RNA–Protein interactions for RNA: ENST00000619785.1

SENP3-210, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 634 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-210ENST00000619785 CTRLP40313 264 aa4.24□□□□□ -1.73
SENP3-210ENST00000619785 VAMP3Q15836 100 aa4.24□□□□□ -1.73
SENP3-210ENST00000619785 TPRXLQ17RH7 258 aa4.24□□□□□ -1.73
SENP3-210ENST00000619785 RPP21Q9H633 154 aaKnown RBP4.24□□□□□ -1.73
SENP3-210ENST00000619785 TNFSF18Q9UNG2 199 aa4.24□□□□□ -1.73
SENP3-210ENST00000619785 LOC107984640A0A0U1RRK4 108 aa4.23□□□□□ -1.73
SENP3-210ENST00000619785 CCDC160A6NGH7 325 aa4.23□□□□□ -1.73
SENP3-210ENST00000619785 HSBP1L1C9JCN9 74 aa4.23□□□□□ -1.73
SENP3-210ENST00000619785 SIX6O95475 246 aa4.23□□□□□ -1.73
SENP3-210ENST00000619785 MT-ND6P03923 174 aa4.23□□□□□ -1.73
SENP3-210ENST00000619785 PET100P0DJ07 73 aa4.23□□□□□ -1.73
SENP3-210ENST00000619785 ATP6V0CP27449 155 aa4.23□□□□□ -1.73
SENP3-210ENST00000619785 NMUP48645 174 aa4.23□□□□□ -1.73
SENP3-210ENST00000619785 RAB5CP51148 216 aa4.23□□□□□ -1.73
SENP3-210ENST00000619785 HERVK_113P61574 105 aa4.23□□□□□ -1.73
SENP3-210ENST00000619785 CTAG1AP78358 180 aa4.23□□□□□ -1.73
SENP3-210ENST00000619785 SYCNQ0VAF6 134 aa4.23□□□□□ -1.73
SENP3-210ENST00000619785 C1orf137Q5JT78 98 aa4.23□□□□□ -1.73
SENP3-210ENST00000619785 KRTAP11-1Q8IUC1 163 aa4.23□□□□□ -1.73
SENP3-210ENST00000619785 AP1S3Q96PC3 154 aa4.23□□□□□ -1.73
SENP3-210ENST00000619785 TRAV1-1A0A0B4J248 108 aa4.22□□□□□ -1.73
SENP3-210ENST00000619785 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.22□□□□□ -1.73
SENP3-210ENST00000619785 IGLC6P0CF74 106 aa4.22□□□□□ -1.73
SENP3-210ENST00000619785 FGF6P10767 208 aa4.22□□□□□ -1.73
SENP3-210ENST00000619785 SULT1A2P50226 295 aa4.22□□□□□ -1.73
SENP3-210ENST00000619785 MEF2BQ02080 365 aaPredicted RBP4.22□□□□□ -1.73
SENP3-210ENST00000619785 C9orf116Q5BN46 136 aaPredicted RBP4.22□□□□□ -1.73
SENP3-210ENST00000619785 NUP35Q8NFH5 326 aa4.22□□□□□ -1.73
SENP3-210ENST00000619785 OR5A1Q8NGJ0 315 aa4.22□□□□□ -1.73
SENP3-210ENST00000619785 NIT2Q9NQR4 276 aa4.22□□□□□ -1.73
SENP3-210ENST00000619785 TMSB15BA0A087X1C1 80 aa4.21□□□□□ -1.74
SENP3-210ENST00000619785 NCR2O95944 276 aa4.21□□□□□ -1.74
SENP3-210ENST00000619785 ZNF25P17030 456 aaPredicted RBP4.21□□□□□ -1.74
SENP3-210ENST00000619785 RASL11AQ6T310 242 aa4.21□□□□□ -1.74
SENP3-210ENST00000619785 PHF5AQ7RTV0 110 aaKnown RBP4.21□□□□□ -1.74
SENP3-210ENST00000619785 TSKUQ8WUA8 353 aa4.21□□□□□ -1.74
SENP3-210ENST00000619785 MAP1LC3CQ9BXW4 147 aa4.21□□□□□ -1.74
SENP3-210ENST00000619785 SMIM3Q9BZL3 60 aa4.21□□□□□ -1.74
SENP3-210ENST00000619785 V9GYY9 64 aa4.21□□□□□ -1.74
SENP3-210ENST00000619785 IGLV4-69A0A075B6H9 119 aa4.2□□□□□ -1.74
SENP3-210ENST00000619785 CTXND1A0A1B0GTU2 59 aa4.2□□□□□ -1.74
SENP3-210ENST00000619785 APOMO95445 188 aa4.2□□□□□ -1.74
SENP3-210ENST00000619785 NTF3P20783 257 aa4.2□□□□□ -1.74
SENP3-210ENST00000619785 CXCL5P42830 114 aa4.2□□□□□ -1.74
SENP3-210ENST00000619785 SPANXN1Q5VSR9 72 aa4.2□□□□□ -1.74
SENP3-210ENST00000619785 FAM210AQ96ND0 272 aa4.2□□□□□ -1.74
SENP3-210ENST00000619785 CCDC32Q9BV29 185 aa4.2□□□□□ -1.74
SENP3-210ENST00000619785 LINC00959A0A1B0GUT2 108 aa4.19□□□□□ -1.74
SENP3-210ENST00000619785 UBE2L6O14933 153 aa4.19□□□□□ -1.74
SENP3-210ENST00000619785 TLX1NBP0CAT3 122 aa4.19□□□□□ -1.74
SENP3-210ENST00000619785 SMIM17P0DL12 118 aa4.19□□□□□ -1.74
SENP3-210ENST00000619785 ESDP10768 282 aa4.19□□□□□ -1.74
SENP3-210ENST00000619785 PFN2P35080 140 aa4.19□□□□□ -1.74
SENP3-210ENST00000619785 UBE2AP49459 152 aa4.19□□□□□ -1.74
SENP3-210ENST00000619785 NKX2-5P52952 324 aaPredicted RBP4.19□□□□□ -1.74
SENP3-210ENST00000619785 UBE2G1P62253 170 aa4.19□□□□□ -1.74
SENP3-210ENST00000619785 COTL1Q14019 142 aa4.19□□□□□ -1.74
SENP3-210ENST00000619785 LINC00526Q96FQ7 95 aa4.19□□□□□ -1.74
SENP3-210ENST00000619785 CNFNQ9BYD5 112 aa4.19□□□□□ -1.74
SENP3-210ENST00000619785 BCL2P10415 239 aa4.18□□□□□ -1.74
SENP3-210ENST00000619785 UBE2D1P51668 147 aa4.18□□□□□ -1.74
SENP3-210ENST00000619785 LINC00299Q6ZSB3 139 aa4.18□□□□□ -1.74
SENP3-210ENST00000619785 MRPL52Q86TS9 123 aaKnown RBP4.18□□□□□ -1.74
SENP3-210ENST00000619785 LINC00469Q8N7U9 141 aa4.18□□□□□ -1.74
SENP3-210ENST00000619785 MARVELD1Q9BSK0 173 aa4.18□□□□□ -1.74
SENP3-210ENST00000619785 KRTAP2-2Q9BYT5 123 aa4.18□□□□□ -1.74
SENP3-210ENST00000619785 G3V3Q6 166 aa4.17□□□□□ -1.74
SENP3-210ENST00000619785 CCL25O15444 150 aa4.17□□□□□ -1.74
SENP3-210ENST00000619785 MRPL35Q9NZE8 188 aaKnown RBP4.17□□□□□ -1.74
SENP3-210ENST00000619785 MUC21A0A140T8X8 626 aa4.16□□□□□ -1.74
SENP3-210ENST00000619785 C19orf71A6NCJ1 209 aa4.16□□□□□ -1.74
SENP3-210ENST00000619785 XCL1P47992 114 aa4.16□□□□□ -1.74
SENP3-210ENST00000619785 UBE2G2P60604 165 aa4.16□□□□□ -1.74
SENP3-210ENST00000619785 ASB16-AS1Q495Z4 193 aa4.16□□□□□ -1.74
SENP3-210ENST00000619785 CDC42SE2Q9NRR3 84 aa4.16□□□□□ -1.74
SENP3-210ENST00000619785 TRBV6-5A0A0K0K1A5 114 aa4.15□□□□□ -1.75
SENP3-210ENST00000619785 F2Z2F3 143 aa4.15□□□□□ -1.75
SENP3-210ENST00000619785 ZNF861PO60384 105 aa4.15□□□□□ -1.75
SENP3-210ENST00000619785 TRGC1P0CF51 173 aa4.15□□□□□ -1.75
SENP3-210ENST00000619785 AKR1C3P42330 323 aa4.15□□□□□ -1.75
SENP3-210ENST00000619785 ORMDL2Q53FV1 153 aa4.15□□□□□ -1.75
SENP3-210ENST00000619785 GATD1Q8NB37 220 aa4.15□□□□□ -1.75
SENP3-210ENST00000619785 STOML3Q8TAV4 291 aa4.15□□□□□ -1.75
SENP3-210ENST00000619785 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.14□□□□□ -1.75
SENP3-210ENST00000619785 IGHV3OR16-9A0A0B4J2B5 98 aa4.14□□□□□ -1.75
SENP3-210ENST00000619785 IGKV3OR2-268A0A0C4DH90 116 aa4.14□□□□□ -1.75
SENP3-210ENST00000619785 IGKV2-29A2NJV5 120 aaPredicted RBP4.14□□□□□ -1.75
SENP3-210ENST00000619785 MGPP08493 103 aa4.14□□□□□ -1.75
SENP3-210ENST00000619785 RPS20P60866 119 aaKnown RBP4.14□□□□□ -1.75
SENP3-210ENST00000619785 EIF5AP63241 154 aaKnown RBP4.14□□□□□ -1.75
SENP3-210ENST00000619785 KRTAP19-2Q3LHN2 52 aa4.14□□□□□ -1.75
SENP3-210ENST00000619785 AMMECR1LQ6DCA0 310 aa4.14□□□□□ -1.75
SENP3-210ENST00000619785 EIF5AL1Q6IS14 154 aaKnown RBP4.14□□□□□ -1.75
SENP3-210ENST00000619785 C9orf62Q8N4C0 152 aa4.14□□□□□ -1.75
SENP3-210ENST00000619785 SMIM12Q96EX1 92 aa4.14□□□□□ -1.75
SENP3-210ENST00000619785 CAMK2N2Q96S95 79 aa4.14□□□□□ -1.75
SENP3-210ENST00000619785 KRTAP4-1Q9BYQ7 146 aa4.14□□□□□ -1.75
SENP3-210ENST00000619785 A0A1B0GW15 77 aa4.13□□□□□ -1.75
SENP3-210ENST00000619785 MAP1LC3B2A6NCE7 125 aa4.13□□□□□ -1.75
SENP3-210ENST00000619785 INMT-MINDY4F8WBC2 141 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms