RNA–Protein interactions for RNA: ENST00000619193.4

RDM1-223, Transcript of RAD52 motif containing 1, human

TSL 1 (best)

Gene RDM1, Length 686 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDM1-223	ENST00000619193		H7C423	109 aa		4.23	□□□□□ -1.73
RDM1-223	ENST00000619193	LST1	O00453	97 aa		4.23	□□□□□ -1.73
RDM1-223	ENST00000619193	GIG44	P09565	113 aa	Predicted RBP	4.23	□□□□□ -1.73
RDM1-223	ENST00000619193	ZNF625	Q96I27	306 aa	Predicted RBP	4.23	□□□□□ -1.73
RDM1-223	ENST00000619193	TMEM101	Q96IK0	257 aa		4.23	□□□□□ -1.73
RDM1-223	ENST00000619193	PPDPF	Q9H3Y8	114 aa		4.23	□□□□□ -1.73
RDM1-223	ENST00000619193	CDKN2A-AS1	Q9UH64	79 aa		4.23	□□□□□ -1.73
RDM1-223	ENST00000619193	TRAV26-1	A0A087WT03	109 aa		4.22	□□□□□ -1.73
RDM1-223	ENST00000619193	PLAC8L1	A1L4L8	177 aa		4.22	□□□□□ -1.73
RDM1-223	ENST00000619193		H3BT86	120 aa		4.22	□□□□□ -1.73
RDM1-223	ENST00000619193	LINC00694	P0DN24	101 aa		4.22	□□□□□ -1.73
RDM1-223	ENST00000619193	IFITM1	P13164	125 aa		4.22	□□□□□ -1.73
RDM1-223	ENST00000619193	ATXN8	Q156A1	80 aa		4.22	□□□□□ -1.73
RDM1-223	ENST00000619193	LINC00242	Q5T6M2	205 aa		4.22	□□□□□ -1.73
RDM1-223	ENST00000619193		Q6Q795	121 aa		4.22	□□□□□ -1.73
RDM1-223	ENST00000619193	C4orf3	Q8WVX3	66 aa		4.22	□□□□□ -1.73
RDM1-223	ENST00000619193	DUX3	Q96PT4	197 aa		4.22	□□□□□ -1.73
RDM1-223	ENST00000619193	GEMIN7	Q9H840	131 aa	Known RBP	4.22	□□□□□ -1.73
RDM1-223	ENST00000619193	TRRAP	Q9Y4A5	3859 aa		4.21	□□□□□ -1.74
RDM1-223	ENST00000619193	IGHV3-38	A0A0C4DH36	116 aa		4.21	□□□□□ -1.74
RDM1-223	ENST00000619193		A0A1B0GV72	72 aa		4.21	□□□□□ -1.74
RDM1-223	ENST00000619193	SMIM1	B2RUZ4	78 aa		4.21	□□□□□ -1.74
RDM1-223	ENST00000619193	CLEC2B	Q92478	149 aa		4.21	□□□□□ -1.74
RDM1-223	ENST00000619193	CSDC2	Q9Y534	153 aa	Known RBP	4.21	□□□□□ -1.74
RDM1-223	ENST00000619193	TNFRSF18	Q9Y5U5	241 aa		4.21	□□□□□ -1.74
RDM1-223	ENST00000619193	TRAV4	A0A0B4J268	109 aa		4.2	□□□□□ -1.74
RDM1-223	ENST00000619193	TEX49	A0A1B0GTD5	131 aa		4.2	□□□□□ -1.74
RDM1-223	ENST00000619193	TMEM262	E9PQX1	116 aa		4.2	□□□□□ -1.74
RDM1-223	ENST00000619193		H7C2G1	150 aa		4.2	□□□□□ -1.74
RDM1-223	ENST00000619193	NDUFA7	O95182	113 aa		4.2	□□□□□ -1.74
RDM1-223	ENST00000619193	INS	P01308	110 aa		4.2	□□□□□ -1.74
RDM1-223	ENST00000619193	SCGB1C2	P0DMR2	95 aa		4.2	□□□□□ -1.74
RDM1-223	ENST00000619193	SDIM1	Q6ZPB5	146 aa		4.2	□□□□□ -1.74
RDM1-223	ENST00000619193	LRRC75A-AS1	Q8N1F1	130 aa		4.2	□□□□□ -1.74
RDM1-223	ENST00000619193	LINC00308	Q8TCZ7	52 aa		4.2	□□□□□ -1.74
RDM1-223	ENST00000619193	C19orf73	Q9NVV2	129 aa		4.2	□□□□□ -1.74
RDM1-223	ENST00000619193	TRAV25	A0A0B4J276	109 aa		4.19	□□□□□ -1.74
RDM1-223	ENST00000619193	FAM240A	A0A1B0GVK7	77 aa		4.19	□□□□□ -1.74
RDM1-223	ENST00000619193	MRPL23	Q16540	153 aa	Known RBP	4.19	□□□□□ -1.74
RDM1-223	ENST00000619193	DAND5	Q8N907	189 aa		4.19	□□□□□ -1.74
RDM1-223	ENST00000619193	UBE2W	Q96B02	151 aa		4.19	□□□□□ -1.74
RDM1-223	ENST00000619193	TRBV10-1	A0A0K0K1A3	114 aa		4.18	□□□□□ -1.74
RDM1-223	ENST00000619193		K7EQD1	137 aa		4.18	□□□□□ -1.74
RDM1-223	ENST00000619193	NPC2	P61916	151 aa		4.18	□□□□□ -1.74
RDM1-223	ENST00000619193	C2orf82	Q6UX34	121 aa		4.18	□□□□□ -1.74
RDM1-223	ENST00000619193		Q6ZTI0	123 aa		4.18	□□□□□ -1.74
RDM1-223	ENST00000619193	TMEM86B	Q8N661	226 aa		4.18	□□□□□ -1.74
RDM1-223	ENST00000619193	C15orf53	Q8NAA6	179 aa		4.18	□□□□□ -1.74
RDM1-223	ENST00000619193	FAM218A	Q96MZ4	157 aa		4.18	□□□□□ -1.74
RDM1-223	ENST00000619193	LINC01587	Q99440	93 aa		4.18	□□□□□ -1.74
RDM1-223	ENST00000619193		Q9H8V8	135 aa		4.18	□□□□□ -1.74
RDM1-223	ENST00000619193	CDC42SE2	Q9NRR3	84 aa		4.18	□□□□□ -1.74
RDM1-223	ENST00000619193	SORL1	Q92673	2214 aa		4.18	□□□□□ -1.74
RDM1-223	ENST00000619193	IGKV2-28	A0A075B6P5	120 aa		4.17	□□□□□ -1.74
RDM1-223	ENST00000619193	TRAV8-4	A0A0B4J246	113 aa		4.17	□□□□□ -1.74
RDM1-223	ENST00000619193	TRBV7-7	A0A0K0K1E9	115 aa		4.17	□□□□□ -1.74
RDM1-223	ENST00000619193	COX7A2L	O14548	114 aa		4.17	□□□□□ -1.74
RDM1-223	ENST00000619193	IGKV2D-28	P01615	120 aa		4.17	□□□□□ -1.74
RDM1-223	ENST00000619193	HERVK_113	P63121	156 aa		4.17	□□□□□ -1.74
RDM1-223	ENST00000619193	CSNK1G2-AS1	Q8NCQ2	148 aa		4.17	□□□□□ -1.74
RDM1-223	ENST00000619193	SMCR5	Q8TEV8	140 aa		4.17	□□□□□ -1.74
RDM1-223	ENST00000619193	ESM1	Q9NQ30	184 aa		4.17	□□□□□ -1.74
RDM1-223	ENST00000619193	PEMT	Q9UBM1	199 aa		4.17	□□□□□ -1.74
RDM1-223	ENST00000619193	LOC100131303	A0A0U1RQF7	123 aa		4.16	□□□□□ -1.74
RDM1-223	ENST00000619193	TRAC	P01848	142 aa		4.16	□□□□□ -1.74
RDM1-223	ENST00000619193	PRSS2	P07478	247 aa		4.16	□□□□□ -1.74
RDM1-223	ENST00000619193	HTN1	P15515	57 aa		4.16	□□□□□ -1.74
RDM1-223	ENST00000619193	NDUFV3	P56181	108 aa	Known RBP	4.16	□□□□□ -1.74
RDM1-223	ENST00000619193	DAZ2	Q13117	558 aa	Known RBP	4.16	□□□□□ -1.74
RDM1-223	ENST00000619193		Q1RN00	199 aa		4.16	□□□□□ -1.74
RDM1-223	ENST00000619193	LINC00612	Q8N6U2	182 aa		4.16	□□□□□ -1.74
RDM1-223	ENST00000619193	C3orf56	Q8N813	242 aa		4.16	□□□□□ -1.74
RDM1-223	ENST00000619193	OVOL2	Q9BRP0	275 aa		4.16	□□□□□ -1.74
RDM1-223	ENST00000619193	XCL2	Q9UBD3	114 aa		4.16	□□□□□ -1.74
RDM1-223	ENST00000619193	TENM1	Q9UKZ4	2725 aa		4.15	□□□□□ -1.75
RDM1-223	ENST00000619193	TRGV1	A0A0A0MS02	117 aa		4.15	□□□□□ -1.75
RDM1-223	ENST00000619193	GAGE12J	A6NER3	117 aa		4.15	□□□□□ -1.75
RDM1-223	ENST00000619193	DNAJC9-AS1	A6NH13	148 aa		4.15	□□□□□ -1.75
RDM1-223	ENST00000619193	CCDC179	H3BU77	68 aa		4.15	□□□□□ -1.75
RDM1-223	ENST00000619193	GAGE4	Q13068	117 aa		4.15	□□□□□ -1.75
RDM1-223	ENST00000619193	GAGE5	Q13069	117 aa		4.15	□□□□□ -1.75
RDM1-223	ENST00000619193	TTC32	Q5I0X7	151 aa		4.15	□□□□□ -1.75
RDM1-223	ENST00000619193	FAM222A	Q5U5X8	452 aa		4.15	□□□□□ -1.75
RDM1-223	ENST00000619193	DAZ4	Q86SG3	579 aa	Known RBP	4.15	□□□□□ -1.75
RDM1-223	ENST00000619193	DYNLRB2	Q8TF09	96 aa		4.15	□□□□□ -1.75
RDM1-223	ENST00000619193	DAZ3	Q9NR90	486 aa	Known RBP	4.15	□□□□□ -1.75
RDM1-223	ENST00000619193	IGHV3OR16-9	A0A0B4J2B5	98 aa		4.14	□□□□□ -1.75
RDM1-223	ENST00000619193	PF4	P02776	101 aa		4.14	□□□□□ -1.75
RDM1-223	ENST00000619193	RPL28	P46779	137 aa	Known RBP	4.14	□□□□□ -1.75
RDM1-223	ENST00000619193	RPL36A	P83881	106 aa	Known RBP	4.14	□□□□□ -1.75
RDM1-223	ENST00000619193	FHL2	Q14192	279 aa		4.14	□□□□□ -1.75
RDM1-223	ENST00000619193	LINC00337	Q8N6G1	96 aa		4.14	□□□□□ -1.75
RDM1-223	ENST00000619193	TEX29	Q8N6K0	151 aa		4.14	□□□□□ -1.75
RDM1-223	ENST00000619193	RPL36AL	Q969Q0	106 aa	Known RBP	4.14	□□□□□ -1.75
RDM1-223	ENST00000619193	OBSCN-AS1	Q96MR7	158 aa		4.14	□□□□□ -1.75
RDM1-223	ENST00000619193	FAM110A	Q9BQ89	295 aa		4.14	□□□□□ -1.75
RDM1-223	ENST00000619193	WFDC10A	Q9H1F0	79 aa		4.14	□□□□□ -1.75
RDM1-223	ENST00000619193	IGLV4-60	A0A075B6I1	120 aa		4.13	□□□□□ -1.75
RDM1-223	ENST00000619193	TRBV6-4	A0A1B0GX49	114 aa		4.13	□□□□□ -1.75
RDM1-223	ENST00000619193	CCL24	O00175	119 aa		4.13	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms