RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 WFDC13Q8IUB5 93 aa5.36□□□□□ -1.55
COLCA1-205ENST00000620864 COL4A3Q01955 1670 aa5.36□□□□□ -1.55
COLCA1-205ENST00000620864 Q6ZQY7 126 aa5.36□□□□□ -1.55
COLCA1-205ENST00000620864 FAM30AQ9NZY2 134 aa5.36□□□□□ -1.55
COLCA1-205ENST00000620864 HIVEP3Q5T1R4 2406 aa5.36□□□□□ -1.55
COLCA1-205ENST00000620864 CRYGDP07320 174 aa5.36□□□□□ -1.55
COLCA1-205ENST00000620864 IGKV1D-37A0A075B6S9 117 aa5.35□□□□□ -1.55
COLCA1-205ENST00000620864 SLPIP03973 132 aa5.35□□□□□ -1.55
COLCA1-205ENST00000620864 IGHV4-31P0DP07 118 aa5.35□□□□□ -1.55
COLCA1-205ENST00000620864 TRBV6-8A0A0A6YYG3 113 aa5.35□□□□□ -1.55
COLCA1-205ENST00000620864 IGF1P05019 195 aa5.35□□□□□ -1.55
COLCA1-205ENST00000620864 P0C879 139 aa5.35□□□□□ -1.55
COLCA1-205ENST00000620864 CTSZQ9UBR2 303 aa5.35□□□□□ -1.55
COLCA1-205ENST00000620864 EXPH5Q8NEV8 1989 aa5.35□□□□□ -1.55
COLCA1-205ENST00000620864 M0QY20 66 aa5.35□□□□□ -1.55
COLCA1-205ENST00000620864 SYCNQ0VAF6 134 aa5.35□□□□□ -1.55
COLCA1-205ENST00000620864 C10orf25Q5T742 122 aa5.35□□□□□ -1.55
COLCA1-205ENST00000620864 H3BS24 57 aa5.35□□□□□ -1.55
COLCA1-205ENST00000620864 PRRC2AP48634 2157 aaKnown RBP5.35□□□□□ -1.55
COLCA1-205ENST00000620864 LINC01548A6NM66 108 aa5.35□□□□□ -1.55
COLCA1-205ENST00000620864 MAPKAPK5-AS1Q8N8E1 139 aa5.35□□□□□ -1.55
COLCA1-205ENST00000620864 LINC00574Q9H8X3 128 aa5.35□□□□□ -1.55
COLCA1-205ENST00000620864 NOTCH4Q99466 2003 aa5.35□□□□□ -1.55
COLCA1-205ENST00000620864 ZNF73O43830 326 aaPredicted RBP5.35□□□□□ -1.55
COLCA1-205ENST00000620864 M0R2T5 61 aa5.34□□□□□ -1.55
COLCA1-205ENST00000620864 SMIM11BQ8TCY0 68 aa5.34□□□□□ -1.55
COLCA1-205ENST00000620864 Q8IZM0 81 aa5.34□□□□□ -1.55
COLCA1-205ENST00000620864 IGLV4-69A0A075B6H9 119 aa5.34□□□□□ -1.55
COLCA1-205ENST00000620864 MAP6D1Q9H9H5 199 aa5.34□□□□□ -1.55
COLCA1-205ENST00000620864 IGLV1-47P01700 117 aa5.34□□□□□ -1.55
COLCA1-205ENST00000620864 GDF5OSQ5U4N7 250 aa5.34□□□□□ -1.55
COLCA1-205ENST00000620864 FSTL3O95633 263 aa5.34□□□□□ -1.56
COLCA1-205ENST00000620864 A0A1B0GW54 56 aa5.33□□□□□ -1.56
COLCA1-205ENST00000620864 ZNF503-AS2A6NEH8 195 aa5.33□□□□□ -1.56
COLCA1-205ENST00000620864 LINC00208Q96KT6 92 aa5.33□□□□□ -1.56
COLCA1-205ENST00000620864 A8MZ25 164 aa5.33□□□□□ -1.56
COLCA1-205ENST00000620864 ZNF80P51504 273 aaPredicted RBP5.33□□□□□ -1.56
COLCA1-205ENST00000620864 TMEM254Q8TBM7 123 aa5.33□□□□□ -1.56
COLCA1-205ENST00000620864 DSCAMO60469 2012 aa5.32□□□□□ -1.56
COLCA1-205ENST00000620864 PLAC8L1A1L4L8 177 aa5.32□□□□□ -1.56
COLCA1-205ENST00000620864 IGLV2-14P01704 120 aa5.32□□□□□ -1.56
COLCA1-205ENST00000620864 CRYGAP11844 174 aa5.32□□□□□ -1.56
COLCA1-205ENST00000620864 SPAG11AQ6PDA7 123 aa5.32□□□□□ -1.56
COLCA1-205ENST00000620864 Q8N814 137 aa5.32□□□□□ -1.56
COLCA1-205ENST00000620864 CNFNQ9BYD5 112 aa5.32□□□□□ -1.56
COLCA1-205ENST00000620864 LY6LH3BQJ8 138 aa5.31□□□□□ -1.56
COLCA1-205ENST00000620864 CEMP1Q6PRD7 247 aaPredicted RBP5.31□□□□□ -1.56
COLCA1-205ENST00000620864 H3BPC8 53 aa5.31□□□□□ -1.56
COLCA1-205ENST00000620864 SPINK6Q6UWN8 80 aa5.31□□□□□ -1.56
COLCA1-205ENST00000620864 Q8N3U1 123 aa5.31□□□□□ -1.56
COLCA1-205ENST00000620864 LTBP2Q14767 1821 aa5.31□□□□□ -1.56
COLCA1-205ENST00000620864 IGLV5-52A0A0A0MRZ9 124 aa5.31□□□□□ -1.56
COLCA1-205ENST00000620864 C8orf87E5RJ46 101 aa5.31□□□□□ -1.56
COLCA1-205ENST00000620864 K7EQG2 157 aa5.31□□□□□ -1.56
COLCA1-205ENST00000620864 SPINT4Q6UDR6 99 aa5.31□□□□□ -1.56
COLCA1-205ENST00000620864 Q8N6K4 173 aa5.31□□□□□ -1.56
COLCA1-205ENST00000620864 TP53AIP1Q9HCN2 124 aa5.3□□□□□ -1.56
COLCA1-205ENST00000620864 EPM2AB3EWF7 344 aa5.3□□□□□ -1.56
COLCA1-205ENST00000620864 C22orf34Q6ZV56 151 aa5.3□□□□□ -1.56
COLCA1-205ENST00000620864 POM121L12Q8N7R1 296 aa5.3□□□□□ -1.56
COLCA1-205ENST00000620864 TP53TG3Q9ULZ0 132 aa5.3□□□□□ -1.56
COLCA1-205ENST00000620864 H0Y9P7 68 aa5.3□□□□□ -1.56
COLCA1-205ENST00000620864 TSHBP01222 138 aa5.3□□□□□ -1.56
COLCA1-205ENST00000620864 CHCHD7Q9BUK0 85 aa5.3□□□□□ -1.56
COLCA1-205ENST00000620864 IGHV4-30-4P0DP06 118 aa5.29□□□□□ -1.56
COLCA1-205ENST00000620864 RITA1Q96K30 269 aa5.29□□□□□ -1.56
COLCA1-205ENST00000620864 WISP2O76076 250 aa5.29□□□□□ -1.56
COLCA1-205ENST00000620864 COL5A1P20908 1838 aaPredicted RBP5.29□□□□□ -1.56
COLCA1-205ENST00000620864 C1orf137Q5JT78 98 aa5.29□□□□□ -1.56
COLCA1-205ENST00000620864 LELP1Q5T871 98 aa5.29□□□□□ -1.56
COLCA1-205ENST00000620864 BEAN1Q3B7T3 259 aa5.29□□□□□ -1.56
COLCA1-205ENST00000620864 A6NDX4 124 aa5.28□□□□□ -1.56
COLCA1-205ENST00000620864 Q6ZTI0 123 aa5.28□□□□□ -1.56
COLCA1-205ENST00000620864 AGRNO00468 2067 aa5.28□□□□□ -1.56
COLCA1-205ENST00000620864 TRAV10A0A0B4J240 114 aa5.28□□□□□ -1.56
COLCA1-205ENST00000620864 HCG22E2RYF7 251 aa5.28□□□□□ -1.56
COLCA1-205ENST00000620864 CPAMD8Q8IZJ3 1885 aa5.28□□□□□ -1.56
COLCA1-205ENST00000620864 POLR2KP53803 58 aaKnown RBP5.28□□□□□ -1.56
COLCA1-205ENST00000620864 LINC01561Q8N1V8 128 aa5.28□□□□□ -1.56
COLCA1-205ENST00000620864 RAI1Q7Z5J4 1906 aaPredicted RBP5.28□□□□□ -1.56
COLCA1-205ENST00000620864 EGFEM1PQ0D2K5 195 aa5.27□□□□□ -1.57
COLCA1-205ENST00000620864 LINC00482Q8N8I6 264 aa5.27□□□□□ -1.57
COLCA1-205ENST00000620864 ODF3BA8MYP8 253 aa5.27□□□□□ -1.57
COLCA1-205ENST00000620864 TNFRSF13BO14836 293 aaPredicted RBP5.27□□□□□ -1.57
COLCA1-205ENST00000620864 RETNLBQ9BQ08 111 aa5.27□□□□□ -1.57
COLCA1-205ENST00000620864 XAGE1AQ9HD64 81 aa5.27□□□□□ -1.57
COLCA1-205ENST00000620864 SPRNQ5BIV9 151 aa5.27□□□□□ -1.57
COLCA1-205ENST00000620864 KRTAP10-9P60411 292 aa5.26□□□□□ -1.57
COLCA1-205ENST00000620864 UNQ9165/PRO28630Q6UXU0 137 aa5.26□□□□□ -1.57
COLCA1-205ENST00000620864 BBC3Q96PG8 261 aaPredicted RBP5.26□□□□□ -1.57
COLCA1-205ENST00000620864 LINC00846Q9NV44 126 aa5.26□□□□□ -1.57
COLCA1-205ENST00000620864 LINC00959A0A1B0GUT2 108 aa5.26□□□□□ -1.57
COLCA1-205ENST00000620864 LINC01547P58512 204 aaPredicted RBP5.26□□□□□ -1.57
COLCA1-205ENST00000620864 REG3GQ6UW15 175 aa5.26□□□□□ -1.57
COLCA1-205ENST00000620864 A0A1B0GU69 56 aa5.26□□□□□ -1.57
COLCA1-205ENST00000620864 IGLV2-11P01706 119 aa5.26□□□□□ -1.57
COLCA1-205ENST00000620864 FBXL19-AS1Q494R0 122 aa5.26□□□□□ -1.57
COLCA1-205ENST00000620864 ZNF702PQ9H963 129 aa5.26□□□□□ -1.57
COLCA1-205ENST00000620864 ACYP2P14621 99 aa5.26□□□□□ -1.57
COLCA1-205ENST00000620864 ZNF462Q96JM2 2506 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms