RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, human

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-220	ENST00000618606		H7BZZ5	65 aa		0.3	□□□□□ -2.36
TARDBP-220	ENST00000618606	LINC00032	P0C843	101 aa		0.3	□□□□□ -2.36
TARDBP-220	ENST00000618606	SAA2	P0DJI9	122 aa	Predicted RBP	0.3	□□□□□ -2.36
TARDBP-220	ENST00000618606	FAU	P35544	74 aa	Known RBP	0.3	□□□□□ -2.36
TARDBP-220	ENST00000618606	TMEM263	Q8WUH6	116 aa	Known RBP	0.3	□□□□□ -2.36
TARDBP-220	ENST00000618606	UNC79	Q9P2D8	2635 aa		0.3	□□□□□ -2.36
TARDBP-220	ENST00000618606	NAV3	Q8IVL0	2385 aa		0.3	□□□□□ -2.36
TARDBP-220	ENST00000618606	TEX14	Q8IWB6	1497 aa		0.29	□□□□□ -2.36
TARDBP-220	ENST00000618606	MLH3	Q9UHC1	1453 aa		0.29	□□□□□ -2.36
TARDBP-220	ENST00000618606	TTC28	Q96AY4	2481 aa		0.29	□□□□□ -2.36
TARDBP-220	ENST00000618606	SYNE2	Q8WXH0	6885 aa	Known RBP	0.29	□□□□□ -2.36
TARDBP-220	ENST00000618606		A0A087WVE0	104 aa		0.29	□□□□□ -2.36
TARDBP-220	ENST00000618606	C7orf77	A4D0Y5	90 aa		0.29	□□□□□ -2.36
TARDBP-220	ENST00000618606	ATOX1	O00244	68 aa		0.29	□□□□□ -2.36
TARDBP-220	ENST00000618606	NDUFC1	O43677	76 aa		0.29	□□□□□ -2.36
TARDBP-220	ENST00000618606	SERP2	Q8N6R1	65 aa		0.29	□□□□□ -2.36
TARDBP-220	ENST00000618606	LINC01600	Q96MT4	127 aa		0.29	□□□□□ -2.36
TARDBP-220	ENST00000618606	TRGV9	Q99603	122 aa		0.29	□□□□□ -2.36
TARDBP-220	ENST00000618606	CNFN	Q9BYD5	112 aa		0.29	□□□□□ -2.36
TARDBP-220	ENST00000618606	TP53AIP1	Q9HCN2	124 aa		0.29	□□□□□ -2.36
TARDBP-220	ENST00000618606	DST	Q03001	7570 aa	Known RBP	0.29	□□□□□ -2.36
TARDBP-220	ENST00000618606	KDM3B	Q7LBC6	1761 aa		0.29	□□□□□ -2.36
TARDBP-220	ENST00000618606	POLQ	O75417	2590 aa		0.29	□□□□□ -2.36
TARDBP-220	ENST00000618606	PLXNB2	O15031	1838 aa		0.29	□□□□□ -2.36
TARDBP-220	ENST00000618606	KMT2D	O14686	5537 aa		0.29	□□□□□ -2.36
TARDBP-220	ENST00000618606	DIP2C	Q9Y2E4	1556 aa		0.28	□□□□□ -2.36
TARDBP-220	ENST00000618606	PIEZO1	Q92508	2521 aa		0.28	□□□□□ -2.36
TARDBP-220	ENST00000618606	RAPGEF6	Q8TEU7	1601 aa		0.28	□□□□□ -2.36
TARDBP-220	ENST00000618606	ASXL3	Q9C0F0	2248 aa		0.28	□□□□□ -2.36
TARDBP-220	ENST00000618606	ZFHX3	Q15911	3703 aa		0.28	□□□□□ -2.36
TARDBP-220	ENST00000618606	TRBV25-1	A0A075B6N4	114 aa		0.28	□□□□□ -2.36
TARDBP-220	ENST00000618606		I3L2K1	104 aa		0.28	□□□□□ -2.36
TARDBP-220	ENST00000618606	S100A3	P33764	101 aa		0.28	□□□□□ -2.36
TARDBP-220	ENST00000618606	SPCS1	Q9Y6A9	102 aa		0.28	□□□□□ -2.36
TARDBP-220	ENST00000618606	SBF2	Q86WG5	1849 aa		0.28	□□□□□ -2.36
TARDBP-220	ENST00000618606	FYCO1	Q9BQS8	1478 aa		0.28	□□□□□ -2.37
TARDBP-220	ENST00000618606	NRXN1	Q9ULB1	1477 aa		0.28	□□□□□ -2.37
TARDBP-220	ENST00000618606	ARHGEF12	Q9NZN5	1544 aa		0.28	□□□□□ -2.37
TARDBP-220	ENST00000618606	CAD	P27708	2225 aa		0.28	□□□□□ -2.37
TARDBP-220	ENST00000618606	WNK3	Q9BYP7	1800 aa		0.27	□□□□□ -2.37
TARDBP-220	ENST00000618606	FXYD6-FXYD2	A0A087WZ82	144 aa		0.27	□□□□□ -2.37
TARDBP-220	ENST00000618606	LINC00959	A0A1B0GUT2	108 aa		0.27	□□□□□ -2.37
TARDBP-220	ENST00000618606	SYS1-DBNDD2	H3BUS1	97 aa		0.27	□□□□□ -2.37
TARDBP-220	ENST00000618606	UQCRH	P07919	91 aa		0.27	□□□□□ -2.37
TARDBP-220	ENST00000618606	PMCHL1	Q16048	86 aa		0.27	□□□□□ -2.37
TARDBP-220	ENST00000618606		Q5BKY6	102 aa		0.27	□□□□□ -2.37
TARDBP-220	ENST00000618606	PSMG4	Q5JS54	123 aa		0.27	□□□□□ -2.37
TARDBP-220	ENST00000618606	DEFB107A	Q8IZN7	70 aa		0.27	□□□□□ -2.37
TARDBP-220	ENST00000618606	ANK2	Q01484	3957 aa		0.27	□□□□□ -2.37
TARDBP-220	ENST00000618606	TNC	P24821	2201 aa		0.27	□□□□□ -2.37
TARDBP-220	ENST00000618606	CACNA1H	O95180	2353 aa		0.27	□□□□□ -2.37
TARDBP-220	ENST00000618606	GAPVD1	Q14C86	1478 aa		0.27	□□□□□ -2.37
TARDBP-220	ENST00000618606	C1orf167	Q5SNV9	1468 aa		0.27	□□□□□ -2.37
TARDBP-220	ENST00000618606	NLRP1	Q9C000	1473 aa		0.27	□□□□□ -2.37
TARDBP-220	ENST00000618606	TRBV6-1	A0A0K0K1D8	114 aa		0.26	□□□□□ -2.37
TARDBP-220	ENST00000618606	TRBV7-7	A0A0K0K1E9	115 aa		0.26	□□□□□ -2.37
TARDBP-220	ENST00000618606		Q8IZM0	81 aa		0.26	□□□□□ -2.37
TARDBP-220	ENST00000618606	LINC00846	Q9NV44	126 aa		0.26	□□□□□ -2.37
TARDBP-220	ENST00000618606	POLA1	P09884	1462 aa	Predicted RBP	0.26	□□□□□ -2.37
TARDBP-220	ENST00000618606	PLEKHH2	Q8IVE3	1493 aa		0.26	□□□□□ -2.37
TARDBP-220	ENST00000618606	MAGI1	Q96QZ7	1491 aa	Predicted RBP	0.26	□□□□□ -2.37
TARDBP-220	ENST00000618606	FAT4	Q6V0I7	4981 aa		0.26	□□□□□ -2.37
TARDBP-220	ENST00000618606	TCHH	Q07283	1943 aa		0.26	□□□□□ -2.37
TARDBP-220	ENST00000618606	PKD1L2	Q7Z442	2459 aa		0.26	□□□□□ -2.37
TARDBP-220	ENST00000618606	CELSR2	Q9HCU4	2923 aa		0.25	□□□□□ -2.37
TARDBP-220	ENST00000618606	ABCA12	Q86UK0	2595 aa		0.25	□□□□□ -2.37
TARDBP-220	ENST00000618606	CACNA1A	O00555	2505 aa		0.25	□□□□□ -2.37
TARDBP-220	ENST00000618606	C20orf78	Q9BR46	151 aa		0.25	□□□□□ -2.37
TARDBP-220	ENST00000618606	PRO1933	Q9H354	126 aa		0.25	□□□□□ -2.37
TARDBP-220	ENST00000618606	PSENEN	Q9NZ42	101 aa		0.25	□□□□□ -2.37
TARDBP-220	ENST00000618606	HIGD1B	Q9P298	99 aa		0.25	□□□□□ -2.37
TARDBP-220	ENST00000618606	CHD9	Q3L8U1	2897 aa		0.24	□□□□□ -2.37
TARDBP-220	ENST00000618606	MARF1	Q9Y4F3	1742 aa	Known RBP	0.24	□□□□□ -2.37
TARDBP-220	ENST00000618606	RAPGEF2	Q9Y4G8	1499 aa		0.24	□□□□□ -2.37
TARDBP-220	ENST00000618606	UQCRHL	A0A096LP55	91 aa		0.24	□□□□□ -2.37
TARDBP-220	ENST00000618606	PHGR1	C9JFL3	82 aa		0.24	□□□□□ -2.37
TARDBP-220	ENST00000618606	CFD	P00746	253 aa	Predicted RBP	0.24	□□□□□ -2.37
TARDBP-220	ENST00000618606	SPINK1	P00995	79 aa		0.24	□□□□□ -2.37
TARDBP-220	ENST00000618606	ARMS2	P0C7Q2	107 aa		0.24	□□□□□ -2.37
TARDBP-220	ENST00000618606	PIGY	Q3MUY2	71 aa		0.24	□□□□□ -2.37
TARDBP-220	ENST00000618606		Q9H521	79 aa		0.24	□□□□□ -2.37
TARDBP-220	ENST00000618606	FSIP2	Q5CZC0	6907 aa		0.24	□□□□□ -2.37
TARDBP-220	ENST00000618606	UBR4	Q5T4S7	5183 aa		0.24	□□□□□ -2.37
TARDBP-220	ENST00000618606	ANKRD26	Q9UPS8	1709 aa		0.24	□□□□□ -2.37
TARDBP-220	ENST00000618606	PAPPA	Q13219	1627 aa		0.24	□□□□□ -2.37
TARDBP-220	ENST00000618606	BIVM-ERCC5	R4GMW8	1640 aa		0.24	□□□□□ -2.37
TARDBP-220	ENST00000618606	ANKHD1	Q8IWZ3	2542 aa	Known RBP	0.23	□□□□□ -2.37
TARDBP-220	ENST00000618606	FAM208B	Q5VWN6	2430 aa		0.23	□□□□□ -2.37
TARDBP-220	ENST00000618606	TPR	P12270	2363 aa	Known RBP	0.23	□□□□□ -2.37
TARDBP-220	ENST00000618606	TRBV7-4	A0A0J9YYF1	115 aa		0.23	□□□□□ -2.37
TARDBP-220	ENST00000618606		F8WEM9	126 aa		0.23	□□□□□ -2.37
TARDBP-220	ENST00000618606	AKAP12	Q02952	1782 aa		0.23	□□□□□ -2.37
TARDBP-220	ENST00000618606	SMARCA2	P51531	1590 aa		0.23	□□□□□ -2.37
TARDBP-220	ENST00000618606	TULP4	Q9NRJ4	1543 aa		0.23	□□□□□ -2.37
TARDBP-220	ENST00000618606	NUP188	Q5SRE5	1749 aa		0.22	□□□□□ -2.37
TARDBP-220	ENST00000618606	KNDC1	Q76NI1	1749 aa		0.22	□□□□□ -2.37
TARDBP-220	ENST00000618606	NCOR1	O75376	2440 aa		0.22	□□□□□ -2.37
TARDBP-220	ENST00000618606		A0A1B0GU69	56 aa		0.22	□□□□□ -2.37
TARDBP-220	ENST00000618606		H0Y9P7	68 aa		0.22	□□□□□ -2.37
TARDBP-220	ENST00000618606		H3BQF6	201 aa		0.22	□□□□□ -2.37

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