RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 FAM19A3Q7Z5A8 133 aa5.41□□□□□ -1.54
CPNE3-209ENST00000620393 C10orf126Q8N4M7 172 aa5.41□□□□□ -1.54
CPNE3-209ENST00000620393 UBE2WQ96B02 151 aa5.41□□□□□ -1.54
CPNE3-209ENST00000620393 MRPL35Q9NZE8 188 aaKnown RBP5.41□□□□□ -1.54
CPNE3-209ENST00000620393 TRAV8-4A0A0B4J246 113 aa5.4□□□□□ -1.54
CPNE3-209ENST00000620393 IGKV3OR2-268A0A0C4DH90 116 aa5.4□□□□□ -1.54
CPNE3-209ENST00000620393 A0A0J9YXV3 536 aa5.4□□□□□ -1.54
CPNE3-209ENST00000620393 C20orf202A1L168 122 aa5.4□□□□□ -1.54
CPNE3-209ENST00000620393 F8VRH5 84 aa5.4□□□□□ -1.54
CPNE3-209ENST00000620393 IGLC3P0DOY3 106 aa5.4□□□□□ -1.54
CPNE3-209ENST00000620393 AKR1D1P51857 326 aa5.4□□□□□ -1.54
CPNE3-209ENST00000620393 SEC11AP67812 179 aa5.4□□□□□ -1.54
CPNE3-209ENST00000620393 JOSD1Q15040 202 aaPredicted RBP5.4□□□□□ -1.54
CPNE3-209ENST00000620393 SS18Q15532 418 aa5.4□□□□□ -1.54
CPNE3-209ENST00000620393 MIAQ16674 131 aa5.4□□□□□ -1.54
CPNE3-209ENST00000620393 LINC00242Q5T6M2 205 aa5.4□□□□□ -1.54
CPNE3-209ENST00000620393 NFE4Q86UQ8 179 aa5.4□□□□□ -1.54
CPNE3-209ENST00000620393 PMCHL2Q9BQD1 86 aa5.4□□□□□ -1.54
CPNE3-209ENST00000620393 VPS13DQ5THJ4 4388 aa5.39□□□□□ -1.55
CPNE3-209ENST00000620393 IGLV4-69A0A075B6H9 119 aa5.39□□□□□ -1.55
CPNE3-209ENST00000620393 TRAV8-3A0A0A6YYJ7 113 aa5.39□□□□□ -1.55
CPNE3-209ENST00000620393 NBDYA0A0U1RRE5 68 aa5.39□□□□□ -1.55
CPNE3-209ENST00000620393 TINCRA0A1B0GVN0 87 aa5.39□□□□□ -1.55
CPNE3-209ENST00000620393 LY6G6CO95867 125 aa5.39□□□□□ -1.55
CPNE3-209ENST00000620393 SCGB1D1O95968 90 aa5.39□□□□□ -1.55
CPNE3-209ENST00000620393 CRPP02741 224 aa5.39□□□□□ -1.55
CPNE3-209ENST00000620393 COX6A2Q02221 97 aa5.39□□□□□ -1.55
CPNE3-209ENST00000620393 CLPSL2Q6UWE3 100 aa5.39□□□□□ -1.55
CPNE3-209ENST00000620393 LINC00476Q8WZB0 136 aa5.39□□□□□ -1.55
CPNE3-209ENST00000620393 GEMIN7Q9H840 131 aaKnown RBP5.39□□□□□ -1.55
CPNE3-209ENST00000620393 C11orf86A6NJI1 115 aa5.38□□□□□ -1.55
CPNE3-209ENST00000620393 DPM2O94777 84 aa5.38□□□□□ -1.55
CPNE3-209ENST00000620393 IGKCP01834 107 aa5.38□□□□□ -1.55
CPNE3-209ENST00000620393 PLNP26678 52 aa5.38□□□□□ -1.55
CPNE3-209ENST00000620393 HERVK_113P63121 156 aa5.38□□□□□ -1.55
CPNE3-209ENST00000620393 TTC32Q5I0X7 151 aa5.38□□□□□ -1.55
CPNE3-209ENST00000620393 PYY3Q5JQD4 70 aa5.38□□□□□ -1.55
CPNE3-209ENST00000620393 CD164L2Q6UWJ8 174 aa5.38□□□□□ -1.55
CPNE3-209ENST00000620393 CHCHD10Q8WYQ3 142 aaPredicted RBP5.38□□□□□ -1.55
CPNE3-209ENST00000620393 KRTAP1-5Q9BYS1 174 aa5.38□□□□□ -1.55
CPNE3-209ENST00000620393 IGLV10-54A0A075B6I4 117 aa5.37□□□□□ -1.55
CPNE3-209ENST00000620393 IGLV5-45A0A087WSX0 123 aa5.37□□□□□ -1.55
CPNE3-209ENST00000620393 IGHV3OR16-9A0A0B4J2B5 98 aa5.37□□□□□ -1.55
CPNE3-209ENST00000620393 XCL1P47992 114 aa5.37□□□□□ -1.55
CPNE3-209ENST00000620393 KRTAP26-1Q6PEX3 210 aa5.37□□□□□ -1.55
CPNE3-209ENST00000620393 TENM2Q9NT68 2774 aa5.37□□□□□ -1.55
CPNE3-209ENST00000620393 IGKV2D-24A0A075B6R9 120 aa5.36□□□□□ -1.55
CPNE3-209ENST00000620393 GAGE12HA6NDE8 117 aa5.36□□□□□ -1.55
CPNE3-209ENST00000620393 M0R2N4 97 aa5.36□□□□□ -1.55
CPNE3-209ENST00000620393 ZNF22P17026 224 aaPredicted RBP5.36□□□□□ -1.55
CPNE3-209ENST00000620393 FOXI1Q12951 378 aa5.36□□□□□ -1.55
CPNE3-209ENST00000620393 TMEM170BQ5T4T1 132 aa5.36□□□□□ -1.55
CPNE3-209ENST00000620393 Q6ZR54 194 aa5.36□□□□□ -1.55
CPNE3-209ENST00000620393 LINC00469Q8N7U9 141 aa5.36□□□□□ -1.55
CPNE3-209ENST00000620393 RMI2Q96E14 147 aa5.36□□□□□ -1.55
CPNE3-209ENST00000620393 CHAC1Q9BUX1 264 aa5.36□□□□□ -1.55
CPNE3-209ENST00000620393 C1orf43Q9BWL3 253 aa5.36□□□□□ -1.55
CPNE3-209ENST00000620393 TM2D2Q9BX73 214 aa5.36□□□□□ -1.55
CPNE3-209ENST00000620393 Q9HAA7 133 aa5.36□□□□□ -1.55
CPNE3-209ENST00000620393 CDKN2A-AS1Q9UH64 79 aa5.36□□□□□ -1.55
CPNE3-209ENST00000620393 COX11Q9Y6N1 276 aa5.36□□□□□ -1.55
CPNE3-209ENST00000620393 DNAH1Q9P2D7 4330 aa5.35□□□□□ -1.55
CPNE3-209ENST00000620393 A0A087WZ39 114 aa5.35□□□□□ -1.55
CPNE3-209ENST00000620393 H3BRM9 83 aa5.35□□□□□ -1.55
CPNE3-209ENST00000620393 C5orf38Q86SI9 138 aa5.35□□□□□ -1.55
CPNE3-209ENST00000620393 ATOH7Q8N100 152 aa5.35□□□□□ -1.55
CPNE3-209ENST00000620393 LINC01561Q8N1V8 128 aa5.35□□□□□ -1.55
CPNE3-209ENST00000620393 TMEM223A0PJW6 202 aa5.34□□□□□ -1.55
CPNE3-209ENST00000620393 H3BS24 57 aa5.34□□□□□ -1.55
CPNE3-209ENST00000620393 COX7A2LO14548 114 aa5.34□□□□□ -1.55
CPNE3-209ENST00000620393 STPG4Q8N801 248 aa5.34□□□□□ -1.55
CPNE3-209ENST00000620393 LYSTQ99698 3801 aa5.34□□□□□ -1.55
CPNE3-209ENST00000620393 LCE6AA0A183 80 aa5.33□□□□□ -1.56
CPNE3-209ENST00000620393 hDV102S1A0JD36 115 aa5.33□□□□□ -1.56
CPNE3-209ENST00000620393 HSBP1L1C9JCN9 74 aa5.33□□□□□ -1.56
CPNE3-209ENST00000620393 MALP21145 153 aa5.33□□□□□ -1.56
CPNE3-209ENST00000620393 ALMS1Q8TCU4 4167 aa5.32□□□□□ -1.56
CPNE3-209ENST00000620393 IGHV3-64A0A075B6Q5 118 aa5.32□□□□□ -1.56
CPNE3-209ENST00000620393 IGHV1-58A0A0C4DH39 117 aa5.32□□□□□ -1.56
CPNE3-209ENST00000620393 IGLV5-39A0A0G2JS06 123 aa5.32□□□□□ -1.56
CPNE3-209ENST00000620393 SMIM1B2RUZ4 78 aa5.32□□□□□ -1.56
CPNE3-209ENST00000620393 E9PLD3 99 aa5.32□□□□□ -1.56
CPNE3-209ENST00000620393 APOMO95445 188 aa5.32□□□□□ -1.56
CPNE3-209ENST00000620393 SPINK8P0C7L1 97 aa5.32□□□□□ -1.56
CPNE3-209ENST00000620393 SMIM6P0DI80 62 aa5.32□□□□□ -1.56
CPNE3-209ENST00000620393 HERVK_113P61574 105 aa5.32□□□□□ -1.56
CPNE3-209ENST00000620393 MAJINQ3KP22 176 aa5.32□□□□□ -1.56
CPNE3-209ENST00000620393 CFAP161Q6P656 301 aa5.32□□□□□ -1.56
CPNE3-209ENST00000620393 Q6ZRN7 208 aaPredicted RBP5.32□□□□□ -1.56
CPNE3-209ENST00000620393 C6orf223Q8N319 242 aa5.32□□□□□ -1.56
CPNE3-209ENST00000620393 MAPKAPK5-AS1Q8N8E1 139 aa5.32□□□□□ -1.56
CPNE3-209ENST00000620393 KMT2AQ03164 3969 aa5.31□□□□□ -1.56
CPNE3-209ENST00000620393 LEPROTO15243 131 aa5.31□□□□□ -1.56
CPNE3-209ENST00000620393 ANKRD39Q53RE8 183 aa5.31□□□□□ -1.56
CPNE3-209ENST00000620393 C1orf134Q5TEV5 83 aa5.31□□□□□ -1.56
CPNE3-209ENST00000620393 VAMP8Q9BV40 100 aa5.31□□□□□ -1.56
CPNE3-209ENST00000620393 DNAH6Q9C0G6 4158 aa5.3□□□□□ -1.56
CPNE3-209ENST00000620393 PSCAO43653 123 aa5.3□□□□□ -1.56
CPNE3-209ENST00000620393 S100A12P80511 92 aa5.3□□□□□ -1.56
CPNE3-209ENST00000620393 KIAA0087Q14695 138 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms