RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 POLR2KP53803 58 aaKnown RBP8.21□□□□□ -1.09
CLIP1-219ENST00000620786 C10orf25Q5T742 122 aa8.21□□□□□ -1.1
CLIP1-219ENST00000620786 FSHBP01225 129 aa8.21□□□□□ -1.1
CLIP1-219ENST00000620786 C6orf223Q8N319 242 aa8.21□□□□□ -1.1
CLIP1-219ENST00000620786 G3V4G9 280 aa8.21□□□□□ -1.1
CLIP1-219ENST00000620786 NHLRC4P0CG21 123 aaPredicted RBP8.21□□□□□ -1.1
CLIP1-219ENST00000620786 TRBV30A0A0K0K1B3 111 aa8.2□□□□□ -1.1
CLIP1-219ENST00000620786 CHCHD7Q9BUK0 85 aa8.2□□□□□ -1.1
CLIP1-219ENST00000620786 FHL2Q14192 279 aa8.2□□□□□ -1.1
CLIP1-219ENST00000620786 SMIM11BQ8TCY0 68 aa8.2□□□□□ -1.1
CLIP1-219ENST00000620786 CIRBP-AS1Q8TBR5 109 aa8.19□□□□□ -1.1
CLIP1-219ENST00000620786 WFDC13Q8IUB5 93 aa8.19□□□□□ -1.1
CLIP1-219ENST00000620786 REG3GQ6UW15 175 aa8.19□□□□□ -1.1
CLIP1-219ENST00000620786 UNQ6190/PRO20217Q6UXQ8 127 aa8.19□□□□□ -1.1
CLIP1-219ENST00000620786 ACACBO00763 2458 aa8.19□□□□□ -1.1
CLIP1-219ENST00000620786 GAS8-AS1O95177 125 aa8.19□□□□□ -1.1
CLIP1-219ENST00000620786 TP73-AS1Q9UF72 201 aa8.19□□□□□ -1.1
CLIP1-219ENST00000620786 PTPN13Q12923 2485 aa8.19□□□□□ -1.1
CLIP1-219ENST00000620786 ATP5EP2Q5VTU8 51 aa8.18□□□□□ -1.1
CLIP1-219ENST00000620786 ADAMTS20P59510 1910 aa8.18□□□□□ -1.1
CLIP1-219ENST00000620786 PRRC2AP48634 2157 aaKnown RBP8.18□□□□□ -1.1
CLIP1-219ENST00000620786 EGFEM1PQ0D2K5 195 aa8.18□□□□□ -1.1
CLIP1-219ENST00000620786 C3orf22Q8N5N4 141 aa8.17□□□□□ -1.1
CLIP1-219ENST00000620786 MUC7Q8TAX7 377 aa8.17□□□□□ -1.1
CLIP1-219ENST00000620786 LINC01556Q5JQF7 62 aa8.17□□□□□ -1.1
CLIP1-219ENST00000620786 C1orf137Q5JT78 98 aa8.17□□□□□ -1.1
CLIP1-219ENST00000620786 MRPS12O15235 138 aaKnown RBP8.17□□□□□ -1.1
CLIP1-219ENST00000620786 C9orf116Q5BN46 136 aaPredicted RBP8.17□□□□□ -1.1
CLIP1-219ENST00000620786 NOTCH2Q04721 2471 aa8.17□□□□□ -1.1
CLIP1-219ENST00000620786 ZNF580Q9UK33 172 aa8.16□□□□□ -1.1
CLIP1-219ENST00000620786 TANC2Q9HCD6 1990 aa8.16□□□□□ -1.1
CLIP1-219ENST00000620786 NDUFC2O95298 119 aa8.16□□□□□ -1.1
CLIP1-219ENST00000620786 RNASE8Q8TDE3 154 aaKnown RBP8.16□□□□□ -1.1
CLIP1-219ENST00000620786 IGLV4-60A0A075B6I1 120 aa8.15□□□□□ -1.1
CLIP1-219ENST00000620786 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.15□□□□□ -1.1
CLIP1-219ENST00000620786 DSCAML1Q8TD84 2053 aa8.15□□□□□ -1.11
CLIP1-219ENST00000620786 J3KT08 172 aa8.14□□□□□ -1.11
CLIP1-219ENST00000620786 LINC00242Q5T6M2 205 aa8.14□□□□□ -1.11
CLIP1-219ENST00000620786 FHL3Q13643 280 aa8.14□□□□□ -1.11
CLIP1-219ENST00000620786 SPG11Q96JI7 2443 aa8.14□□□□□ -1.11
CLIP1-219ENST00000620786 K7ERS5 55 aa8.14□□□□□ -1.11
CLIP1-219ENST00000620786 LYPD5Q6UWN5 251 aa8.14□□□□□ -1.11
CLIP1-219ENST00000620786 POM121L12Q8N7R1 296 aa8.14□□□□□ -1.11
CLIP1-219ENST00000620786 CSPG4Q6UVK1 2322 aa8.14□□□□□ -1.11
CLIP1-219ENST00000620786 C20orf197Q8N268 126 aa8.14□□□□□ -1.11
CLIP1-219ENST00000620786 NDUFV3P56181 108 aaKnown RBP8.13□□□□□ -1.11
CLIP1-219ENST00000620786 COX6A2Q02221 97 aa8.13□□□□□ -1.11
CLIP1-219ENST00000620786 ATG2AQ2TAZ0 1938 aa8.13□□□□□ -1.11
CLIP1-219ENST00000620786 LINC00694P0DN24 101 aa8.13□□□□□ -1.11
CLIP1-219ENST00000620786 PRR14LQ5THK1 2151 aa8.12□□□□□ -1.11
CLIP1-219ENST00000620786 CNFNQ9BYD5 112 aa8.12□□□□□ -1.11
CLIP1-219ENST00000620786 TRBV10-3A0A0K0K1G6 114 aa8.12□□□□□ -1.11
CLIP1-219ENST00000620786 IGIPA6NJ69 53 aa8.11□□□□□ -1.11
CLIP1-219ENST00000620786 PRR15LQ9BU68 103 aa8.11□□□□□ -1.11
CLIP1-219ENST00000620786 CPAMD8Q8IZJ3 1885 aa8.11□□□□□ -1.11
CLIP1-219ENST00000620786 HIVEP3Q5T1R4 2406 aa8.1□□□□□ -1.11
CLIP1-219ENST00000620786 SMIM1B2RUZ4 78 aa8.1□□□□□ -1.11
CLIP1-219ENST00000620786 LST1O00453 97 aa8.1□□□□□ -1.11
CLIP1-219ENST00000620786 WNK1Q9H4A3 2382 aa8.09□□□□□ -1.11
CLIP1-219ENST00000620786 MDFIQ99750 246 aa8.09□□□□□ -1.11
CLIP1-219ENST00000620786 Q6ZSN1 163 aa8.09□□□□□ -1.11
CLIP1-219ENST00000620786 MPLKIPQ8TAP9 179 aa8.09□□□□□ -1.11
CLIP1-219ENST00000620786 F8WDY8 70 aa8.09□□□□□ -1.11
CLIP1-219ENST00000620786 ESRGQ1W209 222 aa8.08□□□□□ -1.12
CLIP1-219ENST00000620786 MRPL55Q7Z7F7 128 aaKnown RBP8.08□□□□□ -1.12
CLIP1-219ENST00000620786 MT-ATP8P03928 68 aa8.08□□□□□ -1.12
CLIP1-219ENST00000620786 Q6ZVQ6 151 aa8.08□□□□□ -1.12
CLIP1-219ENST00000620786 FAM30AQ9NZY2 134 aa8.08□□□□□ -1.12
CLIP1-219ENST00000620786 CELA1Q9UNI1 258 aa8.08□□□□□ -1.12
CLIP1-219ENST00000620786 NDUFC2-KCTD14E9PQ53 114 aa8.08□□□□□ -1.12
CLIP1-219ENST00000620786 BEAN1Q3B7T3 259 aa8.08□□□□□ -1.12
CLIP1-219ENST00000620786 ARHGAP32A7KAX9 2087 aa8.08□□□□□ -1.12
CLIP1-219ENST00000620786 PRR3P79522 188 aaKnown RBP8.08□□□□□ -1.12
CLIP1-219ENST00000620786 Q8N9L7 120 aa8.08□□□□□ -1.12
CLIP1-219ENST00000620786 SERP1Q9Y6X1 66 aa8.08□□□□□ -1.12
CLIP1-219ENST00000620786 SPTSSBQ8NFR3 76 aa8.08□□□□□ -1.12
CLIP1-219ENST00000620786 Q8N2B8 174 aa8.07□□□□□ -1.12
CLIP1-219ENST00000620786 SVIPQ8NHG7 77 aa8.07□□□□□ -1.12
CLIP1-219ENST00000620786 HCFC1P51610 2035 aa8.07□□□□□ -1.12
CLIP1-219ENST00000620786 FAM236DA0A1B0GTK5 79 aa8.07□□□□□ -1.12
CLIP1-219ENST00000620786 FAM236CP0DP71 79 aa8.07□□□□□ -1.12
CLIP1-219ENST00000620786 Q9BRP9 147 aa8.07□□□□□ -1.12
CLIP1-219ENST00000620786 RETNLBQ9BQ08 111 aa8.07□□□□□ -1.12
CLIP1-219ENST00000620786 IGHV6-1A0A0B4J1U7 121 aa8.07□□□□□ -1.12
CLIP1-219ENST00000620786 C2orf48Q96LS8 159 aa8.07□□□□□ -1.12
CLIP1-219ENST00000620786 YPEL4Q96NS1 127 aa8.06□□□□□ -1.12
CLIP1-219ENST00000620786 FAM19A3Q7Z5A8 133 aa8.06□□□□□ -1.12
CLIP1-219ENST00000620786 EXPH5Q8NEV8 1989 aa8.06□□□□□ -1.12
CLIP1-219ENST00000620786 BRK1Q8WUW1 75 aa8.05□□□□□ -1.12
CLIP1-219ENST00000620786 KRTAP24-1Q3LI83 254 aa8.05□□□□□ -1.12
CLIP1-219ENST00000620786 Q8N814 137 aa8.05□□□□□ -1.12
CLIP1-219ENST00000620786 A0A1B0GUV1 79 aa8.05□□□□□ -1.12
CLIP1-219ENST00000620786 PRYO14603 147 aa8.04□□□□□ -1.12
CLIP1-219ENST00000620786 CSDC2Q9Y534 153 aaKnown RBP8.04□□□□□ -1.12
CLIP1-219ENST00000620786 C2orf91Q6ZV80 131 aa8.04□□□□□ -1.12
CLIP1-219ENST00000620786 SNURFQ9Y675 71 aa8.04□□□□□ -1.12
CLIP1-219ENST00000620786 NAV2Q8IVL1 2488 aa8.04□□□□□ -1.12
CLIP1-219ENST00000620786 UQCRQO14949 82 aa8.04□□□□□ -1.12
CLIP1-219ENST00000620786 Q6JHZ5 121 aa8.03□□□□□ -1.12
CLIP1-219ENST00000620786 NTM-AS1Q6ZSK4 140 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms