RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 LECT2O14960 151 aa5.1□□□□□ -1.59
NEDD9-216ENST00000620854 RPL32P62910 135 aaKnown RBP5.1□□□□□ -1.59
NEDD9-216ENST00000620854 MIR7-3HGQ8N6C7 128 aa5.09□□□□□ -1.59
NEDD9-216ENST00000620854 DCANP1Q8TF63 244 aa5.09□□□□□ -1.59
NEDD9-216ENST00000620854 CFAP46Q8IYW2 2715 aa5.09□□□□□ -1.59
NEDD9-216ENST00000620854 INAFM1C9JVW0 142 aa5.09□□□□□ -1.59
NEDD9-216ENST00000620854 GYPEP15421 78 aa5.09□□□□□ -1.59
NEDD9-216ENST00000620854 CDKN2A-AS1Q9UH64 79 aa5.09□□□□□ -1.59
NEDD9-216ENST00000620854 IGHV1-58A0A0C4DH39 117 aa5.09□□□□□ -1.6
NEDD9-216ENST00000620854 NDUFA7O95182 113 aa5.09□□□□□ -1.6
NEDD9-216ENST00000620854 AVPP01185 164 aa5.09□□□□□ -1.6
NEDD9-216ENST00000620854 TRACP01848 142 aa5.09□□□□□ -1.6
NEDD9-216ENST00000620854 ATP5G1P05496 136 aa5.09□□□□□ -1.6
NEDD9-216ENST00000620854 MED14OSP0DP75 135 aa5.09□□□□□ -1.6
NEDD9-216ENST00000620854 MRPL23Q16540 153 aaKnown RBP5.09□□□□□ -1.6
NEDD9-216ENST00000620854 FAM19A4Q96LR4 140 aa5.09□□□□□ -1.6
NEDD9-216ENST00000620854 F8P00451 2351 aa5.08□□□□□ -1.6
NEDD9-216ENST00000620854 TRBV30A0A0K0K1B3 111 aa5.08□□□□□ -1.6
NEDD9-216ENST00000620854 A0A1B0GX51 115 aa5.08□□□□□ -1.6
NEDD9-216ENST00000620854 DEFB105AQ8NG35 78 aa5.08□□□□□ -1.6
NEDD9-216ENST00000620854 DSCR8Q96T75 97 aa5.08□□□□□ -1.6
NEDD9-216ENST00000620854 Q6ZSN1 163 aa5.08□□□□□ -1.6
NEDD9-216ENST00000620854 K7EMT4 169 aa5.07□□□□□ -1.6
NEDD9-216ENST00000620854 K7EQD1 137 aa5.07□□□□□ -1.6
NEDD9-216ENST00000620854 PRB2P02812 416 aaPredicted RBP5.07□□□□□ -1.6
NEDD9-216ENST00000620854 CITED2Q99967 270 aaPredicted RBP5.07□□□□□ -1.6
NEDD9-216ENST00000620854 ORMDL1Q9P0S3 153 aa5.07□□□□□ -1.6
NEDD9-216ENST00000620854 USP24Q9UPU5 2620 aa5.07□□□□□ -1.6
NEDD9-216ENST00000620854 COX7B2Q8TF08 81 aa5.07□□□□□ -1.6
NEDD9-216ENST00000620854 LITAFQ99732 161 aa5.07□□□□□ -1.6
NEDD9-216ENST00000620854 TRBV6-5A0A0K0K1A5 114 aa5.07□□□□□ -1.6
NEDD9-216ENST00000620854 PSCAO43653 123 aa5.07□□□□□ -1.6
NEDD9-216ENST00000620854 LY6G6DO95868 133 aa5.07□□□□□ -1.6
NEDD9-216ENST00000620854 HELZ2Q9BYK8 2649 aaKnown RBP5.07□□□□□ -1.6
NEDD9-216ENST00000620854 Q6ZTI0 123 aa5.07□□□□□ -1.6
NEDD9-216ENST00000620854 NKAPP1Q8N9T2 125 aa5.07□□□□□ -1.6
NEDD9-216ENST00000620854 C9orf85Q96MD7 179 aa5.07□□□□□ -1.6
NEDD9-216ENST00000620854 LINC00467Q9BRT7 94 aa5.07□□□□□ -1.6
NEDD9-216ENST00000620854 F8WEM9 126 aa5.06□□□□□ -1.6
NEDD9-216ENST00000620854 IGHV4-28A0A0C4DH34 117 aa5.06□□□□□ -1.6
NEDD9-216ENST00000620854 H3BT86 120 aa5.06□□□□□ -1.6
NEDD9-216ENST00000620854 RBM3P98179 157 aaKnown RBP5.06□□□□□ -1.6
NEDD9-216ENST00000620854 RBMY1FQ15415 496 aaKnown RBP5.06□□□□□ -1.6
NEDD9-216ENST00000620854 Q8N2B8 174 aa5.06□□□□□ -1.6
NEDD9-216ENST00000620854 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.06□□□□□ -1.6
NEDD9-216ENST00000620854 C14orf132Q9NPU4 83 aa5.06□□□□□ -1.6
NEDD9-216ENST00000620854 MIAQ16674 131 aa5.06□□□□□ -1.6
NEDD9-216ENST00000620854 PIK3CD-AS1Q5SR53 167 aa5.06□□□□□ -1.6
NEDD9-216ENST00000620854 C4orf3Q8WVX3 66 aa5.06□□□□□ -1.6
NEDD9-216ENST00000620854 IGKV2D-24A0A075B6R9 120 aa5.05□□□□□ -1.6
NEDD9-216ENST00000620854 COX6A2Q02221 97 aa5.05□□□□□ -1.6
NEDD9-216ENST00000620854 UBE2DNLQ8IWF7 75 aa5.05□□□□□ -1.6
NEDD9-216ENST00000620854 GCN1Q92616 2671 aaKnown RBP5.05□□□□□ -1.6
NEDD9-216ENST00000620854 hADV29S1A0JD25 119 aa5.05□□□□□ -1.6
NEDD9-216ENST00000620854 DAZ2Q13117 558 aaKnown RBP5.05□□□□□ -1.6
NEDD9-216ENST00000620854 DAZ4Q86SG3 579 aaKnown RBP5.05□□□□□ -1.6
NEDD9-216ENST00000620854 FAM104AQ969W3 186 aa5.05□□□□□ -1.6
NEDD9-216ENST00000620854 DAZ3Q9NR90 486 aaKnown RBP5.05□□□□□ -1.6
NEDD9-216ENST00000620854 KLK5Q9Y337 293 aaPredicted RBP5.05□□□□□ -1.6
NEDD9-216ENST00000620854 LST1O00453 97 aa5.05□□□□□ -1.6
NEDD9-216ENST00000620854 MRPS36P82909 103 aaKnown RBP5.05□□□□□ -1.6
NEDD9-216ENST00000620854 C9orf66Q5T8R8 295 aa5.05□□□□□ -1.6
NEDD9-216ENST00000620854 K7EQG2 157 aa5.04□□□□□ -1.6
NEDD9-216ENST00000620854 NCR3O14931 201 aa5.04□□□□□ -1.6
NEDD9-216ENST00000620854 H0YGX0 51 aa5.04□□□□□ -1.6
NEDD9-216ENST00000620854 COX7A2LO14548 114 aa5.04□□□□□ -1.6
NEDD9-216ENST00000620854 ACYP1P07311 99 aa5.04□□□□□ -1.6
NEDD9-216ENST00000620854 DEFB135Q30KP9 77 aa5.04□□□□□ -1.6
NEDD9-216ENST00000620854 MAP6D1Q9H9H5 199 aa5.04□□□□□ -1.6
NEDD9-216ENST00000620854 SLPIP03973 132 aa5.04□□□□□ -1.6
NEDD9-216ENST00000620854 SMR3AQ99954 134 aa5.03□□□□□ -1.6
NEDD9-216ENST00000620854 PPDPFQ9H3Y8 114 aa5.03□□□□□ -1.6
NEDD9-216ENST00000620854 ZNF702PQ9H963 129 aa5.03□□□□□ -1.6
NEDD9-216ENST00000620854 APOC4P55056 127 aa5.03□□□□□ -1.6
NEDD9-216ENST00000620854 C18orf65Q6ZTR6 163 aa5.03□□□□□ -1.6
NEDD9-216ENST00000620854 MRAPQ8TCY5 172 aa5.03□□□□□ -1.6
NEDD9-216ENST00000620854 KLK12Q9UKR0 248 aa5.03□□□□□ -1.6
NEDD9-216ENST00000620854 APCP25054 2843 aa5.03□□□□□ -1.6
NEDD9-216ENST00000620854 LOC107984640A0A0U1RRK4 108 aa5.03□□□□□ -1.6
NEDD9-216ENST00000620854 HILS1P60008 231 aa5.03□□□□□ -1.6
NEDD9-216ENST00000620854 UBE2D4Q9Y2X8 147 aa5.03□□□□□ -1.6
NEDD9-216ENST00000620854 PSMB8P28062 276 aa5.02□□□□□ -1.61
NEDD9-216ENST00000620854 KLK9Q2XQG4 91 aa5.02□□□□□ -1.61
NEDD9-216ENST00000620854 LINC00308Q8TCZ7 52 aa5.02□□□□□ -1.61
NEDD9-216ENST00000620854 SMCR5Q8TEV8 140 aa5.02□□□□□ -1.61
NEDD9-216ENST00000620854 C16orf74Q96GX8 76 aa5.02□□□□□ -1.61
NEDD9-216ENST00000620854 CAMK2N2Q96S95 79 aa5.02□□□□□ -1.61
NEDD9-216ENST00000620854 LINC00694P0DN24 101 aa5.02□□□□□ -1.61
NEDD9-216ENST00000620854 SDIM1Q6ZPB5 146 aa5.02□□□□□ -1.61
NEDD9-216ENST00000620854 CHCHD7Q9BUK0 85 aa5.02□□□□□ -1.61
NEDD9-216ENST00000620854 IGLV1-40P01703 118 aa5.02□□□□□ -1.61
NEDD9-216ENST00000620854 RNF152Q8N8N0 203 aa5.02□□□□□ -1.61
NEDD9-216ENST00000620854 LINC01006Q8NI28 216 aa5.02□□□□□ -1.61
NEDD9-216ENST00000620854 TRAV23DV6A0A075B6W5 121 aa5.02□□□□□ -1.61
NEDD9-216ENST00000620854 SOSTDC1Q6X4U4 206 aa5.02□□□□□ -1.61
NEDD9-216ENST00000620854 ATOX1O00244 68 aa5.01□□□□□ -1.61
NEDD9-216ENST00000620854 OXLD1Q5BKU9 147 aa5.01□□□□□ -1.61
NEDD9-216ENST00000620854 Q6Q795 121 aa5.01□□□□□ -1.61
NEDD9-216ENST00000620854 SPANXDQ9BXN6 97 aa5.01□□□□□ -1.61
NEDD9-216ENST00000620854 SPANXCQ9NY87 97 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms