RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 IGHV3OR16-9A0A0B4J2B5 98 aa10.78□□□□□ -0.68
IRF1-211ENST00000613424 CDK2AP2O75956 126 aa10.78□□□□□ -0.68
IRF1-211ENST00000613424 MALP21145 153 aa10.78□□□□□ -0.68
IRF1-211ENST00000613424 UBE2D1P51668 147 aa10.78□□□□□ -0.68
IRF1-211ENST00000613424 PMCHL1Q16048 86 aa10.78□□□□□ -0.68
IRF1-211ENST00000613424 LINC00242Q5T6M2 205 aa10.78□□□□□ -0.68
IRF1-211ENST00000613424 GVQW2A0A096LPI5 108 aaPredicted RBP10.77□□□□□ -0.69
IRF1-211ENST00000613424 CNBPP62633 177 aaKnown RBP10.77□□□□□ -0.69
IRF1-211ENST00000613424 COX6A2Q02221 97 aa10.77□□□□□ -0.69
IRF1-211ENST00000613424 HERC2O95714 4834 aa10.76□□□□□ -0.69
IRF1-211ENST00000613424 HBDP02042 147 aa10.76□□□□□ -0.69
IRF1-211ENST00000613424 C9orf163Q8N9P6 203 aa10.76□□□□□ -0.69
IRF1-211ENST00000613424 CHCHD1Q96BP2 118 aaKnown RBP10.76□□□□□ -0.69
IRF1-211ENST00000613424 FAM19A3Q7Z5A8 133 aa10.75□□□□□ -0.69
IRF1-211ENST00000613424 BAGE3Q86Y29 109 aa10.75□□□□□ -0.69
IRF1-211ENST00000613424 LINC00526Q96FQ7 95 aa10.75□□□□□ -0.69
IRF1-211ENST00000613424 FAM30AQ9NZY2 134 aa10.75□□□□□ -0.69
IRF1-211ENST00000613424 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.74□□□□□ -0.69
IRF1-211ENST00000613424 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.74□□□□□ -0.69
IRF1-211ENST00000613424 S100A1P23297 94 aa10.74□□□□□ -0.69
IRF1-211ENST00000613424 XGP55808 180 aa10.74□□□□□ -0.69
IRF1-211ENST00000613424 PDZD11Q5EBL8 140 aa10.74□□□□□ -0.69
IRF1-211ENST00000613424 ZNF561-AS1K7EIQ3 104 aa10.73□□□□□ -0.69
IRF1-211ENST00000613424 APOMO95445 188 aa10.73□□□□□ -0.69
IRF1-211ENST00000613424 CST9LQ9H4G1 147 aa10.73□□□□□ -0.69
IRF1-211ENST00000613424 A0A087WZ39 114 aa10.72□□□□□ -0.69
IRF1-211ENST00000613424 ATP6V1G1O75348 118 aa10.72□□□□□ -0.69
IRF1-211ENST00000613424 PMVKQ15126 192 aa10.72□□□□□ -0.69
IRF1-211ENST00000613424 IGLV4-69A0A075B6H9 119 aa10.71□□□□□ -0.69
IRF1-211ENST00000613424 IGHV3-64A0A075B6Q5 118 aa10.71□□□□□ -0.69
IRF1-211ENST00000613424 A0A0J9YXV3 536 aa10.71□□□□□ -0.69
IRF1-211ENST00000613424 SEC11AP67812 179 aa10.71□□□□□ -0.69
IRF1-211ENST00000613424 SDIM1Q6ZPB5 146 aa10.71□□□□□ -0.69
IRF1-211ENST00000613424 Q6ZSA8 131 aa10.71□□□□□ -0.69
IRF1-211ENST00000613424 HSBP1O75506 76 aa10.7□□□□□ -0.7
IRF1-211ENST00000613424 OR10D4PQ8NGN7 298 aa10.7□□□□□ -0.7
IRF1-211ENST00000613424 ORAOV1Q8WV07 137 aa10.7□□□□□ -0.7
IRF1-211ENST00000613424 SERF1AO75920 110 aa10.69□□□□□ -0.7
IRF1-211ENST00000613424 ATP5LO75964 103 aa10.69□□□□□ -0.7
IRF1-211ENST00000613424 LINC00310P59036 64 aa10.69□□□□□ -0.7
IRF1-211ENST00000613424 HERVK_113P63121 156 aa10.69□□□□□ -0.7
IRF1-211ENST00000613424 HAMPP81172 84 aa10.69□□□□□ -0.7
IRF1-211ENST00000613424 LINC01561Q8N1V8 128 aa10.69□□□□□ -0.7
IRF1-211ENST00000613424 FAM19A2Q8N3H0 131 aa10.69□□□□□ -0.7
IRF1-211ENST00000613424 GEMIN7Q9H840 131 aaKnown RBP10.69□□□□□ -0.7
IRF1-211ENST00000613424 TINCRA0A1B0GVN0 87 aa10.68□□□□□ -0.7
IRF1-211ENST00000613424 NDUFA6P56556 154 aa10.68□□□□□ -0.7
IRF1-211ENST00000613424 SPAG11BQ08648 103 aa10.68□□□□□ -0.7
IRF1-211ENST00000613424 SYCNQ0VAF6 134 aa10.68□□□□□ -0.7
IRF1-211ENST00000613424 C2orf48Q96LS8 159 aa10.68□□□□□ -0.7
IRF1-211ENST00000613424 CDKN2A-AS1Q9UH64 79 aa10.68□□□□□ -0.7
IRF1-211ENST00000613424 NUPR1O60356 82 aa10.67□□□□□ -0.7
IRF1-211ENST00000613424 CARD19Q96LW7 228 aa10.67□□□□□ -0.7
IRF1-211ENST00000613424 HIST1H2BKO60814 126 aa10.66□□□□□ -0.7
IRF1-211ENST00000613424 HIST1H2BJP06899 126 aa10.66□□□□□ -0.7
IRF1-211ENST00000613424 HIST1H2BOP23527 126 aa10.66□□□□□ -0.7
IRF1-211ENST00000613424 HIST1H2BBP33778 126 aa10.66□□□□□ -0.7
IRF1-211ENST00000613424 HIST1H2BDP58876 126 aa10.66□□□□□ -0.7
IRF1-211ENST00000613424 HIST1H2BCP62807 126 aa10.66□□□□□ -0.7
IRF1-211ENST00000613424 HIST2H2BEQ16778 126 aa10.66□□□□□ -0.7
IRF1-211ENST00000613424 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.66□□□□□ -0.7
IRF1-211ENST00000613424 Q6ZRU5 148 aa10.66□□□□□ -0.7
IRF1-211ENST00000613424 HIST1H2BHQ93079 126 aa10.66□□□□□ -0.7
IRF1-211ENST00000613424 CAMK2N2Q96S95 79 aa10.66□□□□□ -0.7
IRF1-211ENST00000613424 HIST1H2BNQ99877 126 aa10.66□□□□□ -0.7
IRF1-211ENST00000613424 HIST1H2BMQ99879 126 aa10.66□□□□□ -0.7
IRF1-211ENST00000613424 KRTAP17-1Q9BYP8 105 aa10.66□□□□□ -0.7
IRF1-211ENST00000613424 KIAA0087Q14695 138 aa10.65□□□□□ -0.7
IRF1-211ENST00000613424 LINC00469Q8N7U9 141 aa10.64□□□□□ -0.71
IRF1-211ENST00000613424 IFI27L1Q96BM0 104 aa10.64□□□□□ -0.71
IRF1-211ENST00000613424 CHAC1Q9BUX1 264 aa10.64□□□□□ -0.71
IRF1-211ENST00000613424 FAT1Q14517 4588 aa10.64□□□□□ -0.71
IRF1-211ENST00000613424 IGLV5-45A0A087WSX0 123 aa10.63□□□□□ -0.71
IRF1-211ENST00000613424 F8WDY8 70 aa10.63□□□□□ -0.71
IRF1-211ENST00000613424 PANO1I0J062 215 aa10.63□□□□□ -0.71
IRF1-211ENST00000613424 IGLC3P0DOY3 106 aa10.63□□□□□ -0.71
IRF1-211ENST00000613424 SCXQ7RTU7 201 aa10.63□□□□□ -0.71
IRF1-211ENST00000613424 PACRGQ96M98 296 aaPredicted RBP10.63□□□□□ -0.71
IRF1-211ENST00000613424 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.63□□□□□ -0.71
IRF1-211ENST00000613424 CIRBP-AS1Q8TBR5 109 aa10.62□□□□□ -0.71
IRF1-211ENST00000613424 NDUFA1O15239 70 aa10.61□□□□□ -0.71
IRF1-211ENST00000613424 LEPROTL1O95214 131 aa10.61□□□□□ -0.71
IRF1-211ENST00000613424 SMR3BP02814 79 aaPredicted RBP10.61□□□□□ -0.71
IRF1-211ENST00000613424 C10orf25Q5T742 122 aa10.61□□□□□ -0.71
IRF1-211ENST00000613424 UNQ6190/PRO20217Q6UXQ8 127 aa10.61□□□□□ -0.71
IRF1-211ENST00000613424 TOMM7Q9P0U1 55 aa10.61□□□□□ -0.71
IRF1-211ENST00000613424 TRAV12-1A0A0B4J245 112 aa10.6□□□□□ -0.71
IRF1-211ENST00000613424 CHTF8P0CG12 524 aa10.6□□□□□ -0.71
IRF1-211ENST00000613424 CIRBPQ14011 172 aaKnown RBP10.6□□□□□ -0.71
IRF1-211ENST00000613424 RNF151Q2KHN1 245 aa10.6□□□□□ -0.71
IRF1-211ENST00000613424 Q8N1X5 172 aa10.6□□□□□ -0.71
IRF1-211ENST00000613424 MRPL35Q9NZE8 188 aaKnown RBP10.6□□□□□ -0.71
IRF1-211ENST00000613424 SMIM1B2RUZ4 78 aa10.59□□□□□ -0.71
IRF1-211ENST00000613424 PRSS2P07478 247 aa10.59□□□□□ -0.71
IRF1-211ENST00000613424 C6orf226Q5I0X4 101 aa10.59□□□□□ -0.71
IRF1-211ENST00000613424 Q8IZM0 81 aa10.59□□□□□ -0.71
IRF1-211ENST00000613424 DPH3Q96FX2 82 aa10.59□□□□□ -0.71
IRF1-211ENST00000613424 CHTOPQ9Y3Y2 248 aaKnown RBP10.59□□□□□ -0.71
IRF1-211ENST00000613424 A0A096LNI7 61 aa10.58□□□□□ -0.72
IRF1-211ENST00000613424 IGKV2-24A0A0C4DH68 120 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms