RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 COX7B2Q8TF08 81 aa13.85□□□□□ -0.19
PDLIM3-212ENST00000620787 TMEM126AQ9H061 195 aa13.83□□□□□ -0.19
PDLIM3-212ENST00000620787 FBN2P35556 2912 aa13.83□□□□□ -0.2
PDLIM3-212ENST00000620787 C5orf38Q86SI9 138 aa13.83□□□□□ -0.2
PDLIM3-212ENST00000620787 GAGE2AQ6NT46 116 aa13.82□□□□□ -0.2
PDLIM3-212ENST00000620787 SND1-IT1Q9HBX3 110 aa13.82□□□□□ -0.2
PDLIM3-212ENST00000620787 POLQO75417 2590 aa13.82□□□□□ -0.2
PDLIM3-212ENST00000620787 NOP10Q9NPE3 64 aaKnown RBP13.82□□□□□ -0.2
PDLIM3-212ENST00000620787 MYO9AB2RTY4 2548 aa13.82□□□□□ -0.2
PDLIM3-212ENST00000620787 AKAP9Q99996 3911 aa13.81□□□□□ -0.2
PDLIM3-212ENST00000620787 TRAV25A0A0B4J276 109 aa13.81□□□□□ -0.2
PDLIM3-212ENST00000620787 CXCL5P42830 114 aa13.81□□□□□ -0.2
PDLIM3-212ENST00000620787 CHD6Q8TD26 2715 aa13.81□□□□□ -0.2
PDLIM3-212ENST00000620787 LOC100131303A0A0U1RQF7 123 aa13.8□□□□□ -0.2
PDLIM3-212ENST00000620787 A0A087WYN8 130 aa13.8□□□□□ -0.2
PDLIM3-212ENST00000620787 C3orf22Q8N5N4 141 aa13.8□□□□□ -0.2
PDLIM3-212ENST00000620787 SMIM11BQ8TCY0 68 aa13.8□□□□□ -0.2
PDLIM3-212ENST00000620787 TOMM7Q9P0U1 55 aa13.79□□□□□ -0.2
PDLIM3-212ENST00000620787 CACNA1AO00555 2505 aa13.79□□□□□ -0.2
PDLIM3-212ENST00000620787 ATP5G1P05496 136 aa13.78□□□□□ -0.2
PDLIM3-212ENST00000620787 OVOL2Q9BRP0 275 aa13.78□□□□□ -0.2
PDLIM3-212ENST00000620787 TEX15Q9BXT5 2789 aa13.78□□□□□ -0.2
PDLIM3-212ENST00000620787 PLAC8L1A1L4L8 177 aa13.78□□□□□ -0.2
PDLIM3-212ENST00000620787 C9orf129Q5T035 196 aaKnown RBP13.78□□□□□ -0.2
PDLIM3-212ENST00000620787 WNK1Q9H4A3 2382 aa13.77□□□□□ -0.2
PDLIM3-212ENST00000620787 CCL18P55774 89 aa13.77□□□□□ -0.21
PDLIM3-212ENST00000620787 C2CD3Q4AC94 2353 aa13.77□□□□□ -0.21
PDLIM3-212ENST00000620787 UQCRQO14949 82 aa13.76□□□□□ -0.21
PDLIM3-212ENST00000620787 LINC00158P58513 81 aa13.76□□□□□ -0.21
PDLIM3-212ENST00000620787 C9orf153Q5TBE3 101 aa13.76□□□□□ -0.21
PDLIM3-212ENST00000620787 GIG44P09565 113 aaPredicted RBP13.76□□□□□ -0.21
PDLIM3-212ENST00000620787 NOTCH3Q9UM47 2321 aa13.75□□□□□ -0.21
PDLIM3-212ENST00000620787 IGKV3OR2-268A0A0C4DH90 116 aa13.75□□□□□ -0.21
PDLIM3-212ENST00000620787 DNAL4O96015 105 aa13.75□□□□□ -0.21
PDLIM3-212ENST00000620787 IGSF10Q6WRI0 2623 aa13.75□□□□□ -0.21
PDLIM3-212ENST00000620787 IGLV4-60A0A075B6I1 120 aa13.75□□□□□ -0.21
PDLIM3-212ENST00000620787 IGHV3OR16-9A0A0B4J2B5 98 aa13.74□□□□□ -0.21
PDLIM3-212ENST00000620787 TRBV6-4A0A1B0GX49 114 aa13.74□□□□□ -0.21
PDLIM3-212ENST00000620787 HIST1H4AP62805 103 aaKnown RBP13.74□□□□□ -0.21
PDLIM3-212ENST00000620787 LINC00526Q96FQ7 95 aa13.74□□□□□ -0.21
PDLIM3-212ENST00000620787 TRGV2A0A075B6R0 118 aa13.73□□□□□ -0.21
PDLIM3-212ENST00000620787 OBSCN-AS1Q96MR7 158 aa13.73□□□□□ -0.21
PDLIM3-212ENST00000620787 C14orf132Q9NPU4 83 aa13.73□□□□□ -0.21
PDLIM3-212ENST00000620787 A0A1W2PRX2 142 aa13.73□□□□□ -0.21
PDLIM3-212ENST00000620787 IBA57-AS1B1ANH7 110 aa13.73□□□□□ -0.21
PDLIM3-212ENST00000620787 H0YGX0 51 aa13.73□□□□□ -0.21
PDLIM3-212ENST00000620787 C16orf74Q96GX8 76 aa13.73□□□□□ -0.21
PDLIM3-212ENST00000620787 MYO18BQ8IUG5 2567 aa13.72□□□□□ -0.21
PDLIM3-212ENST00000620787 LRRC75A-AS1Q8N1F1 130 aa13.72□□□□□ -0.21
PDLIM3-212ENST00000620787 C11orf44Q8N8P7 122 aa13.72□□□□□ -0.21
PDLIM3-212ENST00000620787 C2orf48Q96LS8 159 aa13.71□□□□□ -0.22
PDLIM3-212ENST00000620787 CENPEQ02224 2701 aa13.7□□□□□ -0.22
PDLIM3-212ENST00000620787 A0A087WZ39 114 aa13.7□□□□□ -0.22
PDLIM3-212ENST00000620787 CCL24O00175 119 aa13.7□□□□□ -0.22
PDLIM3-212ENST00000620787 TRBV6-8A0A0A6YYG3 113 aa13.69□□□□□ -0.22
PDLIM3-212ENST00000620787 PFN2P35080 140 aa13.69□□□□□ -0.22
PDLIM3-212ENST00000620787 TRGV4A0A0C4DH28 118 aa13.69□□□□□ -0.22
PDLIM3-212ENST00000620787 LECT2O14960 151 aa13.69□□□□□ -0.22
PDLIM3-212ENST00000620787 COX7CP15954 63 aa13.69□□□□□ -0.22
PDLIM3-212ENST00000620787 KLK5Q9Y337 293 aaPredicted RBP13.69□□□□□ -0.22
PDLIM3-212ENST00000620787 SETXQ7Z333 2677 aaKnown RBP13.69□□□□□ -0.22
PDLIM3-212ENST00000620787 WFDC10AQ9H1F0 79 aa13.68□□□□□ -0.22
PDLIM3-212ENST00000620787 ACACBO00763 2458 aa13.68□□□□□ -0.22
PDLIM3-212ENST00000620787 PLA2G2AP14555 144 aa13.67□□□□□ -0.22
PDLIM3-212ENST00000620787 KRTAP10-9P60411 292 aa13.67□□□□□ -0.22
PDLIM3-212ENST00000620787 PAX4O43316 350 aa13.66□□□□□ -0.22
PDLIM3-212ENST00000620787 FHL2Q14192 279 aa13.66□□□□□ -0.22
PDLIM3-212ENST00000620787 LINC00846Q9NV44 126 aa13.66□□□□□ -0.22
PDLIM3-212ENST00000620787 EPG5Q9HCE0 2579 aa13.66□□□□□ -0.22
PDLIM3-212ENST00000620787 ATOX1O00244 68 aa13.66□□□□□ -0.22
PDLIM3-212ENST00000620787 LY6G6DO95868 133 aa13.65□□□□□ -0.22
PDLIM3-212ENST00000620787 RPL35AP18077 110 aaKnown RBP13.65□□□□□ -0.22
PDLIM3-212ENST00000620787 Q6JHZ5 121 aa13.65□□□□□ -0.22
PDLIM3-212ENST00000620787 CUBNO60494 3623 aa13.65□□□□□ -0.22
PDLIM3-212ENST00000620787 NCR3O14931 201 aa13.65□□□□□ -0.22
PDLIM3-212ENST00000620787 TMEM86BQ8N661 226 aa13.65□□□□□ -0.22
PDLIM3-212ENST00000620787 OR13C6PQ8NH95 151 aa13.65□□□□□ -0.22
PDLIM3-212ENST00000620787 TLN2Q9Y4G6 2542 aa13.65□□□□□ -0.22
PDLIM3-212ENST00000620787 JMJD1CQ15652 2540 aa13.64□□□□□ -0.23
PDLIM3-212ENST00000620787 NBPF19A0A087WUL8 3843 aa13.64□□□□□ -0.23
PDLIM3-212ENST00000620787 SLPIP03973 132 aa13.64□□□□□ -0.23
PDLIM3-212ENST00000620787 CSNK1G2-AS1Q8NCQ2 148 aa13.64□□□□□ -0.23
PDLIM3-212ENST00000620787 IGKV3D-7A0A0C4DH55 119 aa13.64□□□□□ -0.23
PDLIM3-212ENST00000620787 LINC00959A0A1B0GUT2 108 aa13.63□□□□□ -0.23
PDLIM3-212ENST00000620787 PTPN13Q12923 2485 aa13.63□□□□□ -0.23
PDLIM3-212ENST00000620787 C11orf68Q9H3H3 251 aaKnown RBP13.63□□□□□ -0.23
PDLIM3-212ENST00000620787 FAM208BQ5VWN6 2430 aa13.62□□□□□ -0.23
PDLIM3-212ENST00000620787 DNAJC9-AS1A6NH13 148 aa13.62□□□□□ -0.23
PDLIM3-212ENST00000620787 CRYGAP11844 174 aa13.62□□□□□ -0.23
PDLIM3-212ENST00000620787 RPL18AQ02543 176 aaKnown RBP13.62□□□□□ -0.23
PDLIM3-212ENST00000620787 SS18Q15532 418 aa13.62□□□□□ -0.23
PDLIM3-212ENST00000620787 C19orf73Q9NVV2 129 aa13.62□□□□□ -0.23
PDLIM3-212ENST00000620787 CMC4P56277 68 aaPredicted RBP13.61□□□□□ -0.23
PDLIM3-212ENST00000620787 DEFB113Q30KQ7 82 aa13.61□□□□□ -0.23
PDLIM3-212ENST00000620787 LRRK2Q5S007 2527 aa13.61□□□□□ -0.23
PDLIM3-212ENST00000620787 NIPBLQ6KC79 2804 aaeCLIP13.61□□□□□ -0.23
PDLIM3-212ENST00000620787 ZFYVE26Q68DK2 2539 aa13.6□□□□□ -0.23
PDLIM3-212ENST00000620787 C6orf226Q5I0X4 101 aa13.6□□□□□ -0.23
PDLIM3-212ENST00000620787 ZNF469Q96JG9 3925 aaPredicted RBP13.6□□□□□ -0.23
PDLIM3-212ENST00000620787 NAV2Q8IVL1 2488 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms