1Q15672 202 aa1.18□□□□□ -2.22
CPNE3-211ENST00000621526 PYDC2Q56P42 97 aa1.18□□□□□ -2.22
CPNE3-211ENST00000621526 Q5XG85 94 aa1.18□□□□□ -2.22
CPNE3-211ENST00000621526 Q6ZN92 141 aa1.18□□□□□ -2.22
CPNE3-211ENST00000621526 ATP11AUNQ6ZP68 121 aa1.18□□□□□ -2.22
CPNE3-211ENST00000621526 TMUB2Q71RG4 321 aa1.18□□□□□ -2.22
CPNE3-211ENST00000621526 Q8IZM0 81 aa1.18□□□□□ -2.22
CPNE3-211ENST00000621526 LINC00469Q8N7U9 141 aa1.18□□□□□ -2.22
CPNE3-211ENST00000621526 NRACQ8N912 160 aa1.18□□□□□ -2.22
CPNE3-211ENST00000621526 NKAPP1Q8N9T2 125 aa1.18□□□□□ -2.22
CPNE3-211ENST00000621526 SMCR5Q8TEV8 140 aa1.18□□□□□ -2.22
CPNE3-211ENST00000621526 FAM104AQ969W3 186 aa1.18□□□□□ -2.22
CPNE3-211ENST00000621526 RPL39LQ96EH5 51 aaKnown RBP1.18□□□□□ -2.22
CPNE3-211ENST00000621526 HIGD2AQ9BW72 106 aa1.18□□□□□ -2.22
CPNE3-211ENST00000621526 HSPB11Q9Y547 144 aa1.18□□□□□ -2.22
CPNE3-211ENST00000621526 IGKV2-28A0A075B6P5 120 aa1.17□□□□□ -2.22
CPNE3-211ENST00000621526 A6NN06 94 aa1.17□□□□□ -2.22
CPNE3-211ENST00000621526 IGKV2D-28P01615 120 aa1.17□□□□□ -2.22
CPNE3-211ENST00000621526 FCER1GP30273 86 aa1.17□□□□□ -2.22
CPNE3-211ENST00000621526 AKR1C3P42330 323 aa1.17□□□□□ -2.22
CPNE3-211ENST00000621526 CXCL5P42830 114 aa1.17□□□□□ -2.22
CPNE3-211ENST00000621526 HBBP68871 147 aa1.17□□□□□ -2.22
CPNE3-211ENST00000621526 RPL24P83731 157 aaKnown RBP1.17□□□□□ -2.22
CPNE3-211ENST00000621526 FAM19A3Q7Z5A8 133 aa1.17□□□□□ -2.22
CPNE3-211ENST00000621526 SMIM12Q96EX1 92 aa1.17□□□□□ -2.22
CPNE3-211ENST00000621526 C20orf166-AS1Q96NR2 134 aa1.17□□□□□ -2.22
CPNE3-211ENST00000621526 LIMD2Q9BT23 127 aa1.17□□□□□ -2.22
CPNE3-211ENST00000621526 TPPP3Q9BW30 176 aa1.17□□□□□ -2.22
CPNE3-211ENST00000621526 RNASE7Q9H1E1 156 aaKnown RBP1.17□□□□□ -2.22
CPNE3-211ENST00000621526 SPANXA1Q9NS26 97 aa1.17□□□□□ -2.22
CPNE3-211ENST00000621526 CTXND1A0A1B0GTU2 59 aa1.16□□□□□ -2.22
CPNE3-211ENST00000621526 CCDC160A6NGH7 325 aa1.16□□□□□ -2.22
CPNE3-211ENST00000621526 C5orf52A6NGY3 159 aa1.16□□□□□ -2.22
CPNE3-211ENST00000621526 PRSS47A8MTI9 375 aa1.16□□□□□ -2.22
CPNE3-211ENST00000621526 TMEM238C9JI98 176 aa1.16□□□□□ -2.22
CPNE3-211ENST00000621526 MPC2O95563 127 aa1.16□□□□□ -2.22
CPNE3-211ENST00000621526 PET100P0DJ07 73 aa1.16□□□□□ -2.22
CPNE3-211ENST00000621526 BTCP35070 178 aa1.16□□□□□ -2.22
CPNE3-211ENST00000621526 TAGLN2P37802 199 aaKnown RBP1.16□□□□□ -2.22
CPNE3-211ENST00000621526 DEFA3P59666 94 aa1.16□□□□□ -2.22
CPNE3-211ENST00000621526 CD164Q04900 197 aa1.16□□□□□ -2.22
CPNE3-211ENST00000621526 MOBPQ13875 183 aa1.16□□□□□ -2.22
CPNE3-211ENST00000621526 RNASE13Q5GAN3 156 aaKnown RBP1.16□□□□□ -2.22
CPNE3-211ENST00000621526 CST9LP1Q5W188 147 aa1.16□□□□□ -2.22
CPNE3-211ENST00000621526 GAGE2AQ6NT46 116 aa1.16□□□□□ -2.22
CPNE3-211ENST00000621526 Q75L30 129 aa1.16□□□□□ -2.22
CPNE3-211ENST00000621526 BIN3Q9NQY0 253 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms