RNA–Protein interactions for RNA: ENST00000618166.4

SCAMP1-206, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 2 BASIC

Gene SCAMP1, Length 1,358 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-206ENST00000618166 RAB32Q13637 225 aa3.5□□□□□ -1.85
SCAMP1-206ENST00000618166 TWIST1Q15672 202 aa3.5□□□□□ -1.85
SCAMP1-206ENST00000618166 TMUB2Q71RG4 321 aa3.5□□□□□ -1.85
SCAMP1-206ENST00000618166 SLC7A5P1Q8MH63 180 aa3.5□□□□□ -1.85
SCAMP1-206ENST00000618166 LINC00469Q8N7U9 141 aa3.5□□□□□ -1.85
SCAMP1-206ENST00000618166 C5orf17Q8NAS9 161 aa3.5□□□□□ -1.85
SCAMP1-206ENST00000618166 TNFSF18Q9UNG2 199 aa3.5□□□□□ -1.85
SCAMP1-206ENST00000618166 ARPC5O15511 151 aa3.49□□□□□ -1.85
SCAMP1-206ENST00000618166 OR5AL1P0C617 328 aa3.49□□□□□ -1.85
SCAMP1-206ENST00000618166 SMIM17P0DL12 118 aa3.49□□□□□ -1.85
SCAMP1-206ENST00000618166 SPANXN1Q5VSR9 72 aa3.49□□□□□ -1.85
SCAMP1-206ENST00000618166 TEX261Q6UWH6 196 aa3.49□□□□□ -1.85
SCAMP1-206ENST00000618166 TMEM252Q8N6L7 170 aa3.49□□□□□ -1.85
SCAMP1-206ENST00000618166 ORAOV1Q8WV07 137 aa3.49□□□□□ -1.85
SCAMP1-206ENST00000618166 EPDR1Q9UM22 224 aa3.49□□□□□ -1.85
SCAMP1-206ENST00000618166 GAGE10A6NGK3 116 aa3.48□□□□□ -1.85
SCAMP1-206ENST00000618166 TAS2R45P59539 299 aa3.48□□□□□ -1.85
SCAMP1-206ENST00000618166 UBE2G2P60604 165 aa3.48□□□□□ -1.85
SCAMP1-206ENST00000618166 LBHQ53QV2 105 aaPredicted RBP3.48□□□□□ -1.85
SCAMP1-206ENST00000618166 RNASE13Q5GAN3 156 aaKnown RBP3.48□□□□□ -1.85
SCAMP1-206ENST00000618166 RASL11AQ6T310 242 aa3.48□□□□□ -1.85
SCAMP1-206ENST00000618166 MRPL55Q7Z7F7 128 aaKnown RBP3.48□□□□□ -1.85
SCAMP1-206ENST00000618166 FAM19A2Q8N3H0 131 aa3.48□□□□□ -1.85
SCAMP1-206ENST00000618166 KCNRGQ8N5I3 272 aa3.48□□□□□ -1.85
SCAMP1-206ENST00000618166 NRACQ8N912 160 aa3.48□□□□□ -1.85
SCAMP1-206ENST00000618166 PLEKHB2Q96CS7 222 aa3.48□□□□□ -1.85
SCAMP1-206ENST00000618166 CYTL1Q9NRR1 136 aa3.48□□□□□ -1.85
SCAMP1-206ENST00000618166 NDUFC2-KCTD14E9PQ53 114 aa3.47□□□□□ -1.85
SCAMP1-206ENST00000618166 SNAI2O43623 268 aa3.47□□□□□ -1.85
SCAMP1-206ENST00000618166 ATP6V1G1O75348 118 aa3.47□□□□□ -1.85
SCAMP1-206ENST00000618166 OR10D4PQ8NGN7 298 aa3.47□□□□□ -1.85
SCAMP1-206ENST00000618166 LINC00167Q96N53 147 aa3.47□□□□□ -1.85
SCAMP1-206ENST00000618166 AP1S3Q96PC3 154 aa3.47□□□□□ -1.85
SCAMP1-206ENST00000618166 XAGE1AQ9HD64 81 aa3.47□□□□□ -1.85
SCAMP1-206ENST00000618166 NIT2Q9NQR4 276 aa3.47□□□□□ -1.85
SCAMP1-206ENST00000618166 CDC42SE2Q9NRR3 84 aa3.47□□□□□ -1.85
SCAMP1-206ENST00000618166 SLC25A20O43772 301 aa3.46□□□□□ -1.86
SCAMP1-206ENST00000618166 APCSP02743 223 aa3.46□□□□□ -1.86
SCAMP1-206ENST00000618166 ZNF25P17030 456 aaPredicted RBP3.46□□□□□ -1.86
SCAMP1-206ENST00000618166 HBG1P69891 147 aa3.46□□□□□ -1.86
SCAMP1-206ENST00000618166 HBG2P69892 147 aa3.46□□□□□ -1.86
SCAMP1-206ENST00000618166 ZNF345Q14585 488 aa3.46□□□□□ -1.86
SCAMP1-206ENST00000618166 TMEM241Q24JQ0 296 aa3.46□□□□□ -1.86
SCAMP1-206ENST00000618166 C2orf82Q6UX34 121 aa3.46□□□□□ -1.86
SCAMP1-206ENST00000618166 ALKAL2Q6UX46 152 aa3.46□□□□□ -1.86
SCAMP1-206ENST00000618166 TMEM101Q96IK0 257 aa3.46□□□□□ -1.86
SCAMP1-206ENST00000618166 BTF3L4Q96K17 158 aa3.46□□□□□ -1.86
SCAMP1-206ENST00000618166 PACRGQ96M98 296 aaPredicted RBP3.46□□□□□ -1.86
SCAMP1-206ENST00000618166 WDR61Q9GZS3 305 aaKnown RBP3.46□□□□□ -1.86
SCAMP1-206ENST00000618166 TRAV13-1A0A0B4J241 112 aa3.45□□□□□ -1.86
SCAMP1-206ENST00000618166 H7C423 109 aa3.45□□□□□ -1.86
SCAMP1-206ENST00000618166 ARL14EPLP0DKL9 152 aa3.45□□□□□ -1.86
SCAMP1-206ENST00000618166 SPRR2EP22531 72 aa3.45□□□□□ -1.86
SCAMP1-206ENST00000618166 SPRR2BP35325 72 aa3.45□□□□□ -1.86
SCAMP1-206ENST00000618166 SPRR2AP35326 72 aa3.45□□□□□ -1.86
SCAMP1-206ENST00000618166 ATP6V1FQ16864 119 aa3.45□□□□□ -1.86
SCAMP1-206ENST00000618166 RPL7L1Q6DKI1 246 aaKnown RBP3.45□□□□□ -1.86
SCAMP1-206ENST00000618166 SLC51BQ86UW2 128 aa3.45□□□□□ -1.86
SCAMP1-206ENST00000618166 STX12Q86Y82 276 aa3.45□□□□□ -1.86
SCAMP1-206ENST00000618166 LINC00862A6NCI5 91 aa3.44□□□□□ -1.86
SCAMP1-206ENST00000618166 C1orf196B1AJZ1 125 aa3.44□□□□□ -1.86
SCAMP1-206ENST00000618166 TEX46H3BTG2 121 aa3.44□□□□□ -1.86
SCAMP1-206ENST00000618166 RPL37P61927 97 aaKnown RBP3.44□□□□□ -1.86
SCAMP1-206ENST00000618166 PNRC1Q12796 327 aaPredicted RBP3.44□□□□□ -1.86
SCAMP1-206ENST00000618166 CLLU1Q5K131 121 aa3.44□□□□□ -1.86
SCAMP1-206ENST00000618166 PQLC2Q6ZP29 291 aa3.44□□□□□ -1.86
SCAMP1-206ENST00000618166 STOML3Q8TAV4 291 aa3.44□□□□□ -1.86
SCAMP1-206ENST00000618166 SMIM3Q9BZL3 60 aa3.44□□□□□ -1.86
SCAMP1-206ENST00000618166 KANTRA0A1W2PQU2 76 aa3.43□□□□□ -1.86
SCAMP1-206ENST00000618166 NDUFA5Q16718 116 aa3.43□□□□□ -1.86
SCAMP1-206ENST00000618166 COX8CQ7Z4L0 72 aa3.43□□□□□ -1.86
SCAMP1-206ENST00000618166 SPRR4Q96PI1 79 aa3.43□□□□□ -1.86
SCAMP1-206ENST00000618166 TP73-AS1Q9UF72 201 aa3.43□□□□□ -1.86
SCAMP1-206ENST00000618166 SCO1O75880 301 aa3.42□□□□□ -1.86
SCAMP1-206ENST00000618166 PET100P0DJ07 73 aa3.42□□□□□ -1.86
SCAMP1-206ENST00000618166 FOXA3P55318 350 aaPredicted RBP3.42□□□□□ -1.86
SCAMP1-206ENST00000618166 RPS29P62273 56 aaKnown RBP3.42□□□□□ -1.86
SCAMP1-206ENST00000618166 KIAA0087Q14695 138 aa3.42□□□□□ -1.86
SCAMP1-206ENST00000618166 LYZL1Q6UWQ5 148 aa3.42□□□□□ -1.86
SCAMP1-206ENST00000618166 FAM19A1Q7Z5A9 133 aa3.42□□□□□ -1.86
SCAMP1-206ENST00000618166 RPL39LQ96EH5 51 aaKnown RBP3.42□□□□□ -1.86
SCAMP1-206ENST00000618166 KCNIP2Q9NS61 270 aa3.42□□□□□ -1.86
SCAMP1-206ENST00000618166 IGKV2-28A0A075B6P5 120 aa3.41□□□□□ -1.86
SCAMP1-206ENST00000618166 ZNF727A8MUV8 499 aa3.41□□□□□ -1.86
SCAMP1-206ENST00000618166 C17orf112F2Z3M2 114 aa3.41□□□□□ -1.86
SCAMP1-206ENST00000618166 F8WDY8 70 aa3.41□□□□□ -1.86
SCAMP1-206ENST00000618166 NCR2O95944 276 aa3.41□□□□□ -1.86
SCAMP1-206ENST00000618166 IGKV2D-28P01615 120 aa3.41□□□□□ -1.86
SCAMP1-206ENST00000618166 IGLV6-57P01721 117 aa3.41□□□□□ -1.86
SCAMP1-206ENST00000618166 FHITP49789 147 aa3.41□□□□□ -1.86
SCAMP1-206ENST00000618166 KRTAP10-12P60413 245 aa3.41□□□□□ -1.86
SCAMP1-206ENST00000618166 COMMD7Q86VX2 200 aa3.41□□□□□ -1.86
SCAMP1-206ENST00000618166 TRBV30A0A0K0K1B3 111 aa3.4□□□□□ -1.86
SCAMP1-206ENST00000618166 A0A1W2PPV4 95 aa3.4□□□□□ -1.86
SCAMP1-206ENST00000618166 PRSS47A8MTI9 375 aa3.4□□□□□ -1.86
SCAMP1-206ENST00000618166 TMEM238C9JI98 176 aa3.4□□□□□ -1.86
SCAMP1-206ENST00000618166 PEX7O00628 323 aa3.4□□□□□ -1.86
SCAMP1-206ENST00000618166 PVALBP20472 110 aaPredicted RBP3.4□□□□□ -1.86
SCAMP1-206ENST00000618166 GCHFRP30047 84 aa3.4□□□□□ -1.86
SCAMP1-206ENST00000618166 RPS20P60866 119 aaKnown RBP3.4□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms