RNA–Protein interactions for RNA: ENST00000612155.1

SRRM3-205, Transcript of serine/arginine repetitive matrix 3, humanhuman

TSL 1 (best)

Gene SRRM3, Length 2,150 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3-205ENST00000612155 TRGV4A0A0C4DH28 118 aa13.68□□□□□ -0.22
SRRM3-205ENST00000612155 LYRM9A8MSI8 78 aa13.68□□□□□ -0.22
SRRM3-205ENST00000612155 HTN3P15516 51 aa13.68□□□□□ -0.22
SRRM3-205ENST00000612155 Q6ZTC4 211 aa13.68□□□□□ -0.22
SRRM3-205ENST00000612155 C11orf45Q8TAV5 145 aa13.68□□□□□ -0.22
SRRM3-205ENST00000612155 CSMD3Q7Z407 3707 aa13.68□□□□□ -0.22
SRRM3-205ENST00000612155 COX6A2Q02221 97 aa13.68□□□□□ -0.22
SRRM3-205ENST00000612155 C10orf126Q8N4M7 172 aa13.68□□□□□ -0.22
SRRM3-205ENST00000612155 DNAH7Q8WXX0 4024 aa13.67□□□□□ -0.22
SRRM3-205ENST00000612155 SRSF9Q13242 221 aaKnown RBP eCLIP13.66□□□□□ -0.22
SRRM3-205ENST00000612155 SPANXB1Q9NS25 103 aaPredicted RBP13.66□□□□□ -0.22
SRRM3-205ENST00000612155 GAGE10A6NGK3 116 aa13.66□□□□□ -0.22
SRRM3-205ENST00000612155 IGLL5B9A064 214 aa13.66□□□□□ -0.22
SRRM3-205ENST00000612155 IGHV3-30P01768 117 aa13.66□□□□□ -0.22
SRRM3-205ENST00000612155 SPINK8P0C7L1 97 aa13.66□□□□□ -0.22
SRRM3-205ENST00000612155 IGHV3-30-5P0DP03 117 aa13.66□□□□□ -0.22
SRRM3-205ENST00000612155 K7EP34 96 aa13.65□□□□□ -0.22
SRRM3-205ENST00000612155 DGAT2L7PQ6IED9 249 aa13.65□□□□□ -0.22
SRRM3-205ENST00000612155 GTSF1LQ9H1H1 148 aa13.65□□□□□ -0.22
SRRM3-205ENST00000612155 IGHV1-58A0A0C4DH39 117 aa13.65□□□□□ -0.22
SRRM3-205ENST00000612155 CDKN2A-AS1Q9UH64 79 aa13.65□□□□□ -0.22
SRRM3-205ENST00000612155 CSDC2Q9Y534 153 aaKnown RBP13.64□□□□□ -0.23
SRRM3-205ENST00000612155 IGLV5-45A0A087WSX0 123 aa13.64□□□□□ -0.23
SRRM3-205ENST00000612155 LINC00242Q5T6M2 205 aa13.64□□□□□ -0.23
SRRM3-205ENST00000612155 VSIG2Q96IQ7 327 aa13.64□□□□□ -0.23
SRRM3-205ENST00000612155 CDC42SE2Q9NRR3 84 aa13.64□□□□□ -0.23
SRRM3-205ENST00000612155 TIRAPP58753 221 aa13.63□□□□□ -0.23
SRRM3-205ENST00000612155 PGPEP1Q9NXJ5 209 aa13.62□□□□□ -0.23
SRRM3-205ENST00000612155 A0A0J9YXY3 114 aa13.62□□□□□ -0.23
SRRM3-205ENST00000612155 TMEM243Q9BU79 118 aa13.62□□□□□ -0.23
SRRM3-205ENST00000612155 GEMIN7Q9H840 131 aaKnown RBP13.62□□□□□ -0.23
SRRM3-205ENST00000612155 SPCS1Q9Y6A9 102 aa13.62□□□□□ -0.23
SRRM3-205ENST00000612155 FABP2P12104 132 aa13.61□□□□□ -0.23
SRRM3-205ENST00000612155 F5H768 121 aa13.6□□□□□ -0.23
SRRM3-205ENST00000612155 FAM19A3Q7Z5A8 133 aa13.6□□□□□ -0.23
SRRM3-205ENST00000612155 LITAFQ99732 161 aa13.6□□□□□ -0.23
SRRM3-205ENST00000612155 EIF4EBP3O60516 100 aaPredicted RBP13.59□□□□□ -0.23
SRRM3-205ENST00000612155 STARD9Q9P2P6 4700 aa13.59□□□□□ -0.23
SRRM3-205ENST00000612155 TRAV26-1A0A087WT03 109 aa13.59□□□□□ -0.23
SRRM3-205ENST00000612155 TRAV13-1A0A0B4J241 112 aa13.59□□□□□ -0.23
SRRM3-205ENST00000612155 ATP5G1P05496 136 aa13.59□□□□□ -0.23
SRRM3-205ENST00000612155 GTF2H5Q6ZYL4 71 aa13.59□□□□□ -0.23
SRRM3-205ENST00000612155 TMEM101Q96IK0 257 aa13.59□□□□□ -0.23
SRRM3-205ENST00000612155 TEX48A0A1B0GUV7 120 aa13.58□□□□□ -0.24
SRRM3-205ENST00000612155 GAGE6Q13070 117 aa13.58□□□□□ -0.24
SRRM3-205ENST00000612155 NDUFA12Q9UI09 145 aa13.58□□□□□ -0.24
SRRM3-205ENST00000612155 TRBV6-8A0A0A6YYG3 113 aa13.57□□□□□ -0.24
SRRM3-205ENST00000612155 CFC1BP0CG36 223 aa13.57□□□□□ -0.24
SRRM3-205ENST00000612155 CFC1P0CG37 223 aa13.57□□□□□ -0.24
SRRM3-205ENST00000612155 DEFB131BA0A096LNP1 70 aa13.56□□□□□ -0.24
SRRM3-205ENST00000612155 ADAMTSL4-AS1Q5T5F5 129 aa13.56□□□□□ -0.24
SRRM3-205ENST00000612155 UBE2L6O14933 153 aa13.56□□□□□ -0.24
SRRM3-205ENST00000612155 APOMO95445 188 aa13.56□□□□□ -0.24
SRRM3-205ENST00000612155 LYSTQ99698 3801 aa13.56□□□□□ -0.24
SRRM3-205ENST00000612155 IGLV4-60A0A075B6I1 120 aa13.55□□□□□ -0.24
SRRM3-205ENST00000612155 IGLV5-39A0A0G2JS06 123 aa13.55□□□□□ -0.24
SRRM3-205ENST00000612155 GYPEP15421 78 aa13.55□□□□□ -0.24
SRRM3-205ENST00000612155 ZFAND6Q6FIF0 208 aa13.55□□□□□ -0.24
SRRM3-205ENST00000612155 MUSTN1Q8IVN3 82 aa13.55□□□□□ -0.24
SRRM3-205ENST00000612155 HERVK_113P63121 156 aa13.55□□□□□ -0.24
SRRM3-205ENST00000612155 H7C423 109 aa13.54□□□□□ -0.24
SRRM3-205ENST00000612155 TSPAN13O95857 204 aa13.54□□□□□ -0.24
SRRM3-205ENST00000612155 A4D1N5 150 aa13.53□□□□□ -0.24
SRRM3-205ENST00000612155 SMIM1B2RUZ4 78 aa13.53□□□□□ -0.24
SRRM3-205ENST00000612155 PLECQ15149 4684 aaKnown RBP13.52□□□□□ -0.24
SRRM3-205ENST00000612155 MTURNQ8N3F0 131 aa13.52□□□□□ -0.24
SRRM3-205ENST00000612155 TENM2Q9NT68 2774 aa13.51□□□□□ -0.25
SRRM3-205ENST00000612155 PRO0255Q9UI72 69 aa13.51□□□□□ -0.25
SRRM3-205ENST00000612155 A0A096LPF7 62 aa13.51□□□□□ -0.25
SRRM3-205ENST00000612155 TRAV10A0A0B4J240 114 aa13.51□□□□□ -0.25
SRRM3-205ENST00000612155 ATP6V0E2Q8NHE4 81 aa13.51□□□□□ -0.25
SRRM3-205ENST00000612155 CHCHD5Q9BSY4 110 aa13.51□□□□□ -0.25
SRRM3-205ENST00000612155 SMAGPQ0VAQ4 97 aa13.5□□□□□ -0.25
SRRM3-205ENST00000612155 DYNC2H1Q8NCM8 4307 aaKnown RBP13.5□□□□□ -0.25
SRRM3-205ENST00000612155 NDUFA1O15239 70 aa13.49□□□□□ -0.25
SRRM3-205ENST00000612155 PAX4O43316 350 aa13.49□□□□□ -0.25
SRRM3-205ENST00000612155 CKS1BP61024 79 aa13.49□□□□□ -0.25
SRRM3-205ENST00000612155 SFTA2Q6UW10 78 aa13.49□□□□□ -0.25
SRRM3-205ENST00000612155 SPANXDQ9BXN6 97 aa13.48□□□□□ -0.25
SRRM3-205ENST00000612155 SPANXCQ9NY87 97 aa13.48□□□□□ -0.25
SRRM3-205ENST00000612155 IGKV3OR2-268A0A0C4DH90 116 aa13.47□□□□□ -0.25
SRRM3-205ENST00000612155 H3BMG7 143 aa13.47□□□□□ -0.25
SRRM3-205ENST00000612155 WWC2-AS2Q96NR7 200 aa13.46□□□□□ -0.25
SRRM3-205ENST00000612155 Q9H8V8 135 aa13.46□□□□□ -0.25
SRRM3-205ENST00000612155 PRO1854Q9UHT4 67 aa13.46□□□□□ -0.25
SRRM3-205ENST00000612155 RPL24P83731 157 aaKnown RBP13.45□□□□□ -0.26
SRRM3-205ENST00000612155 MIAQ16674 131 aa13.45□□□□□ -0.26
SRRM3-205ENST00000612155 DAND5Q8N907 189 aa13.45□□□□□ -0.26
SRRM3-205ENST00000612155 PRSS2P07478 247 aa13.45□□□□□ -0.26
SRRM3-205ENST00000612155 NPC2P61916 151 aa13.45□□□□□ -0.26
SRRM3-205ENST00000612155 ZNF625Q96I27 306 aaPredicted RBP13.44□□□□□ -0.26
SRRM3-205ENST00000612155 SIGMAR1Q99720 223 aa13.44□□□□□ -0.26
SRRM3-205ENST00000612155 IGHV3-33P01772 117 aa13.44□□□□□ -0.26
SRRM3-205ENST00000612155 MUC7Q8TAX7 377 aa13.44□□□□□ -0.26
SRRM3-205ENST00000612155 A0A0B4J2C4 111 aa13.43□□□□□ -0.26
SRRM3-205ENST00000612155 TIMM17BO60830 172 aa13.43□□□□□ -0.26
SRRM3-205ENST00000612155 HERV-K104P63124 156 aa13.43□□□□□ -0.26
SRRM3-205ENST00000612155 IGHV3OR16-9A0A0B4J2B5 98 aa13.42□□□□□ -0.26
SRRM3-205ENST00000612155 PRO0461Q9UI25 63 aa13.42□□□□□ -0.26
SRRM3-205ENST00000612155 WFDC2Q14508 124 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms