RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 PAGE4O60829 102 aa2.6□□□□□ -1.99
SNCA-213ENST00000618500 PACRGQ96M98 296 aaPredicted RBP2.6□□□□□ -1.99
SNCA-213ENST00000618500 FLGP20930 4061 aaPredicted RBP2.6□□□□□ -1.99
SNCA-213ENST00000618500 NDUFC2-KCTD14E9PQ53 114 aa2.6□□□□□ -1.99
SNCA-213ENST00000618500 HMGB3O15347 200 aaKnown RBP2.6□□□□□ -1.99
SNCA-213ENST00000618500 RPL32P62910 135 aaKnown RBP2.6□□□□□ -1.99
SNCA-213ENST00000618500 C9orf62Q8N4C0 152 aa2.6□□□□□ -1.99
SNCA-213ENST00000618500 MRAP2Q96G30 205 aa2.6□□□□□ -1.99
SNCA-213ENST00000618500 SSPOA2VEC9 5147 aa2.6□□□□□ -1.99
SNCA-213ENST00000618500 MRPS36P82909 103 aaKnown RBP2.59□□□□□ -1.99
SNCA-213ENST00000618500 MBD3L1Q8WWY6 194 aa2.59□□□□□ -1.99
SNCA-213ENST00000618500 MARVELD1Q9BSK0 173 aa2.59□□□□□ -1.99
SNCA-213ENST00000618500 KRTAP3-1Q9BYR8 98 aa2.59□□□□□ -1.99
SNCA-213ENST00000618500 C6orf48Q9UBA6 75 aa2.59□□□□□ -1.99
SNCA-213ENST00000618500 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.59□□□□□ -2
SNCA-213ENST00000618500 IGKV2-29A2NJV5 120 aaPredicted RBP2.59□□□□□ -2
SNCA-213ENST00000618500 PFDN1O60925 122 aa2.59□□□□□ -2
SNCA-213ENST00000618500 SIX6O95475 246 aa2.59□□□□□ -2
SNCA-213ENST00000618500 TSPAN13O95857 204 aa2.59□□□□□ -2
SNCA-213ENST00000618500 RNASEKQ6P5S7 137 aaKnown RBP2.59□□□□□ -2
SNCA-213ENST00000618500 BAGE2Q86Y30 109 aa2.59□□□□□ -2
SNCA-213ENST00000618500 SMIM3Q9BZL3 60 aa2.59□□□□□ -2
SNCA-213ENST00000618500 BORCS7-ASMTA0A0B4J1R7 106 aa2.58□□□□□ -2
SNCA-213ENST00000618500 FAM240BA0A1B0GVZ2 78 aa2.58□□□□□ -2
SNCA-213ENST00000618500 FAM168BA1KXE4 195 aa2.58□□□□□ -2
SNCA-213ENST00000618500 MAP1LC3B2A6NCE7 125 aa2.58□□□□□ -2
SNCA-213ENST00000618500 POLR2KP53803 58 aaKnown RBP2.58□□□□□ -2
SNCA-213ENST00000618500 UBE2BP63146 152 aa2.58□□□□□ -2
SNCA-213ENST00000618500 GNB1LQ9BYB4 327 aa2.58□□□□□ -2
SNCA-213ENST00000618500 MAP1LC3BQ9GZQ8 125 aa2.58□□□□□ -2
SNCA-213ENST00000618500 UBE2D4Q9Y2X8 147 aa2.58□□□□□ -2
SNCA-213ENST00000618500 PPP1R17O96001 155 aa2.58□□□□□ -2
SNCA-213ENST00000618500 C9orf129Q5T035 196 aaKnown RBP2.58□□□□□ -2
SNCA-213ENST00000618500 FAM19A5Q7Z5A7 132 aaPredicted RBP2.58□□□□□ -2
SNCA-213ENST00000618500 FAM19A3Q7Z5A8 133 aa2.58□□□□□ -2
SNCA-213ENST00000618500 FAM19A2Q8N3H0 131 aa2.58□□□□□ -2
SNCA-213ENST00000618500 IGHV3OR16-9A0A0B4J2B5 98 aa2.58□□□□□ -2
SNCA-213ENST00000618500 SDHAF1A6NFY7 115 aa2.58□□□□□ -2
SNCA-213ENST00000618500 KIAA0087Q14695 138 aa2.58□□□□□ -2
SNCA-213ENST00000618500 LRRC37A5PQ49AS3 106 aa2.58□□□□□ -2
SNCA-213ENST00000618500 LINC00337Q8N6G1 96 aa2.58□□□□□ -2
SNCA-213ENST00000618500 C7orf77A4D0Y5 90 aa2.57□□□□□ -2
SNCA-213ENST00000618500 UBE2G2P60604 165 aa2.57□□□□□ -2
SNCA-213ENST00000618500 TMEM18Q96B42 140 aa2.57□□□□□ -2
SNCA-213ENST00000618500 MANBALQ9NQG1 85 aa2.57□□□□□ -2
SNCA-213ENST00000618500 CHTOPQ9Y3Y2 248 aaKnown RBP2.57□□□□□ -2
SNCA-213ENST00000618500 PPP1R2P9O14990 202 aa2.57□□□□□ -2
SNCA-213ENST00000618500 PMCHP20382 165 aa2.57□□□□□ -2
SNCA-213ENST00000618500 AKR1C8PQ5T2L2 129 aa2.57□□□□□ -2
SNCA-213ENST00000618500 LYZL1Q6UWQ5 148 aa2.57□□□□□ -2
SNCA-213ENST00000618500 ORAOV1Q8WV07 137 aa2.57□□□□□ -2
SNCA-213ENST00000618500 IGKV3OR2-268A0A0C4DH90 116 aa2.56□□□□□ -2
SNCA-213ENST00000618500 UPK1BO75841 260 aa2.56□□□□□ -2
SNCA-213ENST00000618500 FOXA3P55318 350 aaPredicted RBP2.56□□□□□ -2
SNCA-213ENST00000618500 SMIM15Q7Z3B0 74 aa2.56□□□□□ -2
SNCA-213ENST00000618500 S100ZQ8WXG8 99 aa2.56□□□□□ -2
SNCA-213ENST00000618500 ST20Q9HBF5 79 aa2.56□□□□□ -2
SNCA-213ENST00000618500 SPANXA1Q9NS26 97 aa2.56□□□□□ -2
SNCA-213ENST00000618500 UMAD1C9J7I0 102 aa2.56□□□□□ -2
SNCA-213ENST00000618500 INMT-MINDY4F8WBC2 141 aa2.56□□□□□ -2
SNCA-213ENST00000618500 CFC1P0CG37 223 aa2.56□□□□□ -2
SNCA-213ENST00000618500 CCL20P78556 96 aa2.56□□□□□ -2
SNCA-213ENST00000618500 NDUFA12Q9UI09 145 aa2.56□□□□□ -2
SNCA-213ENST00000618500 C22orf24Q9Y442 160 aa2.56□□□□□ -2
SNCA-213ENST00000618500 IFNA1P01562 189 aa2.55□□□□□ -2
SNCA-213ENST00000618500 RPL35P42766 123 aaKnown RBP2.55□□□□□ -2
SNCA-213ENST00000618500 MRPL55Q7Z7F7 128 aaKnown RBP2.55□□□□□ -2
SNCA-213ENST00000618500 ENKURQ8TC29 256 aa2.55□□□□□ -2
SNCA-213ENST00000618500 RPL39LQ96EH5 51 aaKnown RBP2.55□□□□□ -2
SNCA-213ENST00000618500 KIR2DL4Q99706 377 aa2.55□□□□□ -2
SNCA-213ENST00000618500 GEMIN7Q9H840 131 aaKnown RBP2.55□□□□□ -2
SNCA-213ENST00000618500 TMEM242Q9NWH2 141 aa2.55□□□□□ -2
SNCA-213ENST00000618500 NDUFA13Q9P0J0 144 aa2.55□□□□□ -2
SNCA-213ENST00000618500 IGKV2D-26A0A0A0MRZ7 120 aa2.55□□□□□ -2
SNCA-213ENST00000618500 VCYO14598 125 aa2.55□□□□□ -2
SNCA-213ENST00000618500 SPINK1P00995 79 aa2.55□□□□□ -2
SNCA-213ENST00000618500 OPRPNQ99935 248 aaPredicted RBP2.55□□□□□ -2
SNCA-213ENST00000618500 ALKBH7Q9BT30 221 aaPredicted RBP2.55□□□□□ -2
SNCA-213ENST00000618500 S100A6P06703 90 aa2.55□□□□□ -2
SNCA-213ENST00000618500 GIPP09681 153 aaPredicted RBP2.55□□□□□ -2
SNCA-213ENST00000618500 C10orf25Q5T742 122 aa2.55□□□□□ -2
SNCA-213ENST00000618500 FAM231DQ6ZW35 169 aa2.55□□□□□ -2
SNCA-213ENST00000618500 TMUB2Q71RG4 321 aa2.55□□□□□ -2
SNCA-213ENST00000618500 FAM104AQ969W3 186 aa2.55□□□□□ -2
SNCA-213ENST00000618500 RETNLBQ9BQ08 111 aa2.55□□□□□ -2
SNCA-213ENST00000618500 PDE6DO43924 150 aa2.54□□□□□ -2
SNCA-213ENST00000618500 CENPWQ5EE01 88 aa2.54□□□□□ -2
SNCA-213ENST00000618500 CST9LP1Q5W188 147 aa2.54□□□□□ -2
SNCA-213ENST00000618500 UNQ6190/PRO20217Q6UXQ8 127 aa2.54□□□□□ -2
SNCA-213ENST00000618500 TMEM191AQ9H0A3 160 aa2.54□□□□□ -2
SNCA-213ENST00000618500 ZNF727A8MUV8 499 aa2.54□□□□□ -2
SNCA-213ENST00000618500 CXCL5P42830 114 aa2.54□□□□□ -2
SNCA-213ENST00000618500 HBBP68871 147 aa2.54□□□□□ -2
SNCA-213ENST00000618500 TWIST1Q15672 202 aa2.54□□□□□ -2
SNCA-213ENST00000618500 RPL7L1Q6DKI1 246 aaKnown RBP2.54□□□□□ -2
SNCA-213ENST00000618500 ERASQ7Z444 233 aa2.54□□□□□ -2
SNCA-213ENST00000618500 Q8IZM0 81 aa2.54□□□□□ -2
SNCA-213ENST00000618500 PYGO1Q9Y3Y4 419 aa2.54□□□□□ -2
SNCA-213ENST00000618500 MUC21A0A140T8X8 626 aa2.53□□□□□ -2
SNCA-213ENST00000618500 SSNA1O43805 119 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms