RNA–Protein interactions for RNA: ENST00000611963.4

TARDBP-213, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-213ENST00000611963 LYSTQ99698 3801 aa5.54□□□□□ -1.52
TARDBP-213ENST00000611963 CHAC1Q9BUX1 264 aa5.54□□□□□ -1.52
TARDBP-213ENST00000611963 PKIAP61925 76 aa5.53□□□□□ -1.52
TARDBP-213ENST00000611963 NFE4Q86UQ8 179 aa5.53□□□□□ -1.52
TARDBP-213ENST00000611963 WFDC10BQ8IUB3 73 aa5.53□□□□□ -1.52
TARDBP-213ENST00000611963 TP73-AS1Q9UF72 201 aa5.53□□□□□ -1.52
TARDBP-213ENST00000611963 IGKV2D-26A0A0A0MRZ7 120 aa5.52□□□□□ -1.53
TARDBP-213ENST00000611963 TRAV8-6A0A0B4J262 113 aa5.52□□□□□ -1.53
TARDBP-213ENST00000611963 IGHV3-30P01768 117 aa5.52□□□□□ -1.53
TARDBP-213ENST00000611963 IGHV3-33P01772 117 aa5.52□□□□□ -1.53
TARDBP-213ENST00000611963 IGHV3-30-3P0DP02 117 aa5.52□□□□□ -1.53
TARDBP-213ENST00000611963 IGHV3-30-5P0DP03 117 aa5.52□□□□□ -1.53
TARDBP-213ENST00000611963 ZNF22P17026 224 aaPredicted RBP5.52□□□□□ -1.53
TARDBP-213ENST00000611963 TMEM170BQ5T4T1 132 aa5.52□□□□□ -1.53
TARDBP-213ENST00000611963 C14orf144Q96I85 54 aa5.52□□□□□ -1.53
TARDBP-213ENST00000611963 HYDINQ4G0P3 5121 aa5.51□□□□□ -1.53
TARDBP-213ENST00000611963 LCE6AA0A183 80 aa5.51□□□□□ -1.53
TARDBP-213ENST00000611963 A0A1B0GUV1 79 aa5.51□□□□□ -1.53
TARDBP-213ENST00000611963 TINCRA0A1B0GVN0 87 aa5.51□□□□□ -1.53
TARDBP-213ENST00000611963 TSTD3H0UI37 97 aa5.51□□□□□ -1.53
TARDBP-213ENST00000611963 ANGP03950 147 aaKnown RBP5.51□□□□□ -1.53
TARDBP-213ENST00000611963 NMUP48645 174 aa5.51□□□□□ -1.53
TARDBP-213ENST00000611963 COX6A2Q02221 97 aa5.51□□□□□ -1.53
TARDBP-213ENST00000611963 LINC00242Q5T6M2 205 aa5.51□□□□□ -1.53
TARDBP-213ENST00000611963 LINC00269Q8N2A0 174 aa5.51□□□□□ -1.53
TARDBP-213ENST00000611963 LINC00469Q8N7U9 141 aa5.51□□□□□ -1.53
TARDBP-213ENST00000611963 GEMIN7Q9H840 131 aaKnown RBP5.51□□□□□ -1.53
TARDBP-213ENST00000611963 ALMS1Q8TCU4 4167 aa5.51□□□□□ -1.53
TARDBP-213ENST00000611963 DNAH6Q9C0G6 4158 aa5.5□□□□□ -1.53
TARDBP-213ENST00000611963 IGHV3-64A0A075B6Q5 118 aa5.5□□□□□ -1.53
TARDBP-213ENST00000611963 PCP2Q8IVA1 136 aa5.5□□□□□ -1.53
TARDBP-213ENST00000611963 TTTY13Q9BZ97 58 aa5.5□□□□□ -1.53
TARDBP-213ENST00000611963 KLK12Q9UKR0 248 aa5.5□□□□□ -1.53
TARDBP-213ENST00000611963 LINC00588Q9Y4M8 146 aa5.5□□□□□ -1.53
TARDBP-213ENST00000611963 DNAH10Q8IVF4 4471 aa5.5□□□□□ -1.53
TARDBP-213ENST00000611963 LINC00959A0A1B0GUT2 108 aa5.49□□□□□ -1.53
TARDBP-213ENST00000611963 TMEM223A0PJW6 202 aa5.49□□□□□ -1.53
TARDBP-213ENST00000611963 SPINK8P0C7L1 97 aa5.49□□□□□ -1.53
TARDBP-213ENST00000611963 COX8AP10176 69 aa5.49□□□□□ -1.53
TARDBP-213ENST00000611963 TSPEAR-AS2P59090 65 aa5.49□□□□□ -1.53
TARDBP-213ENST00000611963 HERVK_113P61574 105 aa5.49□□□□□ -1.53
TARDBP-213ENST00000611963 CDKN2A-AS1Q9UH64 79 aa5.49□□□□□ -1.53
TARDBP-213ENST00000611963 APLNQ9ULZ1 77 aa5.49□□□□□ -1.53
TARDBP-213ENST00000611963 MRPS16Q9Y3D3 137 aaKnown RBP5.49□□□□□ -1.53
TARDBP-213ENST00000611963 IGLV5-45A0A087WSX0 123 aa5.48□□□□□ -1.53
TARDBP-213ENST00000611963 TRAV8-3A0A0A6YYJ7 113 aa5.48□□□□□ -1.53
TARDBP-213ENST00000611963 NUPR2A6NF83 97 aa5.48□□□□□ -1.53
TARDBP-213ENST00000611963 E9PLD3 99 aa5.48□□□□□ -1.53
TARDBP-213ENST00000611963 CCL25O15444 150 aa5.48□□□□□ -1.53
TARDBP-213ENST00000611963 DDTP30046 118 aa5.48□□□□□ -1.53
TARDBP-213ENST00000611963 XCL1P47992 114 aa5.48□□□□□ -1.53
TARDBP-213ENST00000611963 HERVK_113P63121 156 aa5.48□□□□□ -1.53
TARDBP-213ENST00000611963 SLC25A34Q6PIV7 304 aa5.48□□□□□ -1.53
TARDBP-213ENST00000611963 FAM19A3Q7Z5A8 133 aa5.48□□□□□ -1.53
TARDBP-213ENST00000611963 MIEN1Q9BRT3 115 aa5.48□□□□□ -1.53
TARDBP-213ENST00000611963 UQCR10Q9UDW1 63 aa5.48□□□□□ -1.53
TARDBP-213ENST00000611963 IGLV10-54A0A075B6I4 117 aa5.47□□□□□ -1.53
TARDBP-213ENST00000611963 LINC00587B1AMM8 73 aa5.47□□□□□ -1.53
TARDBP-213ENST00000611963 CCL18P55774 89 aa5.47□□□□□ -1.53
TARDBP-213ENST00000611963 SEC11AP67812 179 aa5.47□□□□□ -1.53
TARDBP-213ENST00000611963 REG3AQ06141 175 aa5.47□□□□□ -1.53
TARDBP-213ENST00000611963 SS18Q15532 418 aa5.47□□□□□ -1.53
TARDBP-213ENST00000611963 LINC01556Q5JQF7 62 aa5.47□□□□□ -1.53
TARDBP-213ENST00000611963 C5orf38Q86SI9 138 aa5.47□□□□□ -1.53
TARDBP-213ENST00000611963 MAPKAPK5-AS1Q8N8E1 139 aa5.47□□□□□ -1.53
TARDBP-213ENST00000611963 UBE2WQ96B02 151 aa5.47□□□□□ -1.53
TARDBP-213ENST00000611963 PLA2G2DQ9UNK4 145 aa5.47□□□□□ -1.53
TARDBP-213ENST00000611963 KLK5Q9Y337 293 aaPredicted RBP5.47□□□□□ -1.53
TARDBP-213ENST00000611963 SMIM1B2RUZ4 78 aa5.46□□□□□ -1.54
TARDBP-213ENST00000611963 H3BRM9 83 aa5.46□□□□□ -1.54
TARDBP-213ENST00000611963 LEPROTO15243 131 aa5.46□□□□□ -1.54
TARDBP-213ENST00000611963 SIVA1O15304 175 aa5.46□□□□□ -1.54
TARDBP-213ENST00000611963 HNRNPA3P51991 378 aaKnown RBP5.46□□□□□ -1.54
TARDBP-213ENST00000611963 ENHOQ6UWT2 76 aa5.46□□□□□ -1.54
TARDBP-213ENST00000611963 BOD1L2Q8IYS8 172 aa5.46□□□□□ -1.54
TARDBP-213ENST00000611963 CHCHD10Q8WYQ3 142 aaPredicted RBP5.46□□□□□ -1.54
TARDBP-213ENST00000611963 PLEKHB2Q96CS7 222 aa5.46□□□□□ -1.54
TARDBP-213ENST00000611963 PRR34Q9NV39 138 aa5.46□□□□□ -1.54
TARDBP-213ENST00000611963 EPPK1P58107 5090 aaKnown RBP5.45□□□□□ -1.54
TARDBP-213ENST00000611963 IGHV3OR16-9A0A0B4J2B5 98 aa5.45□□□□□ -1.54
TARDBP-213ENST00000611963 IGHV1-58A0A0C4DH39 117 aa5.45□□□□□ -1.54
TARDBP-213ENST00000611963 ZNF815PA8K554 130 aa5.45□□□□□ -1.54
TARDBP-213ENST00000611963 J3QQQ9 107 aa5.45□□□□□ -1.54
TARDBP-213ENST00000611963 CRPP02741 224 aa5.45□□□□□ -1.54
TARDBP-213ENST00000611963 DNAH10OSP0CZ25 163 aa5.45□□□□□ -1.54
TARDBP-213ENST00000611963 LGALS3P17931 250 aaKnown RBP5.45□□□□□ -1.54
TARDBP-213ENST00000611963 C2orf91Q6ZV80 131 aa5.45□□□□□ -1.54
TARDBP-213ENST00000611963 UBE2DNLQ8IWF7 75 aa5.45□□□□□ -1.54
TARDBP-213ENST00000611963 IGLV5-39A0A0G2JS06 123 aa5.44□□□□□ -1.54
TARDBP-213ENST00000611963 MYMXA0A1B0GTQ4 84 aa5.44□□□□□ -1.54
TARDBP-213ENST00000611963 GAGE12HA6NDE8 117 aa5.44□□□□□ -1.54
TARDBP-213ENST00000611963 DLEU1O43261 78 aa5.44□□□□□ -1.54
TARDBP-213ENST00000611963 CTAG1AP78358 180 aa5.44□□□□□ -1.54
TARDBP-213ENST00000611963 FOXI1Q12951 378 aa5.44□□□□□ -1.54
TARDBP-213ENST00000611963 LCE4AQ5TA78 99 aa5.44□□□□□ -1.54
TARDBP-213ENST00000611963 UPK3BQ9BT76 320 aa5.44□□□□□ -1.54
TARDBP-213ENST00000611963 KMT2AQ03164 3969 aa5.43□□□□□ -1.54
TARDBP-213ENST00000611963 A0A087WZ39 114 aa5.43□□□□□ -1.54
TARDBP-213ENST00000611963 KRTAP4-8A0A0G2JLE6 195 aa5.43□□□□□ -1.54
TARDBP-213ENST00000611963 COX7A2LO14548 114 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms