RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 CCL25O15444 150 aa5.36□□□□□ -1.55
PCDH9-205ENST00000614931 ZNF22P17026 224 aaPredicted RBP5.36□□□□□ -1.55
PCDH9-205ENST00000614931 JOSD1Q15040 202 aaPredicted RBP5.36□□□□□ -1.55
PCDH9-205ENST00000614931 CHCHD10Q8WYQ3 142 aaPredicted RBP5.36□□□□□ -1.55
PCDH9-205ENST00000614931 CHAC1Q9BUX1 264 aa5.36□□□□□ -1.55
PCDH9-205ENST00000614931 FRAS1Q86XX4 4008 aa5.36□□□□□ -1.55
PCDH9-205ENST00000614931 IGLV5-45A0A087WSX0 123 aa5.35□□□□□ -1.55
PCDH9-205ENST00000614931 DPM2O94777 84 aa5.35□□□□□ -1.55
PCDH9-205ENST00000614931 SCGB1D1O95968 90 aa5.35□□□□□ -1.55
PCDH9-205ENST00000614931 CRPP02741 224 aa5.35□□□□□ -1.55
PCDH9-205ENST00000614931 FOXI1Q12951 378 aa5.35□□□□□ -1.55
PCDH9-205ENST00000614931 MAJINQ3KP22 176 aa5.35□□□□□ -1.55
PCDH9-205ENST00000614931 C1orf134Q5TEV5 83 aa5.35□□□□□ -1.55
PCDH9-205ENST00000614931 C10orf126Q8N4M7 172 aa5.35□□□□□ -1.55
PCDH9-205ENST00000614931 CDKN2A-AS1Q9UH64 79 aa5.35□□□□□ -1.55
PCDH9-205ENST00000614931 IGHV3OR16-9A0A0B4J2B5 98 aa5.34□□□□□ -1.55
PCDH9-205ENST00000614931 hDV102S1A0JD36 115 aa5.34□□□□□ -1.55
PCDH9-205ENST00000614931 GAGE12HA6NDE8 117 aa5.34□□□□□ -1.55
PCDH9-205ENST00000614931 IGKCP01834 107 aa5.34□□□□□ -1.55
PCDH9-205ENST00000614931 XCL1P47992 114 aa5.34□□□□□ -1.55
PCDH9-205ENST00000614931 SS18Q15532 418 aa5.34□□□□□ -1.55
PCDH9-205ENST00000614931 MIAQ16674 131 aa5.34□□□□□ -1.55
PCDH9-205ENST00000614931 C5orf38Q86SI9 138 aa5.34□□□□□ -1.55
PCDH9-205ENST00000614931 DNAH10Q8IVF4 4471 aa5.33□□□□□ -1.56
PCDH9-205ENST00000614931 IGKV2D-24A0A075B6R9 120 aa5.33□□□□□ -1.56
PCDH9-205ENST00000614931 C20orf202A1L168 122 aa5.33□□□□□ -1.56
PCDH9-205ENST00000614931 SPINK8P0C7L1 97 aa5.33□□□□□ -1.56
PCDH9-205ENST00000614931 PLNP26678 52 aa5.33□□□□□ -1.56
PCDH9-205ENST00000614931 ANKRD39Q53RE8 183 aa5.33□□□□□ -1.56
PCDH9-205ENST00000614931 TTC32Q5I0X7 151 aa5.33□□□□□ -1.56
PCDH9-205ENST00000614931 CD164L2Q6UWJ8 174 aa5.33□□□□□ -1.56
PCDH9-205ENST00000614931 Q6ZRN7 208 aaPredicted RBP5.33□□□□□ -1.56
PCDH9-205ENST00000614931 LINC00469Q8N7U9 141 aa5.33□□□□□ -1.56
PCDH9-205ENST00000614931 STPG4Q8N801 248 aa5.33□□□□□ -1.56
PCDH9-205ENST00000614931 MAPKAPK5-AS1Q8N8E1 139 aa5.33□□□□□ -1.56
PCDH9-205ENST00000614931 C1orf43Q9BWL3 253 aa5.33□□□□□ -1.56
PCDH9-205ENST00000614931 GEMIN7Q9H840 131 aaKnown RBP5.33□□□□□ -1.56
PCDH9-205ENST00000614931 IGHV3-64A0A075B6Q5 118 aa5.32□□□□□ -1.56
PCDH9-205ENST00000614931 TRAV9-2A0A087WT02 112 aa5.32□□□□□ -1.56
PCDH9-205ENST00000614931 IGKV2D-26A0A0A0MRZ7 120 aa5.32□□□□□ -1.56
PCDH9-205ENST00000614931 TRAV8-3A0A0A6YYJ7 113 aa5.32□□□□□ -1.56
PCDH9-205ENST00000614931 TRAV8-4A0A0B4J246 113 aa5.32□□□□□ -1.56
PCDH9-205ENST00000614931 TMEM223A0PJW6 202 aa5.32□□□□□ -1.56
PCDH9-205ENST00000614931 SMIM1B2RUZ4 78 aa5.32□□□□□ -1.56
PCDH9-205ENST00000614931 K7EP13 123 aa5.32□□□□□ -1.56
PCDH9-205ENST00000614931 TSPEAR-AS2P59090 65 aa5.32□□□□□ -1.56
PCDH9-205ENST00000614931 HERVK_113P63121 156 aa5.32□□□□□ -1.56
PCDH9-205ENST00000614931 WFDC2Q14508 124 aa5.32□□□□□ -1.56
PCDH9-205ENST00000614931 TMEM170BQ5T4T1 132 aa5.32□□□□□ -1.56
PCDH9-205ENST00000614931 C6orf223Q8N319 242 aa5.32□□□□□ -1.56
PCDH9-205ENST00000614931 A0A087WZ39 114 aa5.31□□□□□ -1.56
PCDH9-205ENST00000614931 SEC11AP67812 179 aa5.31□□□□□ -1.56
PCDH9-205ENST00000614931 TNP2Q05952 138 aa5.31□□□□□ -1.56
PCDH9-205ENST00000614931 C15orf56Q8N910 161 aa5.31□□□□□ -1.56
PCDH9-205ENST00000614931 DNAH2Q9P225 4427 aa5.31□□□□□ -1.56
PCDH9-205ENST00000614931 IGLV5-39A0A0G2JS06 123 aa5.3□□□□□ -1.56
PCDH9-205ENST00000614931 COX7A2LO14548 114 aa5.3□□□□□ -1.56
PCDH9-205ENST00000614931 SMIM6P0DI80 62 aa5.3□□□□□ -1.56
PCDH9-205ENST00000614931 TTTY13Q9BZ97 58 aa5.3□□□□□ -1.56
PCDH9-205ENST00000614931 TP73-AS1Q9UF72 201 aa5.3□□□□□ -1.56
PCDH9-205ENST00000614931 E9PLD3 99 aa5.29□□□□□ -1.56
PCDH9-205ENST00000614931 H3BRM9 83 aa5.29□□□□□ -1.56
PCDH9-205ENST00000614931 KIAA0087Q14695 138 aa5.29□□□□□ -1.56
PCDH9-205ENST00000614931 LINC01561Q8N1V8 128 aa5.29□□□□□ -1.56
PCDH9-205ENST00000614931 RMI2Q96E14 147 aa5.29□□□□□ -1.56
PCDH9-205ENST00000614931 LINC00526Q96FQ7 95 aa5.29□□□□□ -1.56
PCDH9-205ENST00000614931 KRTAP17-1Q9BYP8 105 aa5.29□□□□□ -1.56
PCDH9-205ENST00000614931 PAM16Q9Y3D7 125 aa5.29□□□□□ -1.56
PCDH9-205ENST00000614931 DNAH17Q9UFH2 4485 aa5.29□□□□□ -1.56
PCDH9-205ENST00000614931 IGHV1-58A0A0C4DH39 117 aa5.28□□□□□ -1.56
PCDH9-205ENST00000614931 LRCOL1A6NCL2 159 aa5.28□□□□□ -1.56
PCDH9-205ENST00000614931 USP17L23D6RBM5 183 aa5.28□□□□□ -1.56
PCDH9-205ENST00000614931 LECT2O14960 151 aa5.28□□□□□ -1.56
PCDH9-205ENST00000614931 HIGD2BQ4VC39 106 aa5.28□□□□□ -1.56
PCDH9-205ENST00000614931 SPATA45Q537H7 98 aa5.28□□□□□ -1.56
PCDH9-205ENST00000614931 LINC00518Q8N0U6 118 aa5.28□□□□□ -1.56
PCDH9-205ENST00000614931 ORAOV1Q8WV07 137 aa5.28□□□□□ -1.56
PCDH9-205ENST00000614931 VAMP8Q9BV40 100 aa5.28□□□□□ -1.56
PCDH9-205ENST00000614931 HECTD4Q9Y4D8 3996 aa5.28□□□□□ -1.56
PCDH9-205ENST00000614931 LEPROTO15243 131 aa5.27□□□□□ -1.57
PCDH9-205ENST00000614931 MALP21145 153 aa5.27□□□□□ -1.57
PCDH9-205ENST00000614931 PCP2Q8IVA1 136 aa5.27□□□□□ -1.57
PCDH9-205ENST00000614931 C12orf57Q99622 126 aa5.27□□□□□ -1.57
PCDH9-205ENST00000614931 TM2D2Q9BX73 214 aa5.27□□□□□ -1.57
PCDH9-205ENST00000614931 HERC2O95714 4834 aa5.27□□□□□ -1.57
PCDH9-205ENST00000614931 KIAA1109Q2LD37 5005 aa5.26□□□□□ -1.57
PCDH9-205ENST00000614931 J3QQQ9 107 aa5.26□□□□□ -1.57
PCDH9-205ENST00000614931 NMUP48645 174 aa5.26□□□□□ -1.57
PCDH9-205ENST00000614931 HERVK_113P61574 105 aa5.26□□□□□ -1.57
PCDH9-205ENST00000614931 SPAG11BQ08648 103 aa5.26□□□□□ -1.57
PCDH9-205ENST00000614931 C2orf82Q6UX34 121 aa5.26□□□□□ -1.57
PCDH9-205ENST00000614931 COX7B2Q8TF08 81 aa5.26□□□□□ -1.57
PCDH9-205ENST00000614931 TOMM7Q9P0U1 55 aa5.26□□□□□ -1.57
PCDH9-205ENST00000614931 FAT2Q9NYQ8 4349 aa5.26□□□□□ -1.57
PCDH9-205ENST00000614931 GVQW2A0A096LPI5 108 aaPredicted RBP5.25□□□□□ -1.57
PCDH9-205ENST00000614931 C16orf90A8MZG2 172 aa5.25□□□□□ -1.57
PCDH9-205ENST00000614931 HSBP1L1C9JCN9 74 aa5.25□□□□□ -1.57
PCDH9-205ENST00000614931 PSCAO43653 123 aa5.25□□□□□ -1.57
PCDH9-205ENST00000614931 SLPIP03973 132 aa5.25□□□□□ -1.57
PCDH9-205ENST00000614931 C10orf25Q5T742 122 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms