RNA–Protein interactions for RNA: ENST00000620103.4

MUC1-228, Transcript of mucin 1, cell surface associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 1,811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-228ENST00000620103 RHODO00212 210 aa10.54□□□□□ -0.72
MUC1-228ENST00000620103 TOMM6Q96B49 74 aa10.54□□□□□ -0.72
MUC1-228ENST00000620103 LINC01600Q96MT4 127 aa10.54□□□□□ -0.72
MUC1-228ENST00000620103 SS18L2Q9UHA2 77 aa10.54□□□□□ -0.72
MUC1-228ENST00000620103 Q8TAT8 98 aa10.53□□□□□ -0.72
MUC1-228ENST00000620103 SMIM2Q9BVW6 85 aa10.53□□□□□ -0.72
MUC1-228ENST00000620103 PRADC1Q9BSG0 188 aa10.52□□□□□ -0.73
MUC1-228ENST00000620103 LENEPQ9Y5L5 61 aa10.52□□□□□ -0.73
MUC1-228ENST00000620103 LOC107984156A0A0G2JMH3 177 aa10.51□□□□□ -0.73
MUC1-228ENST00000620103 ARL17AQ8IVW1 177 aa10.51□□□□□ -0.73
MUC1-228ENST00000620103 ZNF815PA8K554 130 aa10.51□□□□□ -0.73
MUC1-228ENST00000620103 TCL1BO95988 128 aa10.51□□□□□ -0.73
MUC1-228ENST00000620103 ABCA13Q86UQ4 5058 aa10.5□□□□□ -0.73
MUC1-228ENST00000620103 ZFP2Q6ZN57 461 aa10.5□□□□□ -0.73
MUC1-228ENST00000620103 ANKRD29Q8N6D5 301 aa10.5□□□□□ -0.73
MUC1-228ENST00000620103 SCGB3A1Q96QR1 104 aa10.5□□□□□ -0.73
MUC1-228ENST00000620103 C16orf90A8MZG2 172 aa10.49□□□□□ -0.73
MUC1-228ENST00000620103 ZNF415Q09FC8 603 aa10.49□□□□□ -0.73
MUC1-228ENST00000620103 PAPPA-AS1Q5QFB9 102 aa10.49□□□□□ -0.73
MUC1-228ENST00000620103 PTH2Q96A98 100 aa10.49□□□□□ -0.73
MUC1-228ENST00000620103 PRO0255Q9UI72 69 aa10.49□□□□□ -0.73
MUC1-228ENST00000620103 IGKV3D-20A0A0C4DH25 116 aa10.49□□□□□ -0.73
MUC1-228ENST00000620103 PAX4O43316 350 aa10.49□□□□□ -0.73
MUC1-228ENST00000620103 FHL2Q14192 279 aa10.49□□□□□ -0.73
MUC1-228ENST00000620103 GAGE12JA6NER3 117 aa10.48□□□□□ -0.73
MUC1-228ENST00000620103 CDK2AP2O75956 126 aa10.48□□□□□ -0.73
MUC1-228ENST00000620103 NDUFV3P56181 108 aaKnown RBP10.48□□□□□ -0.73
MUC1-228ENST00000620103 GAGE4Q13068 117 aa10.48□□□□□ -0.73
MUC1-228ENST00000620103 SRSF9Q13242 221 aaKnown RBP eCLIP10.48□□□□□ -0.73
MUC1-228ENST00000620103 C10orf126Q8N4M7 172 aa10.48□□□□□ -0.73
MUC1-228ENST00000620103 MDFICQ9P1T7 246 aa10.48□□□□□ -0.73
MUC1-228ENST00000620103 ICOSQ9Y6W8 199 aa10.48□□□□□ -0.73
MUC1-228ENST00000620103 B5MCH6 92 aa10.47□□□□□ -0.73
MUC1-228ENST00000620103 M0R381 172 aa10.47□□□□□ -0.73
MUC1-228ENST00000620103 IGHV3-53P01767 116 aa10.47□□□□□ -0.73
MUC1-228ENST00000620103 HERVK_113P61574 105 aa10.47□□□□□ -0.73
MUC1-228ENST00000620103 GAGE2BQ13066 116 aa10.47□□□□□ -0.73
MUC1-228ENST00000620103 GAGE2EQ4V326 116 aa10.47□□□□□ -0.73
MUC1-228ENST00000620103 SCGB1D4Q6XE38 83 aa10.47□□□□□ -0.73
MUC1-228ENST00000620103 BAALCQ8WXS3 180 aa10.47□□□□□ -0.73
MUC1-228ENST00000620103 PLEKHB2Q96CS7 222 aa10.47□□□□□ -0.73
MUC1-228ENST00000620103 GAGE2DQ9UEU5 116 aa10.47□□□□□ -0.73
MUC1-228ENST00000620103 SCGB1C2P0DMR2 95 aa10.47□□□□□ -0.73
MUC1-228ENST00000620103 RASL10AQ92737 203 aa10.47□□□□□ -0.73
MUC1-228ENST00000620103 SPXQ9BT56 116 aa10.47□□□□□ -0.73
MUC1-228ENST00000620103 SNCGO76070 127 aa10.46□□□□□ -0.74
MUC1-228ENST00000620103 DNAH5Q8TE73 4624 aa10.46□□□□□ -0.74
MUC1-228ENST00000620103 APOBP04114 4563 aaKnown RBP10.46□□□□□ -0.74
MUC1-228ENST00000620103 SLC25A20O43772 301 aa10.45□□□□□ -0.74
MUC1-228ENST00000620103 MRPL23Q16540 153 aaKnown RBP10.45□□□□□ -0.74
MUC1-228ENST00000620103 FAM159AQ6UWV7 190 aa10.45□□□□□ -0.74
MUC1-228ENST00000620103 Q6ZRN7 208 aaPredicted RBP10.45□□□□□ -0.74
MUC1-228ENST00000620103 KRTAP4-5Q9BYR2 181 aa10.45□□□□□ -0.74
MUC1-228ENST00000620103 TRGV11A0A075B6L2 103 aa10.44□□□□□ -0.74
MUC1-228ENST00000620103 IGHV3-30P01768 117 aa10.44□□□□□ -0.74
MUC1-228ENST00000620103 IGHV3-30-5P0DP03 117 aa10.44□□□□□ -0.74
MUC1-228ENST00000620103 SUMO2P61956 95 aaKnown RBP10.44□□□□□ -0.74
MUC1-228ENST00000620103 C11orf21Q9P2W6 132 aa10.44□□□□□ -0.74
MUC1-228ENST00000620103 PRO1854Q9UHT4 67 aa10.44□□□□□ -0.74
MUC1-228ENST00000620103 NXPH4O95158 308 aa10.44□□□□□ -0.74
MUC1-228ENST00000620103 PPP1R17O96001 155 aa10.44□□□□□ -0.74
MUC1-228ENST00000620103 CFC1BP0CG36 223 aa10.44□□□□□ -0.74
MUC1-228ENST00000620103 CFC1P0CG37 223 aa10.44□□□□□ -0.74
MUC1-228ENST00000620103 IFITM1P13164 125 aa10.44□□□□□ -0.74
MUC1-228ENST00000620103 RPL13AP40429 203 aaKnown RBP10.44□□□□□ -0.74
MUC1-228ENST00000620103 LINC00315P59091 139 aa10.44□□□□□ -0.74
MUC1-228ENST00000620103 LYPD5Q6UWN5 251 aa10.44□□□□□ -0.74
MUC1-228ENST00000620103 SLC25A29Q8N8R3 303 aa10.44□□□□□ -0.74
MUC1-228ENST00000620103 TRAV26-2A0A0B4J265 109 aa10.43□□□□□ -0.74
MUC1-228ENST00000620103 RPL32P62910 135 aaKnown RBP10.43□□□□□ -0.74
MUC1-228ENST00000620103 C2orf66Q6UXQ4 117 aa10.43□□□□□ -0.74
MUC1-228ENST00000620103 KIR2DL4Q99706 377 aa10.43□□□□□ -0.74
MUC1-228ENST00000620103 KRTAP10-2P60368 255 aa10.42□□□□□ -0.74
MUC1-228ENST00000620103 SPANXN1Q5VSR9 72 aa10.42□□□□□ -0.74
MUC1-228ENST00000620103 TRAV21A0A0B4J279 112 aa10.42□□□□□ -0.74
MUC1-228ENST00000620103 TRGV4A0A0C4DH28 118 aa10.42□□□□□ -0.74
MUC1-228ENST00000620103 IGHV3-16A0A0C4DH30 117 aa10.42□□□□□ -0.74
MUC1-228ENST00000620103 A0A0B4J2C4 111 aa10.41□□□□□ -0.74
MUC1-228ENST00000620103 H3BVH4 76 aa10.41□□□□□ -0.74
MUC1-228ENST00000620103 K7EQD1 137 aa10.41□□□□□ -0.74
MUC1-228ENST00000620103 GNRH2O43555 120 aa10.41□□□□□ -0.74
MUC1-228ENST00000620103 IGLV4-69A0A075B6H9 119 aa10.4□□□□□ -0.74
MUC1-228ENST00000620103 TRAV4A0A0B4J268 109 aa10.4□□□□□ -0.74
MUC1-228ENST00000620103 C11orf86A6NJI1 115 aa10.4□□□□□ -0.74
MUC1-228ENST00000620103 M0R2P5 195 aa10.4□□□□□ -0.74
MUC1-228ENST00000620103 DPH3P1Q9H4G8 78 aa10.4□□□□□ -0.74
MUC1-228ENST00000620103 C9JAW5 83 aa10.39□□□□□ -0.75
MUC1-228ENST00000620103 CCDC179H3BU77 68 aa10.39□□□□□ -0.75
MUC1-228ENST00000620103 IGHV3-33P01772 117 aa10.39□□□□□ -0.75
MUC1-228ENST00000620103 CRYGDP07320 174 aa10.39□□□□□ -0.75
MUC1-228ENST00000620103 SFTA2Q6UW10 78 aa10.39□□□□□ -0.75
MUC1-228ENST00000620103 TMEM141Q96I45 108 aa10.39□□□□□ -0.75
MUC1-228ENST00000620103 GYPEP15421 78 aa10.38□□□□□ -0.75
MUC1-228ENST00000620103 HERV-K104P63124 156 aa10.38□□□□□ -0.75
MUC1-228ENST00000620103 ATXN8Q156A1 80 aa10.38□□□□□ -0.75
MUC1-228ENST00000620103 PMVKQ15126 192 aa10.37□□□□□ -0.75
MUC1-228ENST00000620103 AMELXQ99217 191 aa10.37□□□□□ -0.75
MUC1-228ENST00000620103 TRAV8-4A0A0B4J246 113 aa10.37□□□□□ -0.75
MUC1-228ENST00000620103 TIMM17AQ99595 171 aa10.37□□□□□ -0.75
MUC1-228ENST00000620103 TNFRSF18Q9Y5U5 241 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms