RNA–Protein interactions for RNA: ENST00000612828.4

CNTNAP3B-211, Transcript of contactin associated protein like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 7,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-211ENST00000612828 SPRNQ5BIV9 151 aa8.14□□□□□ -1.11
CNTNAP3B-211ENST00000612828 A0A0D9SG42 100 aa8.13□□□□□ -1.11
CNTNAP3B-211ENST00000612828 SPATA3Q8NHX4 192 aa8.13□□□□□ -1.11
CNTNAP3B-211ENST00000612828 Q9BRP9 147 aa8.13□□□□□ -1.11
CNTNAP3B-211ENST00000612828 TRBV6-1A0A0K0K1D8 114 aa8.13□□□□□ -1.11
CNTNAP3B-211ENST00000612828 PROK1P58294 105 aa8.12□□□□□ -1.11
CNTNAP3B-211ENST00000612828 DAZAP2Q15038 168 aaPredicted RBP8.12□□□□□ -1.11
CNTNAP3B-211ENST00000612828 TRBV7-7A0A0K0K1E9 115 aa8.12□□□□□ -1.11
CNTNAP3B-211ENST00000612828 MGAMO43451 1857 aa8.12□□□□□ -1.11
CNTNAP3B-211ENST00000612828 KPRPQ5T749 579 aaPredicted RBP8.12□□□□□ -1.11
CNTNAP3B-211ENST00000612828 Q6ZPA2 131 aa8.12□□□□□ -1.11
CNTNAP3B-211ENST00000612828 NDUFA4L2Q9NRX3 87 aa8.12□□□□□ -1.11
CNTNAP3B-211ENST00000612828 UQCRQO14949 82 aa8.12□□□□□ -1.11
CNTNAP3B-211ENST00000612828 TRBV6-5A0A0K0K1A5 114 aa8.12□□□□□ -1.11
CNTNAP3B-211ENST00000612828 FAM19A4Q96LR4 140 aa8.12□□□□□ -1.11
CNTNAP3B-211ENST00000612828 PTPRSQ13332 1948 aa8.11□□□□□ -1.11
CNTNAP3B-211ENST00000612828 LINC00173Q6ZV60 143 aa8.11□□□□□ -1.11
CNTNAP3B-211ENST00000612828 LIMD2Q9BT23 127 aa8.11□□□□□ -1.11
CNTNAP3B-211ENST00000612828 H3BRN7 92 aa8.11□□□□□ -1.11
CNTNAP3B-211ENST00000612828 LINC01548A6NM66 108 aa8.1□□□□□ -1.11
CNTNAP3B-211ENST00000612828 WISP2O76076 250 aa8.1□□□□□ -1.11
CNTNAP3B-211ENST00000612828 LINC00643Q86TS7 51 aa8.1□□□□□ -1.11
CNTNAP3B-211ENST00000612828 CCDC140Q96MF4 163 aa8.1□□□□□ -1.11
CNTNAP3B-211ENST00000612828 NCOR1P1Q9H4R4 102 aa8.1□□□□□ -1.11
CNTNAP3B-211ENST00000612828 DHRS4-AS1Q9P1J3 65 aa8.1□□□□□ -1.11
CNTNAP3B-211ENST00000612828 IGLC1P0CG04 106 aa8.1□□□□□ -1.11
CNTNAP3B-211ENST00000612828 C4orf3Q8WVX3 66 aa8.1□□□□□ -1.11
CNTNAP3B-211ENST00000612828 LINC00308Q8TCZ7 52 aa8.09□□□□□ -1.11
CNTNAP3B-211ENST00000612828 ALPK3Q96L96 1907 aa8.09□□□□□ -1.11
CNTNAP3B-211ENST00000612828 C8orf87E5RJ46 101 aa8.08□□□□□ -1.12
CNTNAP3B-211ENST00000612828 LINC00694P0DN24 101 aa8.08□□□□□ -1.12
CNTNAP3B-211ENST00000612828 CRIP3Q6Q6R5 217 aa8.08□□□□□ -1.12
CNTNAP3B-211ENST00000612828 GOLGB1Q14789 3259 aaKnown RBP8.08□□□□□ -1.12
CNTNAP3B-211ENST00000612828 Q6ZTI0 123 aa8.08□□□□□ -1.12
CNTNAP3B-211ENST00000612828 A0A087WVE0 104 aa8.08□□□□□ -1.12
CNTNAP3B-211ENST00000612828 IGLV6-57P01721 117 aa8.08□□□□□ -1.12
CNTNAP3B-211ENST00000612828 C19orf84I3L1E1 186 aa8.07□□□□□ -1.12
CNTNAP3B-211ENST00000612828 TP53TG3Q9ULZ0 132 aa8.07□□□□□ -1.12
CNTNAP3B-211ENST00000612828 K7ENP7 123 aa8.07□□□□□ -1.12
CNTNAP3B-211ENST00000612828 Q8TCH9 128 aa8.06□□□□□ -1.12
CNTNAP3B-211ENST00000612828 Q96NJ1 140 aa8.06□□□□□ -1.12
CNTNAP3B-211ENST00000612828 GRNP28799 593 aaKnown RBP8.06□□□□□ -1.12
CNTNAP3B-211ENST00000612828 C11orf1Q9H5F2 150 aa8.06□□□□□ -1.12
CNTNAP3B-211ENST00000612828 MYCNOSP40205 109 aa8.06□□□□□ -1.12
CNTNAP3B-211ENST00000612828 TTTY13Q9BZ97 58 aa8.06□□□□□ -1.12
CNTNAP3B-211ENST00000612828 HIVEP2P31629 2446 aa8.06□□□□□ -1.12
CNTNAP3B-211ENST00000612828 RNASE8Q8TDE3 154 aaKnown RBP8.06□□□□□ -1.12
CNTNAP3B-211ENST00000612828 EP400Q96L91 3159 aa8.06□□□□□ -1.12
CNTNAP3B-211ENST00000612828 Q8N814 137 aa8.05□□□□□ -1.12
CNTNAP3B-211ENST00000612828 LINC00467Q9BRT7 94 aa8.05□□□□□ -1.12
CNTNAP3B-211ENST00000612828 FAM215AQ9Y5M1 114 aa8.05□□□□□ -1.12
CNTNAP3B-211ENST00000612828 FXYD2P54710 66 aa8.05□□□□□ -1.12
CNTNAP3B-211ENST00000612828 ZNF295-AS1Q8N0V1 137 aa8.05□□□□□ -1.12
CNTNAP3B-211ENST00000612828 ZNF702PQ9H963 129 aa8.05□□□□□ -1.12
CNTNAP3B-211ENST00000612828 TP73-AS1Q9UF72 201 aa8.05□□□□□ -1.12
CNTNAP3B-211ENST00000612828 C16orf90A8MZG2 172 aa8.05□□□□□ -1.12
CNTNAP3B-211ENST00000612828 BBC3Q96PG8 261 aaPredicted RBP8.05□□□□□ -1.12
CNTNAP3B-211ENST00000612828 CHTF8P0CG12 524 aa8.04□□□□□ -1.12
CNTNAP3B-211ENST00000612828 LINC00483Q53H64 154 aa8.04□□□□□ -1.12
CNTNAP3B-211ENST00000612828 LINC01545Q5VT33 79 aa8.04□□□□□ -1.12
CNTNAP3B-211ENST00000612828 MIAQ16674 131 aa8.04□□□□□ -1.12
CNTNAP3B-211ENST00000612828 MSRB1Q9NZV6 116 aa8.04□□□□□ -1.12
CNTNAP3B-211ENST00000612828 IGLV1-44P01699 117 aa8.03□□□□□ -1.12
CNTNAP3B-211ENST00000612828 C19orf71A6NCJ1 209 aa8.03□□□□□ -1.12
CNTNAP3B-211ENST00000612828 CDIP1Q9H305 208 aa8.03□□□□□ -1.12
CNTNAP3B-211ENST00000612828 KRTAP27-1Q3LI81 207 aa8.03□□□□□ -1.12
CNTNAP3B-211ENST00000612828 RITA1Q96K30 269 aa8.03□□□□□ -1.12
CNTNAP3B-211ENST00000612828 KIAA1549LQ6ZVL6 1849 aa8.03□□□□□ -1.12
CNTNAP3B-211ENST00000612828 IGLV11-55A0A075B6I3 123 aa8.03□□□□□ -1.12
CNTNAP3B-211ENST00000612828 C6orf48Q9UBA6 75 aa8.03□□□□□ -1.12
CNTNAP3B-211ENST00000612828 TYMSOSQ8TAI1 123 aa8.02□□□□□ -1.12
CNTNAP3B-211ENST00000612828 BRWD1-AS2P59051 145 aa8.02□□□□□ -1.13
CNTNAP3B-211ENST00000612828 EDN2P20800 178 aa8.02□□□□□ -1.13
CNTNAP3B-211ENST00000612828 BRI3O95415 125 aa8.01□□□□□ -1.13
CNTNAP3B-211ENST00000612828 MOBPQ13875 183 aa8.01□□□□□ -1.13
CNTNAP3B-211ENST00000612828 ZNF747Q9BV97 191 aa8.01□□□□□ -1.13
CNTNAP3B-211ENST00000612828 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.01□□□□□ -1.13
CNTNAP3B-211ENST00000612828 C11orf86A6NJI1 115 aa8.01□□□□□ -1.13
CNTNAP3B-211ENST00000612828 E7EUB6 86 aa8.01□□□□□ -1.13
CNTNAP3B-211ENST00000612828 C1orf64Q8NEQ6 169 aa8.01□□□□□ -1.13
CNTNAP3B-211ENST00000612828 MRPS36P82909 103 aaKnown RBP8□□□□□ -1.13
CNTNAP3B-211ENST00000612828 YPEL4Q96NS1 127 aa8□□□□□ -1.13
CNTNAP3B-211ENST00000612828 A0A087WSZ3 146 aa7.99□□□□□ -1.13
CNTNAP3B-211ENST00000612828 A0A1W2PNU3 283 aaPredicted RBP7.99□□□□□ -1.13
CNTNAP3B-211ENST00000612828 NDUFA7O95182 113 aa7.98□□□□□ -1.13
CNTNAP3B-211ENST00000612828 U3KQK5 164 aa7.98□□□□□ -1.13
CNTNAP3B-211ENST00000612828 TOMM6Q96B49 74 aa7.98□□□□□ -1.13
CNTNAP3B-211ENST00000612828 NOTCH2Q04721 2471 aa7.98□□□□□ -1.13
CNTNAP3B-211ENST00000612828 LYPD5Q6UWN5 251 aa7.98□□□□□ -1.13
CNTNAP3B-211ENST00000612828 Q6ZTC4 211 aa7.98□□□□□ -1.13
CNTNAP3B-211ENST00000612828 FAM167A-AS1Q96KT0 104 aa7.98□□□□□ -1.13
CNTNAP3B-211ENST00000612828 LY6G6DO95868 133 aa7.97□□□□□ -1.13
CNTNAP3B-211ENST00000612828 TRAV22A0A0B4J277 110 aa7.97□□□□□ -1.13
CNTNAP3B-211ENST00000612828 TLX1NBP0CAT3 122 aa7.97□□□□□ -1.13
CNTNAP3B-211ENST00000612828 LINC00313P59037 77 aa7.97□□□□□ -1.13
CNTNAP3B-211ENST00000612828 C9orf116Q5BN46 136 aaPredicted RBP7.97□□□□□ -1.13
CNTNAP3B-211ENST00000612828 COX6A2Q02221 97 aa7.97□□□□□ -1.13
CNTNAP3B-211ENST00000612828 C1orf229Q6ZS94 237 aaPredicted RBP7.97□□□□□ -1.13
CNTNAP3B-211ENST00000612828 CCDC179H3BU77 68 aa7.96□□□□□ -1.14
CNTNAP3B-211ENST00000612828 SMIM11BQ8TCY0 68 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms