RNA–Protein interactions for RNA: ENST00000611107.1

SNCA-212, Transcript of synuclein alpha, humanhuman

TSL 5 BASIC

Gene SNCA, Length 297 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-212ENST00000611107 NPSP0C0P6 89 aa5.61□□□□□ -1.51
SNCA-212ENST00000611107 LINC00614P0C842 121 aa5.61□□□□□ -1.51
SNCA-212ENST00000611107 SS18Q15532 418 aa5.61□□□□□ -1.51
SNCA-212ENST00000611107 CD164L2Q6UWJ8 174 aa5.61□□□□□ -1.51
SNCA-212ENST00000611107 TEX43Q6ZNM6 134 aa5.61□□□□□ -1.51
SNCA-212ENST00000611107 C1orf196B1AJZ1 125 aa5.6□□□□□ -1.51
SNCA-212ENST00000611107 EPM2AB3EWF7 344 aa5.6□□□□□ -1.51
SNCA-212ENST00000611107 HBDP02042 147 aa5.6□□□□□ -1.51
SNCA-212ENST00000611107 SLPIP03973 132 aa5.6□□□□□ -1.51
SNCA-212ENST00000611107 G0S2P27469 103 aa5.6□□□□□ -1.51
SNCA-212ENST00000611107 UBE2D1P51668 147 aa5.6□□□□□ -1.51
SNCA-212ENST00000611107 C14orf177Q52M58 125 aa5.6□□□□□ -1.51
SNCA-212ENST00000611107 PDZD11Q5EBL8 140 aa5.6□□□□□ -1.51
SNCA-212ENST00000611107 Q6ZN92 141 aa5.6□□□□□ -1.51
SNCA-212ENST00000611107 ERASQ7Z444 233 aa5.6□□□□□ -1.51
SNCA-212ENST00000611107 SCGB3A1Q96QR1 104 aa5.6□□□□□ -1.51
SNCA-212ENST00000611107 GVQW2A0A096LPI5 108 aaPredicted RBP5.59□□□□□ -1.51
SNCA-212ENST00000611107 IGHV3OR16-9A0A0B4J2B5 98 aa5.59□□□□□ -1.51
SNCA-212ENST00000611107 LINC01549A6NIU2 74 aa5.59□□□□□ -1.51
SNCA-212ENST00000611107 KRTAP10-4P60372 401 aaPredicted RBP5.59□□□□□ -1.51
SNCA-212ENST00000611107 RAB5BP61020 215 aa5.59□□□□□ -1.51
SNCA-212ENST00000611107 LINC00242Q5T6M2 205 aa5.59□□□□□ -1.51
SNCA-212ENST00000611107 SCXQ7RTU7 201 aa5.59□□□□□ -1.51
SNCA-212ENST00000611107 CHCHD1Q96BP2 118 aaKnown RBP5.59□□□□□ -1.51
SNCA-212ENST00000611107 HERC1Q15751 4861 aa5.59□□□□□ -1.52
SNCA-212ENST00000611107 hDV102S1A0JD36 115 aa5.58□□□□□ -1.52
SNCA-212ENST00000611107 HIST1H2BKO60814 126 aa5.58□□□□□ -1.52
SNCA-212ENST00000611107 SERF1AO75920 110 aa5.58□□□□□ -1.52
SNCA-212ENST00000611107 HIST1H2BJP06899 126 aa5.58□□□□□ -1.52
SNCA-212ENST00000611107 HIST1H2BOP23527 126 aa5.58□□□□□ -1.52
SNCA-212ENST00000611107 HIST1H2BBP33778 126 aa5.58□□□□□ -1.52
SNCA-212ENST00000611107 HIST1H2BDP58876 126 aa5.58□□□□□ -1.52
SNCA-212ENST00000611107 HIST1H2BCP62807 126 aa5.58□□□□□ -1.52
SNCA-212ENST00000611107 COX6A2Q02221 97 aa5.58□□□□□ -1.52
SNCA-212ENST00000611107 HIST2H2BEQ16778 126 aa5.58□□□□□ -1.52
SNCA-212ENST00000611107 HIGD2BQ4VC39 106 aa5.58□□□□□ -1.52
SNCA-212ENST00000611107 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.58□□□□□ -1.52
SNCA-212ENST00000611107 FAM19A3Q7Z5A8 133 aa5.58□□□□□ -1.52
SNCA-212ENST00000611107 BAGE3Q86Y29 109 aa5.58□□□□□ -1.52
SNCA-212ENST00000611107 HIST1H2BHQ93079 126 aa5.58□□□□□ -1.52
SNCA-212ENST00000611107 HIST1H2BNQ99877 126 aa5.58□□□□□ -1.52
SNCA-212ENST00000611107 HIST1H2BMQ99879 126 aa5.58□□□□□ -1.52
SNCA-212ENST00000611107 C2orf88Q9BSF0 95 aa5.58□□□□□ -1.52
SNCA-212ENST00000611107 VCX2Q9H322 139 aa5.58□□□□□ -1.52
SNCA-212ENST00000611107 SRRM2Q9UQ35 2752 aaKnown RBP5.58□□□□□ -1.52
SNCA-212ENST00000611107 LRP1Q07954 4544 aaKnown RBP5.57□□□□□ -1.52
SNCA-212ENST00000611107 IGHV1-58A0A0C4DH39 117 aa5.57□□□□□ -1.52
SNCA-212ENST00000611107 COX7A2LO14548 114 aa5.57□□□□□ -1.52
SNCA-212ENST00000611107 NUPR1O60356 82 aa5.57□□□□□ -1.52
SNCA-212ENST00000611107 INAFM2P0DMQ5 153 aa5.57□□□□□ -1.52
SNCA-212ENST00000611107 PAPPA-AS1Q5QFB9 102 aa5.57□□□□□ -1.52
SNCA-212ENST00000611107 C5orf38Q86SI9 138 aa5.57□□□□□ -1.52
SNCA-212ENST00000611107 FAM19A2Q8N3H0 131 aa5.57□□□□□ -1.52
SNCA-212ENST00000611107 LINC00526Q96FQ7 95 aa5.57□□□□□ -1.52
SNCA-212ENST00000611107 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.56□□□□□ -1.52
SNCA-212ENST00000611107 HSBP1O75506 76 aa5.56□□□□□ -1.52
SNCA-212ENST00000611107 CNBPP62633 177 aaKnown RBP5.56□□□□□ -1.52
SNCA-212ENST00000611107 PMVKQ15126 192 aa5.56□□□□□ -1.52
SNCA-212ENST00000611107 CIRBP-AS1Q8TBR5 109 aa5.56□□□□□ -1.52
SNCA-212ENST00000611107 CST9LQ9H4G1 147 aa5.56□□□□□ -1.52
SNCA-212ENST00000611107 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.56□□□□□ -1.52
SNCA-212ENST00000611107 FAT3Q8TDW7 4589 aa5.55□□□□□ -1.52
SNCA-212ENST00000611107 IGLV4-69A0A075B6H9 119 aa5.55□□□□□ -1.52
SNCA-212ENST00000611107 A0A087WZ39 114 aa5.55□□□□□ -1.52
SNCA-212ENST00000611107 A0A0J9YXV3 536 aa5.55□□□□□ -1.52
SNCA-212ENST00000611107 ATP5LO75964 103 aa5.55□□□□□ -1.52
SNCA-212ENST00000611107 HERVK_113P63121 156 aa5.55□□□□□ -1.52
SNCA-212ENST00000611107 CFAP161Q6P656 301 aa5.55□□□□□ -1.52
SNCA-212ENST00000611107 LINC00528Q8N1L1 170 aa5.55□□□□□ -1.52
SNCA-212ENST00000611107 IGHV3-64A0A075B6Q5 118 aa5.54□□□□□ -1.52
SNCA-212ENST00000611107 IGLV5-45A0A087WSX0 123 aa5.54□□□□□ -1.52
SNCA-212ENST00000611107 IGLC3P0DOY3 106 aa5.54□□□□□ -1.52
SNCA-212ENST00000611107 MALP21145 153 aa5.54□□□□□ -1.52
SNCA-212ENST00000611107 HNRNPA3P51991 378 aaKnown RBP5.54□□□□□ -1.52
SNCA-212ENST00000611107 SPAG11BQ08648 103 aa5.54□□□□□ -1.52
SNCA-212ENST00000611107 SDIM1Q6ZPB5 146 aa5.54□□□□□ -1.52
SNCA-212ENST00000611107 C9orf163Q8N9P6 203 aa5.54□□□□□ -1.52
SNCA-212ENST00000611107 OR10D4PQ8NGN7 298 aa5.54□□□□□ -1.52
SNCA-212ENST00000611107 ORAOV1Q8WV07 137 aa5.54□□□□□ -1.52
SNCA-212ENST00000611107 IFI27L1Q96BM0 104 aa5.54□□□□□ -1.52
SNCA-212ENST00000611107 CHAC1Q9BUX1 264 aa5.54□□□□□ -1.52
SNCA-212ENST00000611107 CDKN2A-AS1Q9UH64 79 aa5.54□□□□□ -1.52
SNCA-212ENST00000611107 TINCRA0A1B0GVN0 87 aa5.53□□□□□ -1.52
SNCA-212ENST00000611107 APOMO95445 188 aa5.53□□□□□ -1.52
SNCA-212ENST00000611107 CHTF8P0CG12 524 aa5.53□□□□□ -1.52
SNCA-212ENST00000611107 DMBT1Q9UGM3 2413 aaPredicted RBP5.53□□□□□ -1.52
SNCA-212ENST00000611107 SMIM1B2RUZ4 78 aa5.52□□□□□ -1.53
SNCA-212ENST00000611107 ZNF561-AS1K7EIQ3 104 aa5.52□□□□□ -1.53
SNCA-212ENST00000611107 ZNF22P17026 224 aaPredicted RBP5.52□□□□□ -1.53
SNCA-212ENST00000611107 NDUFA6P56556 154 aa5.52□□□□□ -1.53
SNCA-212ENST00000611107 SEC11AP67812 179 aa5.52□□□□□ -1.53
SNCA-212ENST00000611107 KIAA0087Q14695 138 aa5.52□□□□□ -1.53
SNCA-212ENST00000611107 COA6Q5JTJ3 125 aaKnown RBP5.52□□□□□ -1.53
SNCA-212ENST00000611107 LINC01561Q8N1V8 128 aa5.52□□□□□ -1.53
SNCA-212ENST00000611107 LINC00469Q8N7U9 141 aa5.52□□□□□ -1.53
SNCA-212ENST00000611107 CARD19Q96LW7 228 aa5.52□□□□□ -1.53
SNCA-212ENST00000611107 GEMIN7Q9H840 131 aaKnown RBP5.52□□□□□ -1.53
SNCA-212ENST00000611107 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.51□□□□□ -1.53
SNCA-212ENST00000611107 TRAV12-1A0A0B4J245 112 aa5.51□□□□□ -1.53
SNCA-212ENST00000611107 C11orf86A6NJI1 115 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms