RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 CUL9Q8IWT3 2517 aa5.33□□□□□ -1.56
PDE6A-205ENST00000617647 BCE1O60756 84 aa5.33□□□□□ -1.56
PDE6A-205ENST00000617647 CCL18P55774 89 aa5.33□□□□□ -1.56
PDE6A-205ENST00000617647 PRR15Q8IV56 129 aa5.33□□□□□ -1.56
PDE6A-205ENST00000617647 ITLN2Q8WWU7 325 aaPredicted RBP5.33□□□□□ -1.56
PDE6A-205ENST00000617647 CELA1Q9UNI1 258 aa5.33□□□□□ -1.56
PDE6A-205ENST00000617647 PKD1L2Q7Z442 2459 aa5.33□□□□□ -1.56
PDE6A-205ENST00000617647 TECTAO75443 2155 aa5.33□□□□□ -1.56
PDE6A-205ENST00000617647 IGHV4-28A0A0C4DH34 117 aa5.32□□□□□ -1.56
PDE6A-205ENST00000617647 SMIM1B2RUZ4 78 aa5.32□□□□□ -1.56
PDE6A-205ENST00000617647 PDE6GP18545 87 aa5.32□□□□□ -1.56
PDE6A-205ENST00000617647 LINC00242Q5T6M2 205 aa5.32□□□□□ -1.56
PDE6A-205ENST00000617647 NTM-AS1Q6ZSK4 140 aa5.32□□□□□ -1.56
PDE6A-205ENST00000617647 HIGD2AQ9BW72 106 aa5.32□□□□□ -1.56
PDE6A-205ENST00000617647 DMDP11532 3685 aa5.32□□□□□ -1.56
PDE6A-205ENST00000617647 C16orf95Q9H693 158 aa5.32□□□□□ -1.56
PDE6A-205ENST00000617647 FAM30AQ9NZY2 134 aa5.32□□□□□ -1.56
PDE6A-205ENST00000617647 TRGV2A0A075B6R0 118 aa5.32□□□□□ -1.56
PDE6A-205ENST00000617647 C11orf72Q8NBR9 251 aa5.32□□□□□ -1.56
PDE6A-205ENST00000617647 SPENQ96T58 3664 aaKnown RBP5.31□□□□□ -1.56
PDE6A-205ENST00000617647 TRIOBPQ9H2D6 2365 aa5.31□□□□□ -1.56
PDE6A-205ENST00000617647 APOC4P55056 127 aa5.31□□□□□ -1.56
PDE6A-205ENST00000617647 FAM229BQ4G0N7 80 aa5.31□□□□□ -1.56
PDE6A-205ENST00000617647 C6orf99Q4VX62 202 aa5.31□□□□□ -1.56
PDE6A-205ENST00000617647 Q8N814 137 aa5.31□□□□□ -1.56
PDE6A-205ENST00000617647 BEAN1Q3B7T3 259 aa5.31□□□□□ -1.56
PDE6A-205ENST00000617647 Q8N9W7 124 aa5.31□□□□□ -1.56
PDE6A-205ENST00000617647 MINOS1-NBL1R4GNA1 71 aa5.31□□□□□ -1.56
PDE6A-205ENST00000617647 TRIOO75962 3097 aa5.31□□□□□ -1.56
PDE6A-205ENST00000617647 COL27A1Q8IZC6 1860 aaPredicted RBP5.31□□□□□ -1.56
PDE6A-205ENST00000617647 PRR15LQ9BU68 103 aa5.3□□□□□ -1.56
PDE6A-205ENST00000617647 RBM12B-AS1Q9P1G2 102 aa5.3□□□□□ -1.56
PDE6A-205ENST00000617647 NBEAQ8NFP9 2946 aa5.3□□□□□ -1.56
PDE6A-205ENST00000617647 ZNF843Q8N446 348 aa5.3□□□□□ -1.56
PDE6A-205ENST00000617647 Q8N9L7 120 aa5.3□□□□□ -1.56
PDE6A-205ENST00000617647 NDUFS5O43920 106 aa5.29□□□□□ -1.56
PDE6A-205ENST00000617647 CHCHD7Q9BUK0 85 aa5.29□□□□□ -1.56
PDE6A-205ENST00000617647 E7EQL1 145 aa5.29□□□□□ -1.56
PDE6A-205ENST00000617647 DEFB131AP59861 70 aa5.29□□□□□ -1.56
PDE6A-205ENST00000617647 NBASA2RRP1 2371 aa5.29□□□□□ -1.56
PDE6A-205ENST00000617647 A8MUN3 132 aa5.29□□□□□ -1.56
PDE6A-205ENST00000617647 KLLNB2CW77 178 aa5.29□□□□□ -1.56
PDE6A-205ENST00000617647 KTN1-AS1Q86SY8 53 aa5.29□□□□□ -1.56
PDE6A-205ENST00000617647 LINC01560Q8TB33 94 aa5.29□□□□□ -1.56
PDE6A-205ENST00000617647 PRUNE2Q8WUY3 3088 aa5.29□□□□□ -1.56
PDE6A-205ENST00000617647 TRGV4A0A0C4DH28 118 aa5.28□□□□□ -1.56
PDE6A-205ENST00000617647 IBA57-AS1B1ANH7 110 aa5.28□□□□□ -1.56
PDE6A-205ENST00000617647 CLPSL2Q6UWE3 100 aa5.28□□□□□ -1.56
PDE6A-205ENST00000617647 LINC00269Q8N2A0 174 aa5.28□□□□□ -1.56
PDE6A-205ENST00000617647 HIGD2BQ4VC39 106 aa5.28□□□□□ -1.56
PDE6A-205ENST00000617647 Q6ZQY7 126 aa5.28□□□□□ -1.56
PDE6A-205ENST00000617647 USMG5Q96IX5 58 aa5.28□□□□□ -1.56
PDE6A-205ENST00000617647 UBE2E2Q96LR5 201 aa5.28□□□□□ -1.56
PDE6A-205ENST00000617647 RAI1Q7Z5J4 1906 aaPredicted RBP5.28□□□□□ -1.56
PDE6A-205ENST00000617647 PRR3P79522 188 aaKnown RBP5.28□□□□□ -1.56
PDE6A-205ENST00000617647 IGFL2Q6UWQ7 119 aa5.27□□□□□ -1.57
PDE6A-205ENST00000617647 GPR179Q6PRD1 2367 aa5.27□□□□□ -1.57
PDE6A-205ENST00000617647 TRBV6-4A0A1B0GX49 114 aa5.27□□□□□ -1.57
PDE6A-205ENST00000617647 CXCL6P80162 114 aa5.27□□□□□ -1.57
PDE6A-205ENST00000617647 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.27□□□□□ -1.57
PDE6A-205ENST00000617647 BBC3Q96PG8 261 aaPredicted RBP5.27□□□□□ -1.57
PDE6A-205ENST00000617647 WNK1Q9H4A3 2382 aa5.27□□□□□ -1.57
PDE6A-205ENST00000617647 H3BS24 57 aa5.27□□□□□ -1.57
PDE6A-205ENST00000617647 IGLV5-39A0A0G2JS06 123 aa5.26□□□□□ -1.57
PDE6A-205ENST00000617647 PRM2P04554 102 aa5.26□□□□□ -1.57
PDE6A-205ENST00000617647 MP68P56378 58 aa5.26□□□□□ -1.57
PDE6A-205ENST00000617647 C6orf223Q8N319 242 aa5.26□□□□□ -1.57
PDE6A-205ENST00000617647 Q9UF83 564 aa5.26□□□□□ -1.57
PDE6A-205ENST00000617647 IGKV2-28A0A075B6P5 120 aa5.26□□□□□ -1.57
PDE6A-205ENST00000617647 C3orf84H3BNL1 204 aa5.26□□□□□ -1.57
PDE6A-205ENST00000617647 C19orf84I3L1E1 186 aa5.26□□□□□ -1.57
PDE6A-205ENST00000617647 IGKV2D-28P01615 120 aa5.26□□□□□ -1.57
PDE6A-205ENST00000617647 C11orf44Q8N8P7 122 aa5.26□□□□□ -1.57
PDE6A-205ENST00000617647 Q6ZRU5 148 aa5.25□□□□□ -1.57
PDE6A-205ENST00000617647 DEFB105AQ8NG35 78 aa5.25□□□□□ -1.57
PDE6A-205ENST00000617647 MUC4Q99102 2169 aa5.25□□□□□ -1.57
PDE6A-205ENST00000617647 TRAV22A0A0B4J277 110 aa5.25□□□□□ -1.57
PDE6A-205ENST00000617647 C22orf24Q9Y442 160 aa5.25□□□□□ -1.57
PDE6A-205ENST00000617647 HCG22E2RYF7 251 aa5.25□□□□□ -1.57
PDE6A-205ENST00000617647 DIRC1Q969H9 104 aa5.24□□□□□ -1.57
PDE6A-205ENST00000617647 K7EQD1 137 aa5.24□□□□□ -1.57
PDE6A-205ENST00000617647 ZNF73O43830 326 aaPredicted RBP5.24□□□□□ -1.57
PDE6A-205ENST00000617647 BRD3OSQ6XYD6 125 aa5.24□□□□□ -1.57
PDE6A-205ENST00000617647 SEM1Q6ZVN7 128 aa5.24□□□□□ -1.57
PDE6A-205ENST00000617647 FAM215AQ9Y5M1 114 aa5.24□□□□□ -1.57
PDE6A-205ENST00000617647 FREM2Q5SZK8 3169 aa5.24□□□□□ -1.57
PDE6A-205ENST00000617647 Q6ZQT0 140 aa5.24□□□□□ -1.57
PDE6A-205ENST00000617647 PRO3102Q9H379 93 aa5.24□□□□□ -1.57
PDE6A-205ENST00000617647 C11orf45Q8TAV5 145 aa5.23□□□□□ -1.57
PDE6A-205ENST00000617647 A8MTW9 85 aa5.23□□□□□ -1.57
PDE6A-205ENST00000617647 IGFL3Q6UXB1 125 aa5.23□□□□□ -1.57
PDE6A-205ENST00000617647 C1orf64Q8NEQ6 169 aa5.23□□□□□ -1.57
PDE6A-205ENST00000617647 H3BQ85 93 aa5.23□□□□□ -1.57
PDE6A-205ENST00000617647 Q6ZSN1 163 aa5.23□□□□□ -1.57
PDE6A-205ENST00000617647 OBSCN-AS1Q96MR7 158 aa5.22□□□□□ -1.57
PDE6A-205ENST00000617647 IGLV5-45A0A087WSX0 123 aa5.22□□□□□ -1.57
PDE6A-205ENST00000617647 MUC7Q8TAX7 377 aa5.22□□□□□ -1.57
PDE6A-205ENST00000617647 CDC42SE2Q9NRR3 84 aa5.22□□□□□ -1.57
PDE6A-205ENST00000617647 EPM2AB3EWF7 344 aa5.22□□□□□ -1.57
PDE6A-205ENST00000617647 H3BUX3 64 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms