RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 DNAL4O96015 105 aa9.53□□□□□ -0.88
MSH6-214ENST00000616033 MTORP42345 2549 aa9.52□□□□□ -0.88
MSH6-214ENST00000616033 PFN2P35080 140 aa9.52□□□□□ -0.89
MSH6-214ENST00000616033 TEX15Q9BXT5 2789 aa9.51□□□□□ -0.89
MSH6-214ENST00000616033 IGHV4-30-2A0A087WSY4 118 aa9.51□□□□□ -0.89
MSH6-214ENST00000616033 LINC00158P58513 81 aa9.51□□□□□ -0.89
MSH6-214ENST00000616033 A6NDX4 124 aa9.5□□□□□ -0.89
MSH6-214ENST00000616033 PYGO1Q9Y3Y4 419 aa9.5□□□□□ -0.89
MSH6-214ENST00000616033 TRBV7-7A0A0K0K1E9 115 aa9.5□□□□□ -0.89
MSH6-214ENST00000616033 C9orf129Q5T035 196 aaKnown RBP9.5□□□□□ -0.89
MSH6-214ENST00000616033 LINC00336Q6ZUF6 198 aa9.5□□□□□ -0.89
MSH6-214ENST00000616033 TRAV23DV6A0A075B6W5 121 aa9.49□□□□□ -0.89
MSH6-214ENST00000616033 DEFB112Q30KQ8 113 aa9.49□□□□□ -0.89
MSH6-214ENST00000616033 LINC00643Q86TS7 51 aa9.49□□□□□ -0.89
MSH6-214ENST00000616033 SPANXA1Q9NS26 97 aa9.49□□□□□ -0.89
MSH6-214ENST00000616033 FAM236DA0A1B0GTK5 79 aa9.49□□□□□ -0.89
MSH6-214ENST00000616033 FAM236CP0DP71 79 aa9.49□□□□□ -0.89
MSH6-214ENST00000616033 HILS1P60008 231 aa9.49□□□□□ -0.89
MSH6-214ENST00000616033 LINC00242Q5T6M2 205 aa9.49□□□□□ -0.89
MSH6-214ENST00000616033 C20orf197Q8N268 126 aa9.49□□□□□ -0.89
MSH6-214ENST00000616033 BRK1Q8WUW1 75 aa9.49□□□□□ -0.89
MSH6-214ENST00000616033 NDUFA1O15239 70 aa9.49□□□□□ -0.89
MSH6-214ENST00000616033 IGLV1-40P01703 118 aa9.49□□□□□ -0.89
MSH6-214ENST00000616033 CRPP02741 224 aa9.48□□□□□ -0.89
MSH6-214ENST00000616033 FAM240AA0A1B0GVK7 77 aa9.48□□□□□ -0.89
MSH6-214ENST00000616033 ZNF415Q09FC8 603 aa9.48□□□□□ -0.89
MSH6-214ENST00000616033 MIR7-3HGQ8N6C7 128 aa9.48□□□□□ -0.89
MSH6-214ENST00000616033 CCL19Q99731 98 aa9.48□□□□□ -0.89
MSH6-214ENST00000616033 RBMY1BA6NDE4 496 aaKnown RBP9.47□□□□□ -0.89
MSH6-214ENST00000616033 RBMY1EA6NEQ0 496 aaKnown RBP9.47□□□□□ -0.89
MSH6-214ENST00000616033 RBMY1DP0C7P1 496 aaKnown RBP9.47□□□□□ -0.89
MSH6-214ENST00000616033 KLK9Q2XQG4 91 aa9.47□□□□□ -0.89
MSH6-214ENST00000616033 K7EMT4 169 aa9.47□□□□□ -0.89
MSH6-214ENST00000616033 NCR3O14931 201 aa9.47□□□□□ -0.89
MSH6-214ENST00000616033 MRAPQ8TCY5 172 aa9.47□□□□□ -0.89
MSH6-214ENST00000616033 ACANP16112 2415 aa9.47□□□□□ -0.89
MSH6-214ENST00000616033 A0A087WYN8 130 aa9.46□□□□□ -0.89
MSH6-214ENST00000616033 DYNLRB2Q8TF09 96 aa9.46□□□□□ -0.89
MSH6-214ENST00000616033 UBE2L6O14933 153 aa9.46□□□□□ -0.9
MSH6-214ENST00000616033 PAX4O43316 350 aa9.46□□□□□ -0.9
MSH6-214ENST00000616033 BBC3Q96PG8 261 aaPredicted RBP9.46□□□□□ -0.9
MSH6-214ENST00000616033 A0A1W2PRX2 142 aa9.46□□□□□ -0.9
MSH6-214ENST00000616033 LECT2O14960 151 aa9.46□□□□□ -0.9
MSH6-214ENST00000616033 S100A7L2Q5SY68 101 aa9.46□□□□□ -0.9
MSH6-214ENST00000616033 GCN1Q92616 2671 aaKnown RBP9.45□□□□□ -0.9
MSH6-214ENST00000616033 SMIM1B2RUZ4 78 aa9.45□□□□□ -0.9
MSH6-214ENST00000616033 MALP21145 153 aa9.45□□□□□ -0.9
MSH6-214ENST00000616033 PSMB8P28062 276 aa9.45□□□□□ -0.9
MSH6-214ENST00000616033 SND1-IT1Q9HBX3 110 aa9.45□□□□□ -0.9
MSH6-214ENST00000616033 MSMBP08118 114 aa9.44□□□□□ -0.9
MSH6-214ENST00000616033 TMEM243Q9BU79 118 aa9.44□□□□□ -0.9
MSH6-214ENST00000616033 H3BUA1 57 aa9.44□□□□□ -0.9
MSH6-214ENST00000616033 ATOX1O00244 68 aa9.44□□□□□ -0.9
MSH6-214ENST00000616033 ACYP1P07311 99 aa9.44□□□□□ -0.9
MSH6-214ENST00000616033 C5orf38Q86SI9 138 aa9.44□□□□□ -0.9
MSH6-214ENST00000616033 LINC00337Q8N6G1 96 aa9.43□□□□□ -0.9
MSH6-214ENST00000616033 LOC100131303A0A0U1RQF7 123 aa9.43□□□□□ -0.9
MSH6-214ENST00000616033 RPL36AP83881 106 aaKnown RBP9.43□□□□□ -0.9
MSH6-214ENST00000616033 RPL36ALQ969Q0 106 aaKnown RBP9.43□□□□□ -0.9
MSH6-214ENST00000616033 C2orf48Q96LS8 159 aa9.43□□□□□ -0.9
MSH6-214ENST00000616033 Q5XG85 94 aa9.43□□□□□ -0.9
MSH6-214ENST00000616033 Q6ZTI0 123 aa9.43□□□□□ -0.9
MSH6-214ENST00000616033 USP17L23D6RBM5 183 aa9.42□□□□□ -0.9
MSH6-214ENST00000616033 PLA2G2AP14555 144 aa9.42□□□□□ -0.9
MSH6-214ENST00000616033 CLPSL2Q6UWE3 100 aa9.42□□□□□ -0.9
MSH6-214ENST00000616033 Q96MF0 132 aa9.42□□□□□ -0.9
MSH6-214ENST00000616033 SNURFQ9Y675 71 aa9.42□□□□□ -0.9
MSH6-214ENST00000616033 DEFB121Q5J5C9 76 aa9.42□□□□□ -0.9
MSH6-214ENST00000616033 HIST2H2BCQ6DN03 193 aa9.42□□□□□ -0.9
MSH6-214ENST00000616033 MPLKIPQ8TAP9 179 aa9.42□□□□□ -0.9
MSH6-214ENST00000616033 INAFM2P0DMQ5 153 aa9.41□□□□□ -0.9
MSH6-214ENST00000616033 FHL2Q14192 279 aa9.41□□□□□ -0.9
MSH6-214ENST00000616033 SMIM11BQ8TCY0 68 aa9.41□□□□□ -0.9
MSH6-214ENST00000616033 LINC00846Q9NV44 126 aa9.41□□□□□ -0.9
MSH6-214ENST00000616033 RPL18AQ02543 176 aaKnown RBP9.41□□□□□ -0.9
MSH6-214ENST00000616033 HIVEP2P31629 2446 aa9.4□□□□□ -0.9
MSH6-214ENST00000616033 TRGV2A0A075B6R0 118 aa9.4□□□□□ -0.91
MSH6-214ENST00000616033 GHRHP01286 108 aa9.4□□□□□ -0.91
MSH6-214ENST00000616033 CRYGAP11844 174 aa9.4□□□□□ -0.91
MSH6-214ENST00000616033 NTM-AS1Q6ZSK4 140 aa9.4□□□□□ -0.91
MSH6-214ENST00000616033 NOP10Q9NPE3 64 aaKnown RBP9.4□□□□□ -0.91
MSH6-214ENST00000616033 TIMM17BO60830 172 aa9.39□□□□□ -0.91
MSH6-214ENST00000616033 PRR3P79522 188 aaKnown RBP9.39□□□□□ -0.91
MSH6-214ENST00000616033 APCP25054 2843 aa9.39□□□□□ -0.91
MSH6-214ENST00000616033 IMUPQ9GZP8 106 aa9.39□□□□□ -0.91
MSH6-214ENST00000616033 C22orf24Q9Y442 160 aa9.39□□□□□ -0.91
MSH6-214ENST00000616033 SERP2Q8N6R1 65 aa9.38□□□□□ -0.91
MSH6-214ENST00000616033 TMEM258P61165 79 aa9.38□□□□□ -0.91
MSH6-214ENST00000616033 SETXQ7Z333 2677 aaKnown RBP9.38□□□□□ -0.91
MSH6-214ENST00000616033 INSP01308 110 aa9.38□□□□□ -0.91
MSH6-214ENST00000616033 RBM3P98179 157 aaKnown RBP9.38□□□□□ -0.91
MSH6-214ENST00000616033 SEC61GP60059 68 aa9.37□□□□□ -0.91
MSH6-214ENST00000616033 STHQ8IWL8 128 aa9.37□□□□□ -0.91
MSH6-214ENST00000616033 FASNP49327 2511 aaKnown RBP9.37□□□□□ -0.91
MSH6-214ENST00000616033 A0A096LPF7 62 aa9.37□□□□□ -0.91
MSH6-214ENST00000616033 PRB2P02812 416 aaPredicted RBP9.37□□□□□ -0.91
MSH6-214ENST00000616033 MAP6D1Q9H9H5 199 aa9.37□□□□□ -0.91
MSH6-214ENST00000616033 WIPF1O43516 503 aa9.37□□□□□ -0.91
MSH6-214ENST00000616033 CXCL5P42830 114 aa9.37□□□□□ -0.91
MSH6-214ENST00000616033 KRTAP10-9P60411 292 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms